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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3288303..3290801- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012345-T1 ID=KJC3_012345-T1|Name=KJC3_012345-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2499bp|location=Sequence derived from alignment at ch8:3288303..3290801- (Aspergillus niger KJC3)
ATGAACTACCAATCCATCACCATGGCAGGCAATGCCTCCAACAGCGACCA
TCCGGAGGATGGAGCAGTCCGAGATGGCTCTCCGCTAACATCCTCGGTCG
ACTTTGGTGACCGGTCAGCCTACGCCGATGATGCCCGCTCCTCCGCAACC
TCCCCGCAAAGCTTCACCACGCGCTCCCTGCTCGTCGGCCTTCTTATCGG
CGCTCTCATCACCTTCTCCAATACATACTTTGGATTGCAGACAGGATGGA
TCAGCACTATGGCCATGCCATCTGCCCTAATCGGCTTCTCCGTCTTCAAG
GTCTTTTCCAAATACCTGTCGTATCCGTTTACACCCATCGAGAACGTCCT
CATACAAACAGTAGCAGGAGCGGTGGGGACCATGCCGCTGGGCTGTGGGT
TTGTCGGGGTCATCCCGGCATTGGAATTTCTGATCAAAGATGGCGAAGAT
GGCCCATCGGGGGATGGTGGTACCGGGGAAGGCGGACCTCTGAAGCTGAA
CTTTTGGAAGCTCGTTCTCTGGAGCTTGGGTGTCTGTCTGTTTGGCGTCG
TGTTCGCTGTTCCGCTCAGGAAGGAGGTGATCGTTCGGGAAAAGTTGAAG
TTCCCGAGTGGAACAGCCTCAGCGCTGATGCTGAGGGTGCTGCACGGAAG
TGGTCAGGGCGACGAGAAGTCGAAGAAGCGAGTGGATGACGTCGAGGGTG
TCATACGGCGTGAGGAGAGATCCTACGCATCGACTTTGGCGCATGAACCC
GAGGAAACCGGCGTTTTGCTGAGAAATGCTAGCTCTGGCGATGAGAATAG
TGTCCAAGAGGACTGGAGATCCAAGATGCGTCTCCTGGTGGGCGCCTTCG
CGGTGTCCGGCATTTATGTAGGGCTCGTTGTCTGGGAACATTGGGACTCT
AACTGACAACATGGCCAGACCCTTTTCTCCTATTTCGTCCCCCAAGTCCG
TGATATTCCTATCCTGGGACTTTATCTCGCCAAAAACTGGCTCTGGACCC
TTAATCCGTCTCCCGCATATGTTGGCCAGGGCATTATCATGGGACCTTCG
ACCTGTATGCATATGCTCTTCGGTGCGTTCTTGGGCTGGGGTATTCTTTC
GCCGCTTGCAAAGGCCCGCGGATGGGCCCCGGGGCCTGTGGACAGCTGGG
AAGATGGAAGTAAGGCTTGGATCGTCTGGATCTCACTGGCCATTATGCTT
GCCGACTCCCTTGTCAGTCTTGGCTGGCTGGTCGTGAGGCCTCTTATACC
CCGTGCTTCGCATATGAAAGACAAGCTCCTCCACAGCCGCGCTGGACGGC
GGGTTCTATCTGGAGGCTCGACATCTTCCAATCATCACTCGTACATCTCC
TATTCTGCCCTGAGTCCCATCACGGAGGAGTCTTCTGTGCCGAGCCATCC
CGTCCCTTCCATCGGGAGACACAGCGCAATTGACGAGGCGGATGAAGATG
CGCCTCCATCCCAGCTGATTTCTAACCGGACAGTCATCATCCTCCTCCCA
CTTACTTTGATCCTTAACGTTGTCTGCATGCACTTCGTATTCGGCGACAT
AATGTCTCCACTGCTTTCCAGCCTCGCCACCCTGCTGGCGGTCCTCCTTT
CCATCATGGGCGTCCGCGCCCTTGGCGAAACAGACTTGAACCCCGTCTCC
GGAATCAGCAAACTCACCCAGTTGCTCTTCTCCCTGGCTACTCCTGCCTC
