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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2748972..2750438+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012155-T1 ID=KJC3_012155-T1|Name=KJC3_012155-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1467bp|location=Sequence derived from alignment at ch8:2748972..2750438+ (Aspergillus niger KJC3)
ATTCCCTCGTTGACCCAATCGCATCGTGGTCCTGTCGCTTTCGATAGGTT
CCTCGGCGATATACTATCGGTGCTGCTCATCCTCAGATCTTGCTCTGCTG
TCGCTGCAACAGCCACGTCATTCGTTGTGATCGCCCTCCGGTAAAAGGAG
GGGTCGTGCTCTTTGGCTCATCTGGAAACCCGCCCGTCGTTGTGGAGACC
GGTTGGATCCGCCCATCTCGTGCATGTTATCAGTCGACCCAAACAATCGG
ACATCACACAACCCTCTTTCGTCTGTTGAGTCCAGGTGTGTGTGTGATAT
TCAAGATGGGTTTTGGCGATTTCGATTCGTTATGCGAGAAGGCTCCTTTG
CCGCTCTGCTCCCTGGTGGGTCCACCATCTTCAATATCGGGCTCGACGGG
CATCATACCAAATTGTTATGCGCGAAACATTGAACTGGCCAATACCATCA
TCTTCGAAGGGGCCTCCTGCTTCCTTCACATCATCGCGCTGGGGATGACC
GTGATTATGATTTTGCATATCCGGTCCAAGTTCACTGCTGTTGGTAAGTG
TCCTCACATTATGTCTCTATGTGTCGCGTTGCTGGAGTCAAGTGGCCCCC
CGAGAACCGAACATCATTTACCAACATCATGTTATCACAGGTCGCAAAGA
AATTATTACGTTCTTTTACATTTACATGGCTCTGACCCTATGTTCCCTGA
TCCTTGATGCAGGGGTTGTTCCACCTGGAAGTAGCCCATTTCCATACTTT
GCAGCAGTGCAAAATGGGCTGGCGTCGGCGCTATGCACATCCCTGCTCAT
CAACGGATTTGTTGGTTTCCAACTCTACGAGGACGGAACAATCCTTTCAG
TCTGGCTTCTTCGGCTTTCTTCCGCGGCGATGTTTGTCATCTCTTTCCTT
GTCTCTCTCGCAACCTTCAAGGCATGGGGAGGCCTGGGTCCCACTAACAC
AGTTGGCATGTTTGTCGTTCTGTATATCCTGAACGCCATCTGCATCGCCG
TGTATCTGGTGATGTCACTGTTACTGGTAATGAACACCCTTGAGGACCGC
TGGCCTCTCGGTCACATCGCTTTTGGTCTTGTGGTCTTCATCTGTGGTCA
GGTGCTCCTTTACGCATTCAGTGACACCATCTGCGATAGCGTGCAACATT
ACATGGACGGTCTTTTCTTCGCCACGTTCTGTAACCTCTTGGCGGTCATG
ATGGTGTACAAGGTACGTATTTCCATCATTGTTCCAGAAGACTAAAACCC
TGCAAGGTTTCTGACACGCACCCCTGTCTAGTTCTGGGACTACATTACGA
AAGAAGATCTCGAGTTTTCCGTCGGGATCAAGCCCAACACCTGGGAGGTC
AAGGAACTCCTCCCGGATGAGGATCGCCGGCAGACAGGTTACTACGCTGA
TGCAAATTCGGAGTATGCCGGGAGCATGTATCATCATCGGACATCGACCT
ATCACGGCCATAACTAG back to topCoding sequence (CDS) from alignment at ch8:2748972..2750438+ >KJC3_012155-T1 ID=KJC3_012155-T1|Name=KJC3_012155-T1|organism=Aspergillus niger KJC3|type=CDS|length=2988bp|location=Sequence derived from alignment at ch8:2748972..2750438+ (Aspergillus niger KJC3)
ATGGGTTTTGGCGATTTCGATTCGTTATGCGAGAAGGCTCCTTTGCCGCT
CTGCTCCCTGGTGGGTCCACCATCTTCAATATCGGGCTCGACGGGCATCA
TACCAAATTGTTATGCGCGAAACATTGAACTGGCCAATACCATCATCTTC
GAAGGGGCCTCCTGCTTCCTTCACATCATCGCGCTGGGGATGACCGTGAT
TATGATTTTGCATATCCGGTCCAAGTTCACTGCTGTTGGTCGCAAAGAAA
TTATTACGTTCTTTTACATTTACATGGCTCTGACCCTATGTTCCCTGATC
CTTGATGCAGGGGTTGTTCCACCTGGAAGTAGCCCATTTCCATACTTTGC
AGCAGTGCAAAATGGGCTGGCGTCGGCGCTATGCACATCCCTGCTCATCA
ACGGATTTGTTGGTTTCCAACTCTACGAGGACGGAACAATCCTTTCAGTC
TGGCTTCTTCGGCTTTCTTCCGCGGCGATGTTTGTCATCTCTTTCCTTGT
CTCTCTCGCAACCTTCAAGGCATGGGGAGGCCTGGGTCCCACTAACACAG
TTGGCATGTTTGTCGTTCTGTATATCCTGAACGCCATCTGCATCGCCGTG
