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KJC3_012034-T2, KJC3_012034-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012034-T2
Unique NameKJC3_012034-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2376373..2377290-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012034-T2 ID=KJC3_012034-T2|Name=KJC3_012034-T2|organism=Aspergillus niger KJC3|type=mRNA|length=918bp|location=Sequence derived from alignment at ch8:2376373..2377290- (Aspergillus niger KJC3)
TACTCTTACTGAGACTTGAGCTTCCCTCTTTATAATCTTCAATATTAGAT
CATATTTGTTTCATTTTTCTGGCTGAGTGTGTTCTTCCACTTCTAGCCTC
TGCGCCGTCTATTTCTGAACATACTTTCTGTCTTGTTGCCGGTTTTCTGG
CTGAGTATAGTATATTGCGTCATGGTATGAGTGTAACCACTGACTCCCGT
TTGAGTTGAGAGTAACAGATAGCAGGGCGGACTTAAGGAAGACATAGCAT
TTGACCCGCCTTGCCATCCACGAGCTGTAGGTCACAGACAGAACATTCTT
TTGGTGCATGACTGACAATTGCCAGTGTGCCATACAAGGTGATTACCACC
ATACAACATCCAGGTGCAGAAATGTCACTGATTCTTGCAGCATGTCTCAC
GAAGAACTCGTACCAGGAGGAGAAATGCCAGTCCCAGATCAATGCCCTCT
ATGAGTGCTGTAATGCCTTCTACAAGGCGCGAGGAGAGGACGCAAAGACT
CCAAGCTGTCCCAAGCCCAACTTGCTGCGTCTGAAGATGAAGCAACGGGG
CATGGAGCCTTAGCTTGCATTGGTAAGGGTTTTCGTGTCTTAACAGAGAT
CTACGGATCGTTGTACATACTACCATTCATACTTTCGTCGTCCATAGAGT
AGAGACCAATTCATCAAGGTCCTTAGAACGTGTCCGGTCGTTGCCGAAAG
ACAGTGGCAGTGATAGTCTTAGTAGTCAGTCCATCTCAGATAAATCTGAA
GCTGGAATGTGACAATTCCCTTGCAGTCTGAGCTCCCATGCTGAGTAAAG
AGCTAGGCTAGTTGTGAAAATTGCCAAATTTCTCTAAGACAATCTTGAGC
ACGCAAAGAGGCCGATTGACCTGAACGAAGATTGAAGCGCTCGTTCCGAG
ACTCTAATGATTGCCTAT
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Coding sequence (CDS) from alignment at ch8:2376373..2377290-

>KJC3_012034-T2 ID=KJC3_012034-T2|Name=KJC3_012034-T2|organism=Aspergillus niger KJC3|type=CDS|length=192bp|location=Sequence derived from alignment at ch8:2376373..2377290- (Aspergillus niger KJC3)
ATGTCACTGATTCTTGCAGCATGTCTCACGAAGAACTCGTACCAGGAGGA
GAAATGCCAGTCCCAGATCAATGCCCTCTATGAGTGCTGTAATGCCTTCT
ACAAGGCGCGAGGAGAGGACGCAAAGACTCCAAGCTGTCCCAAGCCCAAC
TTGCTGCGTCTGAAGATGAAGCAACGGGGCATGGAGCCTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012034KJC3_012034Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012034-T2KJC3_012034-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012034-T2.cdsKJC3_012034-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012034-T2.utr3p1KJC3_012034-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012034-T2.exon2KJC3_012034-T2.exon2Aspergillus niger KJC3exon
KJC3_012034-T2.exon1KJC3_012034-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012034-T2.utr5p2KJC3_012034-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012034-T2.utr5p1KJC3_012034-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009069
DBxrefInterPro:IPR027179
DBxrefPFAM:PF08991
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2376373..2377290 -
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