TCATTTTTCCCGCCGTACCGCCTTGGTCACCAACCTCCTCGCCGGCGCCG
TATCCGAGTCCGGTGCCCTGCAAGCCGGAGACATGATGCAGGATCTTAAA
ACCGGACATCTCCTTGGTGCCAGCCCCAAGGCCCAATTCTACGGCCAAAT
GATCGGCAGTCTTGTTGGCGCCGTGCTTTCCACCGCCGTCTACAAAATGT
ACGTCAGCGTATACGAAGTCCCCGGTCCGATGTTCCAAACTCCCACCGCA
TACGTCTGGATCTTCACGGCCCGCCTAGTCACCGGCCAAGGCCTCCCTCC
AATGGCATGGCAAGCGTCCCTTGTCGCCGGAATCATCTTCGTAGCCGTCA
CCATCCTCCGCATTGTCGCCTCATCCCCAATCGCCAACGGCGGCCGCAGA
GATGTCACCGCCCCCTGGAAGGATTTTATTCCCGGCGGCATTGCCGTAGC
GGTGGGAATTTTCAACGTTCCATCCTTCACTTTAGCCCGTGCCATCGGCG
GCTTGATTGCCTGGTGGTGGGCCCGGGGACATTCTAACAAAGTCGCCGCC
GGCGGGCCGGACCCGAGCACCGACGACATTCAAACAAATTTGTCCGACTC
ATGGACGGCTGATGGCCGTGCGGGATCCTCATCCGGATTTCATCATCATC
AACCACAACAACACAGTCAGGCGGTCGCGAAGGAGGCGGATTCCGCCTCT
TCATCTGTTGTGGTCCTTGCCTCGGGATTGATTCTTGGCGAGGGCATCAT
TAGTATTGTAAACTTGCTTCTGGCAAGTGGCGGGGTTCCGCATCTTTGA back to topCoding sequence (CDS) from alignment at ch8:3288303..3290801- >KJC3_012345-T1 ID=KJC3_012345-T1|Name=KJC3_012345-T1|organism=Aspergillus niger KJC3|type=CDS|length=4896bp|location=Sequence derived from alignment at ch8:3288303..3290801- (Aspergillus niger KJC3)
ACCCTTTTCTCCTATTTCGTCCCCCAAGTCCGTGATATTCCTATCCTGGG
ACTTTATCTCGCCAAAAACTGGCTCTGGACCCTTAATCCGTCTCCCGCAT
ATGTTGGCCAGGGCATTATCATGGGACCTTCGACCTGTATGCATATGCTC
TTCGGTGCGTTCTTGGGCTGGGGTATTCTTTCGCCGCTTGCAAAGGCCCG
CGGATGGGCCCCGGGGCCTGTGGACAGCTGGGAAGATGGAAGTAAGGCTT
GGATCGTCTGGATCTCACTGGCCATTATGCTTGCCGACTCCCTTGTCAGT
CTTGGCTGGCTGGTCGTGAGGCCTCTTATACCCCGTGCTTCGCATATGAA
AGACAAGCTCCTCCACAGCCGCGCTGGACGGCGGGTTCTATCTGGAGGCT
CGACATCTTCCAATCATCACTCGTACATCTCCTATTCTGCCCTGAGTCCC
ATCACGGAGGAGTCTTCTGTGCCGAGCCATCCCGTCCCTTCCATCGGGAG
ACACAGCGCAATTGACGAGGCGGATGAAGATGCGCCTCCATCCCAGCTGA
TTTCTAACCGGACAGTCATCATCCTCCTCCCACTTACTTTGATCCTTAAC
GTTGTCTGCATGCACTTCGTATTCGGCGACATAATGTCTCCACTGCTTTC
CAGCCTCGCCACCCTGCTGGCGGTCCTCCTTTCCATCATGGGCGTCCGCG
CCCTTGGCGAAACAGACTTGAACCCCGTCTCCGGAATCAGCAAACTCACC
CAGTTGCTCTTCTCCCTGGCTACTCCTGCCTCTCATTTTTCCCGCCGTAC
CGCCTTGGTCACCAACCTCCTCGCCGGCGCCGTATCCGAGTCCGGTGCCC
TGCAAGCCGGAGACATGATGCAGGATCTTAAAACCGGACATCTCCTTGGT
GCCAGCCCCAAGGCCCAATTCTACGGCCAAATGATCGGCAGTCTTGTTGG
CGCCGTGCTTTCCACCGCCGTCTACAAAATGTACGTCAGCGTATACGAAG