TATCTGGTGATGTCACTGTTACTGGTAATGAACACCCTTGAGGACCGCTG
GCCTCTCGGTCACATCGCTTTTGGTCTTGTGGTCTTCATCTGTGGTCAGG
TGCTCCTTTACGCATTCAGTGACACCATCTGCGATAGCGTGCAACATTAC
ATGGACGGTCTTTTCTTCGCCACGTTCTGTAACCTCTTGGCGGTCATGAT
GGTGTACAAGTTCTGGGACTACATTACGAAAGAAGATCTCGAGTTTTCCG
TCGGGATCAAGCCCAACACCTGGGAGGTCAAGGAACTCCTCCCGGATGAG
GATCGCCGGCAGACAGGTTACTACGCTGATGCAAATTCGGAGTATGCCGG
GAGCATGTATCATCATCGGACATCGACCTATCACGGCCATAACTAGATGG
GTTTTGGCGATTTCGATTCGTTATGCGAGAAGGCTCCTTTGCCGCTCTGC
TCCCTGGTGGGTCCACCATCTTCAATATCGGGCTCGACGGGCATCATACC
AAATTGTTATGCGCGAAACATTGAACTGGCCAATACCATCATCTTCGAAG
GGGCCTCCTGCTTCCTTCACATCATCGCGCTGGGGATGACCGTGATTATG
ATTTTGCATATCCGGTCCAAGTTCACTGCTGTTGGTCGCAAAGAAATTAT
TACGTTCTTTTACATTTACATGGCTCTGACCCTATGTTCCCTGATCCTTG
ATGCAGGGGTTGTTCCACCTGGAAGTAGCCCATTTCCATACTTTGCAGCA
GTGCAAAATGGGCTGGCGTCGGCGCTATGCACATCCCTGCTCATCAACGG
ATTTGTTGGTTTCCAACTCTACGAGGACGGAACAATCCTTTCAGTCTGGC
TTCTTCGGCTTTCTTCCGCGGCGATGTTTGTCATCTCTTTCCTTGTCTCT
CTCGCAACCTTCAAGGCATGGGGAGGCCTGGGTCCCACTAACACAGTTGG
CATGTTTGTCGTTCTGTATATCCTGAACGCCATCTGCATCGCCGTGTATC
TGGTGATGTCACTGTTACTGGTAATGAACACCCTTGAGGACCGCTGGCCT
CTCGGTCACATCGCTTTTGGTCTTGTGGTCTTCATCTGTGGTCAGGTGCT
CCTTTACGCATTCAGTGACACCATCTGCGATAGCGTGCAACATTACATGG
ACGGTCTTTTCTTCGCCACGTTCTGTAACCTCTTGGCGGTCATGATGGTG
TACAAGTTCTGGGACTACATTACGAAAGAAGATCTCGAGTTTTCCGTCGG
GATCAAGCCCAACACCTGGGAGGTCAAGGAACTCCTCCCGGATGAGGATC
GCCGGCAGACAGGTTACTACGCTGATGCAAATTCGGAGTATGCCGGGAGC
ATGTATCATCATCGGACATCGACCTATCACGGCCATAACTAGATGGGTTT
TGGCGATTTCGATTCGTTATGCGAGAAGGCTCCTTTGCCGCTCTGCTCCC
TGGTGGGTCCACCATCTTCAATATCGGGCTCGACGGGCATCATACCAAAT
TGTTATGCGCGAAACATTGAACTGGCCAATACCATCATCTTCGAAGGGGC
CTCCTGCTTCCTTCACATCATCGCGCTGGGGATGACCGTGATTATGATTT
TGCATATCCGGTCCAAGTTCACTGCTGTTGGTCGCAAAGAAATTATTACG
TTCTTTTACATTTACATGGCTCTGACCCTATGTTCCCTGATCCTTGATGC
AGGGGTTGTTCCACCTGGAAGTAGCCCATTTCCATACTTTGCAGCAGTGC
AAAATGGGCTGGCGTCGGCGCTATGCACATCCCTGCTCATCAACGGATTT
GTTGGTTTCCAACTCTACGAGGACGGAACAATCCTTTCAGTCTGGCTTCT
TCGGCTTTCTTCCGCGGCGATGTTTGTCATCTCTTTCCTTGTCTCTCTCG
CAACCTTCAAGGCATGGGGAGGCCTGGGTCCCACTAACACAGTTGGCATG
TTTGTCGTTCTGTATATCCTGAACGCCATCTGCATCGCCGTGTATCTGGT
GATGTCACTGTTACTGGTAATGAACACCCTTGAGGACCGCTGGCCTCTCG
GTCACATCGCTTTTGGTCTTGTGGTCTTCATCTGTGGTCAGGTGCTCCTT
TACGCATTCAGTGACACCATCTGCGATAGCGTGCAACATTACATGGACGG
TCTTTTCTTCGCCACGTTCTGTAACCTCTTGGCGGTCATGATGGTGTACA
AGTTCTGGGACTACATTACGAAAGAAGATCTCGAGTTTTCCGTCGGGATC
AAGCCCAACACCTGGGAGGTCAAGGAACTCCTCCCGGATGAGGATCGCCG
GCAGACAGGTTACTACGCTGATGCAAATTCGGAGTATGCCGGGAGCATGT
ATCATCATCGGACATCGACCTATCACGGCCATAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012155-T1.utr5p1 | KJC3_012155-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022057 |
| DBxref | PFAM:PF12271 |
| Product | class 7 |
| Product | Chitin synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2748972..2750438 + |
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