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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2909032..2911904+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012218-T1 ID=KJC3_012218-T1|Name=KJC3_012218-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2873bp|location=Sequence derived from alignment at ch8:2909032..2911904+ (Aspergillus niger KJC3) CGTTTTTAAACCTTTTCTCTCCCTCATCTTCCTTCTTCTCTCTTCCTCCC
ACTTCCTTTCCCTTCCCCCCCTCCTCCACCTCCCTGCCCATTGAACAGAA
TTTTCCCTCTCCTTCCCTCTCTCCCTCCCCTGTTTCTTTCTTTTCTATCT
TGCGCGTCAATCGCGCACACTCCCCTGTCAGCATGGATATGAACCATTTA
ATAGGGTCAGTGTTCTATGCCACTACTGGTCTGAACCAGGGTTTGTGCGG
CTAGGCGGGAGTTAACACCTGGCAGTCAGCGTTTCAACCTGATCTCCAAG
AGTGACATTCGGTATGTTCGATCTTTCCCTCCCTTGGCTTTTGGCCTTGG
CTACAGCTGCTTCGTCATCGCACCTGGCTCCCCCCCGGATTATACTAATA
CTGACTTGACCTTGTCAGTTATGTTGGAACGTTGCATGAGATCAATCCTG
AAGCCTCCACCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGT
CGTCGAGGCAATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGA
ATATATTGTCTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGG
ACACGAAGGAGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCC
GCCATCTTAGGGGTAAGTTTATCAACTCACAACTTCATTCCAAACCTTGC
CTGCCCTTTGAGTGCTTTGCGTCCACGGACTTGTTCCGTATGGACACTCG
ATCAAATGATGAAATATTTCGGATGTAAACTCACAGACCTGTTCCGAATT
GCGCAAACAATTCATGTGGATATTTTCCGTTGCCTTCCTTCTGAATGATC
GAGAAGCAAAGCACTCTTAATCTTGCCTTGTCACACATATTCTCTTTCTC
AAGCCATGATACTAATTAAGTTTCATGAAAACAGAGTATGTCTCGTCCGG
GACCTACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGT
CCGGCGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCC
TCCATATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTT
TTCCTAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCG
GGTCAAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTAT
TGGACCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTAC
CTGGCGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTT
GGTGACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCC
TGGAGTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCAT
CTGTAACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCT
CCGACTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCA
GCCGGCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAA
GCAATCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCT
CAGGCGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGC
GGCTATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATG
GAGAAGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCG
TATGAGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGG
CGGTCACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTG
ATACGGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGAC
CTGGTCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGAC
TGCTTCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATT
CCGTGGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGC
GAGGCTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGA
ATGGCGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTA
GCGTTGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGC
TATGGTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGG
AGGCCTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCC
AGACATAGGCGAACCCTCGTCTGACCATACTTATTCTTCCATGTTGAAAC
TTATTACCATGCGTTTAGCGTTTTGAGTGGCTTTGTCTTTTTACTTTTCT
TATCTTGCTTTTCTTTGTGCGCTTTGGGGAGTATTGAAATCCTTCCACAA
CTTTCTGCTTCTGATATCCCTGGCGTCTGATGGAGCATCCTACGAGTACT
TGAGCTTGGCATTGTACATGTCGGGACATTTCGGATTGTGATTGGGATCA
CTATGGGTTACGGTGGGATTGGTGAGCTTCGTGGCTGAAAGGCTACGGTT
GCATCTGGTGTCAAATTTGGCGTTAAATAGTCGCATGGGTTGGTCGTGGG
CCTCCTTTGCCTTGCTTGTCTGGACGATGATCATGTCTTCTTTCTTGATG
ATGCCCGCCCGAGGAAAGGGCGAGGCTTTTGCCTGAGTCTGACGCTCCCA
GAAGCTGCTCTGGTGGACTCGAGTCTATGTATCATACTACGAGATGATTC
CCCTTCGCATGCAAAACCCAAAAAAAGGAGGCCAATTGGTCTACCAACAG
CTGTCTTCTGCTCGTAGTTTAGT back to topCoding sequence (CDS) from alignment at ch8:2909032..2911904+ >KJC3_012218-T1 ID=KJC3_012218-T1|Name=KJC3_012218-T1|organism=Aspergillus niger KJC3|type=CDS|length=6708bp|location=Sequence derived from alignment at ch8:2909032..2911904+ (Aspergillus niger KJC3) ATGGATATGAACCATTTAATAGGTCAGCGTTTCAACCTGATCTCCAAGAG TGACATTCGTTATGTTGGAACGTTGCATGAGATCAATCCTGAAGCCTCCA CCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGTCGTCGAGGC AATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGAATATATTGT CTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGGACACGAAGG AGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCCGCCATCTTA GGGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGTCACA ACAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAACCGC AGTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCCCGGT TTCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGCCACC AGGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGCCAGT TCCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCCTCCT CCGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTAAACC CACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCCAGCC GGAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCCGCCC CCTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCAGTAT TCCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACTGGAC CCCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTCCAAG CCACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGAGCAG TGTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGTGCTG CCACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAACGCG CCCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGAGACA GATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGTCATC AGCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACAGTCG AAGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCAACGC CAAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGGTCGC CTGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGAAGCG CCTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTTCTTT CTTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACGGGAG GCCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAATATC GAGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACCGTGG CCGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGACGTG GGTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTCGCAA GCCACCGGCGTGCCTACCCAGACATAGATGGATATGAACCATTTAATAGG TCAGCGTTTCAACCTGATCTCCAAGAGTGACATTCGTTATGTTGGAACGT TGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGTTGTC TCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTGCCCC GTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTAAAAG ACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACCTCCT CAGGTGCCGGATGATCCCGCCATCTTAGGGAGTATGTCTCGTCCGGGACC TACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGTCCGG CGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCCTCCA TATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTTTTCC TAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCGGGTC AAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTATTGGA CCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTACCTGG CGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTTGGTG ACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCCTGGA GTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCATCTGT AACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCTCCGA CTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCAGCCG GCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAAGCAA TCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCTCAGG CGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGCGGCT ATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATGGAGA AGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCGTATG AGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGGCGGT CACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTGATAC GGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGACCTGG TCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGACTGCT TCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATTCCGT GGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGCGAGG CTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGAATGG CGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTAGCGT TGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGCTATG GTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGGAGGC CTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCCAGAC ATAGATGGATATGAACCATTTAATAGGTCAGCGTTTCAACCTGATCTCCA AGAGTGACATTCGTTATGTTGGAACGTTGCATGAGATCAATCCTGAAGCC TCCACCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGTCGTCG AGGCAATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGAATATA TTGTCTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGGACACG AAGGAGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCCGCCAT CTTAGGGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGT CACAACAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAA CCGCAGTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCC CGGTTTCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGC CACCAGGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGC CAGTTCCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCC TCCTCCGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTA AACCCACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCC AGCCGGAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCC GCCCCCTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCA GTATTCCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACT GGACCCCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTC CAAGCCACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGA GCAGTGTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGT GCTGCCACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAA CGCGCCCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGA GACAGATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGT CATCAGCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACA GTCGAAGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCA ACGCCAAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGG TCGCCTGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGA AGCGCCTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTT CTTTCTTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACG GGAGGCCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAA TATCGAGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACC GTGGCCGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGA CGTGGGTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTC GCAAGCCACCGGCGTGCCTACCCAGACATAGATGGATATGAACCATTTAA TAGGTCAGCGTTTCAACCTGATCTCCAAGAGTGACATTCGTTATGTTGGA ACGTTGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGT TGTCTCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTG CCCCGTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTA AAAGACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACC TCCTCAGGTGCCGGATGATCCCGCCATCTTAGGGAGTATGTCTCGTCCGG GACCTACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGT CCGGCGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCC TCCATATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTT TTCCTAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCG GGTCAAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTAT TGGACCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTAC CTGGCGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTT GGTGACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCC TGGAGTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCAT CTGTAACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCT CCGACTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCA GCCGGCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAA GCAATCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCT CAGGCGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGC GGCTATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATG GAGAAGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCG TATGAGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGG CGGTCACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTG ATACGGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGAC CTGGTCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGAC TGCTTCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATT CCGTGGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGC GAGGCTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGA ATGGCGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTA GCGTTGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGC TATGGTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGG AGGCCTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCC AGACATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012218-T1.utr5p1 | KJC3_012218-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012218-T1.utr3p1 | KJC3_012218-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR010920 |
DBxref | InterPro:IPR025761 |
DBxref | InterPro:IPR025768 |
DBxref | InterPro:IPR025762 |
DBxref | InterPro:IPR025609 |
DBxref | InterPro:IPR019050 |
DBxref | PFAM:PF12701 |
DBxref | PFAM:PF09532 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:2909032..2911904 + |
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