TCCCCGGTCCGATGTTCCAAACTCCCACCGCATACGTCTGGATCTTCACG
GCCCGCCTAGTCACCGGCCAAGGCCTCCCTCCAATGGCATGGCAAGCGTC
CCTTGTCGCCGGAATCATCTTCGTAGCCGTCACCATCCTCCGCATTGTCG
CCTCATCCCCAATCGCCAACGGCGGCCGCAGAGATGTCACCGCCCCCTGG
AAGGATTTTATTCCCGGCGGCATTGCCGTAGCGGTGGGAATTTTCAACGT
TCCATCCTTCACTTTAGCCCGTGCCATCGGCGGCTTGATTGCCTGGTGGT
GGGCCCGGGGACATTCTAACAAAGTCGCCGCCGGCGGGCCGGACCCGAGC
ACCGACGACATTCAAACAAATTTGTCCGACTCATGGACGGCTGATGGCCG
TGCGGGATCCTCATCCGGATTTCATCATCATCAACCACAACAACACAGTC
AGGCGGTCGCGAAGGAGGCGGATTCCGCCTCTTCATCTGTTGTGGTCCTT
GCCTCGGGATTGATTCTTGGCGAGGGCATCATTAGTATTGTAAACTTGCT
TCTGGCAAGTGGCGGGGTTCCGCATCTTTGAATGAACTACCAATCCATCA
CCATGGCAGGCAATGCCTCCAACAGCGACCATCCGGAGGATGGAGCAGTC
CGAGATGGCTCTCCGCTAACATCCTCGGTCGACTTTGGTGACCGGTCAGC
CTACGCCGATGATGCCCGCTCCTCCGCAACCTCCCCGCAAAGCTTCACCA
CGCGCTCCCTGCTCGTCGGCCTTCTTATCGGCGCTCTCATCACCTTCTCC
AATACATACTTTGGATTGCAGACAGGATGGATCAGCACTATGGCCATGCC
ATCTGCCCTAATCGGCTTCTCCGTCTTCAAGGTCTTTTCCAAATACCTGT
CGTATCCGTTTACACCCATCGAGAACGTCCTCATACAAACAGTAGCAGGA
GCGGTGGGGACCATGCCGCTGGGCTGTGGGTTTGTCGGGGTCATCCCGGC
ATTGGAATTTCTGATCAAAGATGGCGAAGATGGCCCATCGGGGGATGGTG
GTACCGGGGAAGGCGGACCTCTGAAGCTGAACTTTTGGAAGCTCGTTCTC
TGGAGCTTGGGTGTCTGTCTGTTTGGCGTCGTGTTCGCTGTTCCGCTCAG
GAAGGAGGTGATCGTTCGGGAAAAGTTGAAGTTCCCGAGTGGAACAGCCT
CAGCGCTGATGCTGAGGGTGCTGCACGGAAGTGGTCAGGGCGACGAGAAG
TCGAAGAAGCGAGTGGATGACGTCGAGGGTGTCATACGGCGTGAGGAGAG
ATCCTACGCATCGACTTTGGCGCATGAACCCGAGGAAACCGGCGTTTTGC
TGAGAAATGCTAGCTCTGGCGATGAGAATAGTGTCCAAGAGGACTGGAGA
TCCAAGATGCGTCTCCTGGTGGGCGCCTTCGCGGTGTCCGGCATTTATAC
CCTTTTCTCCTATTTCGTCCCCCAAGTCCGTGATATTCCTATCCTGGGAC
TTTATCTCGCCAAAAACTGGCTCTGGACCCTTAATCCGTCTCCCGCATAT
GTTGGCCAGGGCATTATCATGGGACCTTCGACCTGTATGCATATGCTCTT
CGGTGCGTTCTTGGGCTGGGGTATTCTTTCGCCGCTTGCAAAGGCCCGCG
GATGGGCCCCGGGGCCTGTGGACAGCTGGGAAGATGGAAGTAAGGCTTGG
ATCGTCTGGATCTCACTGGCCATTATGCTTGCCGACTCCCTTGTCAGTCT
TGGCTGGCTGGTCGTGAGGCCTCTTATACCCCGTGCTTCGCATATGAAAG
ACAAGCTCCTCCACAGCCGCGCTGGACGGCGGGTTCTATCTGGAGGCTCG
ACATCTTCCAATCATCACTCGTACATCTCCTATTCTGCCCTGAGTCCCAT
CACGGAGGAGTCTTCTGTGCCGAGCCATCCCGTCCCTTCCATCGGGAGAC
ACAGCGCAATTGACGAGGCGGATGAAGATGCGCCTCCATCCCAGCTGATT
TCTAACCGGACAGTCATCATCCTCCTCCCACTTACTTTGATCCTTAACGT
