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KJC3_012430-T1, KJC3_012430-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012430-T1
Unique NameKJC3_012430-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3555660..3556730+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012430-T1 ID=KJC3_012430-T1|Name=KJC3_012430-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1071bp|location=Sequence derived from alignment at ch8:3555660..3556730+ (Aspergillus niger KJC3)
CCCGACCCGGCGAATTCCTTCATTCACTCCCCATCTTCTGTCACCATGGC
CGCTGAAGAGCAAGATGCTTTGGACGCGCTCGAGCGTGAGGCATCTGACT
TTGTCAAGGTATGACGCTGCGGATTATCTACACTACAATGACACCGAAAC
TAACTTCAGACAGGATGCAGAAATTGACCGCATTCGGAAGGCGTTCTCCT
TAGACGCGTGAGTTATTGGCATTCTACTACGCAGTTTCTAGTAACTACTA
TATAACTTTGGATAGGCTAACTAGCGTATCATTTTACCAGTTACGCGGTC
CTCGATCTCCAACCAGGTGTGCCCGAATCGGACATCAAAGTCCAGTACCG
CAAAAAGTCCCTTCTCATTCACCCTGATAAGACGAAAAACCCAGCCGCCC
CCGATGCCTTTGATCGCCTCAAGAAAGCGCACACGGCGCTTATGGACGAA
AAGTCACGCACATACCTAGACGAATGTATCGCTGACGCACGACGACTCCT
AATCCGCGAACACAAGTACTCGCTAGACTCGGAAGAGCTAAAGACCGACG
AATTCAAGAAGGAATGGCGCCAAAAGACAGTGCAGGTGCTCTTAGAAGAA
GAAGCGCGGCGACGAAGACAGGCCAAGGCCAAGCTTCAGGAAGAAGGTCG
GGAGAGGCGCAAGGAAGAAGAAGAGTTGGAGGCGCGGAAGCGGAAACGAG
ACCAGGATAAAGCGTGGGAAGATAGCCGTGAGGAGCGCATAGGCAGCTGG
CGGGATTGGCAGAAGGGGGTGAAGAAGGATGGAGACAAGAAGAAGAAAAA
GAAGATGAAGGTATTGGGGTGATACTGGACAGTGATGCTAGTTGCCTGCA
AGACTTGCAGTGGTAGAAGTATTGGAACTTGATCAACTGGCGTTGAGCGG
ATATATTTGGACCCGGGACGGACTGGTGATCATAACATCACCATGATTAT
ATTGCTGTTTATCACTACTGTTCTTGCATACCATTGATTATTAGTCGCTG
TCACATTACCATAGCTTATAGCTGTTCACATCATTTATCATCCACACCAA
TAAACTCTTCTGTTTACTTGA
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Coding sequence (CDS) from alignment at ch8:3555660..3556730+

>KJC3_012430-T1 ID=KJC3_012430-T1|Name=KJC3_012430-T1|organism=Aspergillus niger KJC3|type=CDS|length=1917bp|location=Sequence derived from alignment at ch8:3555660..3556730+ (Aspergillus niger KJC3)
ATGGCCGCTGAAGAGCAAGATGCTTTGGACGCGCTCGAGCGTGAGGCATC
TGACTTTGTCAAGGATGCAGAAATTGACCGCATTCGGAAGGCGTTCTCCT
TAGACGCTTACGCGGTCCTCGATCTCCAACCAGGTGTGCCCGAATCGGAC
ATCAAAGTCCAGTACCGCAAAAAGTCCCTTCTCATTCACCCTGATAAGAC
GAAAAACCCAGCCGCCCCCGATGCCTTTGATCGCCTCAAGAAAGCGCACA
CGGCGCTTATGGACGAAAAGTCACGCACATACCTAGACGAATGTATCGCT
GACGCACGACGACTCCTAATCCGCGAACACAAGTACTCGCTAGACTCGGA
AGAGCTAAAGACCGACGAATTCAAGAAGGAATGGCGCCAAAAGACAGTGC