TGTCTGCATGCACTTCGTATTCGGCGACATAATGTCTCCACTGCTTTCCA
GCCTCGCCACCCTGCTGGCGGTCCTCCTTTCCATCATGGGCGTCCGCGCC
CTTGGCGAAACAGACTTGAACCCCGTCTCCGGAATCAGCAAACTCACCCA
GTTGCTCTTCTCCCTGGCTACTCCTGCCTCTCATTTTTCCCGCCGTACCG
CCTTGGTCACCAACCTCCTCGCCGGCGCCGTATCCGAGTCCGGTGCCCTG
CAAGCCGGAGACATGATGCAGGATCTTAAAACCGGACATCTCCTTGGTGC
CAGCCCCAAGGCCCAATTCTACGGCCAAATGATCGGCAGTCTTGTTGGCG
CCGTGCTTTCCACCGCCGTCTACAAAATGTACGTCAGCGTATACGAAGTC
CCCGGTCCGATGTTCCAAACTCCCACCGCATACGTCTGGATCTTCACGGC
CCGCCTAGTCACCGGCCAAGGCCTCCCTCCAATGGCATGGCAAGCGTCCC
TTGTCGCCGGAATCATCTTCGTAGCCGTCACCATCCTCCGCATTGTCGCC
TCATCCCCAATCGCCAACGGCGGCCGCAGAGATGTCACCGCCCCCTGGAA
GGATTTTATTCCCGGCGGCATTGCCGTAGCGGTGGGAATTTTCAACGTTC
CATCCTTCACTTTAGCCCGTGCCATCGGCGGCTTGATTGCCTGGTGGTGG
GCCCGGGGACATTCTAACAAAGTCGCCGCCGGCGGGCCGGACCCGAGCAC
CGACGACATTCAAACAAATTTGTCCGACTCATGGACGGCTGATGGCCGTG
CGGGATCCTCATCCGGATTTCATCATCATCAACCACAACAACACAGTCAG
GCGGTCGCGAAGGAGGCGGATTCCGCCTCTTCATCTGTTGTGGTCCTTGC
CTCGGGATTGATTCTTGGCGAGGGCATCATTAGTATTGTAAACTTGCTTC
TGGCAAGTGGCGGGGTTCCGCATCTTTGAATGAACTACCAATCCATCACC
ATGGCAGGCAATGCCTCCAACAGCGACCATCCGGAGGATGGAGCAGTCCG
AGATGGCTCTCCGCTAACATCCTCGGTCGACTTTGGTGACCGGTCAGCCT
ACGCCGATGATGCCCGCTCCTCCGCAACCTCCCCGCAAAGCTTCACCACG
CGCTCCCTGCTCGTCGGCCTTCTTATCGGCGCTCTCATCACCTTCTCCAA
TACATACTTTGGATTGCAGACAGGATGGATCAGCACTATGGCCATGCCAT
CTGCCCTAATCGGCTTCTCCGTCTTCAAGGTCTTTTCCAAATACCTGTCG
TATCCGTTTACACCCATCGAGAACGTCCTCATACAAACAGTAGCAGGAGC
GGTGGGGACCATGCCGCTGGGCTGTGGGTTTGTCGGGGTCATCCCGGCAT
TGGAATTTCTGATCAAAGATGGCGAAGATGGCCCATCGGGGGATGGTGGT
ACCGGGGAAGGCGGACCTCTGAAGCTGAACTTTTGGAAGCTCGTTCTCTG
GAGCTTGGGTGTCTGTCTGTTTGGCGTCGTGTTCGCTGTTCCGCTCAGGA
AGGAGGTGATCGTTCGGGAAAAGTTGAAGTTCCCGAGTGGAACAGCCTCA
GCGCTGATGCTGAGGGTGCTGCACGGAAGTGGTCAGGGCGACGAGAAGTC
GAAGAAGCGAGTGGATGACGTCGAGGGTGTCATACGGCGTGAGGAGAGAT
CCTACGCATCGACTTTGGCGCATGAACCCGAGGAAACCGGCGTTTTGCTG
AGAAATGCTAGCTCTGGCGATGAGAATAGTGTCCAAGAGGACTGGAGATC
CAAGATGCGTCTCCTGGTGGGCGCCTTCGCGGTGTCCGGCATTTAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004813 |
| DBxref | PFAM:PF03169 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3288303..3290801 - |
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