AGGTGCTCTTAGAAGAAGAAGCGCGGCGACGAAGACAGGCCAAGGCCAAG
CTTCAGGAAGAAGGTCGGGAGAGGCGCAAGGAAGAAGAAGAGTTGGAGGC
GCGGAAGCGGAAACGAGACCAGGATAAAGCGTGGGAAGATAGCCGTGAGG
AGCGCATAGGCAGCTGGCGGGATTGGCAGAAGGGGGTGAAGAAGGATGGA
GACAAGAAGAAGAAAAAGAAGATGAAGGTATTGGGGTGAATGGCCGCTGA
AGAGCAAGATGCTTTGGACGCGCTCGAGCGTGAGGCATCTGACTTTGTCA
AGGATGCAGAAATTGACCGCATTCGGAAGGCGTTCTCCTTAGACGCTTAC
GCGGTCCTCGATCTCCAACCAGGTGTGCCCGAATCGGACATCAAAGTCCA
GTACCGCAAAAAGTCCCTTCTCATTCACCCTGATAAGACGAAAAACCCAG
CCGCCCCCGATGCCTTTGATCGCCTCAAGAAAGCGCACACGGCGCTTATG
GACGAAAAGTCACGCACATACCTAGACGAATGTATCGCTGACGCACGACG
ACTCCTAATCCGCGAACACAAGTACTCGCTAGACTCGGAAGAGCTAAAGA
CCGACGAATTCAAGAAGGAATGGCGCCAAAAGACAGTGCAGGTGCTCTTA
GAAGAAGAAGCGCGGCGACGAAGACAGGCCAAGGCCAAGCTTCAGGAAGA
AGGTCGGGAGAGGCGCAAGGAAGAAGAAGAGTTGGAGGCGCGGAAGCGGA
AACGAGACCAGGATAAAGCGTGGGAAGATAGCCGTGAGGAGCGCATAGGC
AGCTGGCGGGATTGGCAGAAGGGGGTGAAGAAGGATGGAGACAAGAAGAA
GAAAAAGAAGATGAAGGTATTGGGGTGAATGGCCGCTGAAGAGCAAGATG
CTTTGGACGCGCTCGAGCGTGAGGCATCTGACTTTGTCAAGGATGCAGAA
ATTGACCGCATTCGGAAGGCGTTCTCCTTAGACGCTTACGCGGTCCTCGA
TCTCCAACCAGGTGTGCCCGAATCGGACATCAAAGTCCAGTACCGCAAAA
AGTCCCTTCTCATTCACCCTGATAAGACGAAAAACCCAGCCGCCCCCGAT
GCCTTTGATCGCCTCAAGAAAGCGCACACGGCGCTTATGGACGAAAAGTC
ACGCACATACCTAGACGAATGTATCGCTGACGCACGACGACTCCTAATCC
GCGAACACAAGTACTCGCTAGACTCGGAAGAGCTAAAGACCGACGAATTC
AAGAAGGAATGGCGCCAAAAGACAGTGCAGGTGCTCTTAGAAGAAGAAGC
GCGGCGACGAAGACAGGCCAAGGCCAAGCTTCAGGAAGAAGGTCGGGAGA
GGCGCAAGGAAGAAGAAGAGTTGGAGGCGCGGAAGCGGAAACGAGACCAG
GATAAAGCGTGGGAAGATAGCCGTGAGGAGCGCATAGGCAGCTGGCGGGA
TTGGCAGAAGGGGGTGAAGAAGGATGGAGACAAGAAGAAGAAAAAGAAGA
TGAAGGTATTGGGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012430KJC3_012430Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012430-T1KJC3_012430-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012430-T1.utr5p1KJC3_012430-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012430-T1.exon1KJC3_012430-T1.exon1Aspergillus niger KJC3exon
KJC3_012430-T1.exon2KJC3_012430-T1.exon2Aspergillus niger KJC3exon
KJC3_012430-T1.exon3KJC3_012430-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012430-T1.cdsKJC3_012430-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012430-T1.utr3p1KJC3_012430-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3555660..3556730 +
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