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KJC3_012656-T1, KJC3_012656-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012656-T1
Unique NameKJC3_012656-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4206155..4207471-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012656-T1 ID=KJC3_012656-T1|Name=KJC3_012656-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1317bp|location=Sequence derived from alignment at ch8:4206155..4207471- (Aspergillus niger KJC3)
ATCTTGCCAAAGACTAAAAAGTCAAGCACAGTACTTCACCAGCCAAGATT
GACTCAACAGCATATCATGAAGAACCGAATCCCCTCCCTAAGGCCTCTCT
GCCACCAGCGAGCGCAAGTCCTCCCCCTCCGTCGCAACCATTCAACAAGC
AAACCTCCGAATGCGCAACCGCAACCGCGGCCGCAGCCCAACAACAAACT
GCAATTCAAAGACATCCCTGCCACAGCAGTGAACTACTACTGGGACACGC
AAGCGCCGGATGAAAGCCAGCTAGCCTACGCGGACAAAGTCTTCGCACCA
TCGCGCCACTCTCCAGTCAAGCTCTGGACTCTGAGCAAGTTCCGCACGAC
GCCGCTCTCCTCGACGACCCCGGAAGTAGCGTTCCTAGGTCGGTCGAATG
TTGGCAAAAGCTCCTTGTTGAATGCCCTCATGGGGCAGGAGATATGCTGG
ACGTCGTCGAAACCAGGGCGCACGCAGACGATGAACGCATTCGGAATTGG
AGGGACAAAGGGCGGCGAGTCGAAGGTAGTATTGCTTGATATGCCGGGGT
ACGGCAAGGGAAGTCGATCAGAATGGGGGGCTGAGATTATGAAGTACTTA
AAGAATAGGAAGCAGTGAGTATTACCAAATGGCATATATCACACTGGGAT
ACAGGCTAACAAACTGTCTACGTCTATAGACTCCGCCGCACCTTCATCCT
AATCGACGGCCAGCACGGCATCAAGCACTCCGACGAAGGCATCCTCGAAT
TATTCCGCCACTACGCCATCCCACACCAGATTATCGTCTCAAAAGTGGAT
AACATCATGGCGGCGAGAACGAGCCAGCTCGCGACGGGAGTAACGGAGGA
ACGTCTGCTCCAGACGCAGAAGAAGATACAGGAGCTGCGTCCTATCATCC
AGCCTGTTGGTCGGGATGAAGGTCCTGGTGCTCTAGGCGAGATTTTGACA
TGCAGTTCGAAAGTCCTCAGAACTCCTGGGAATTATTTGGGAATTAGTCC
CATTCGGTGGGCTATCTTGTCTGCTGCTGGCTATGATGGGACGATGGAGG
TGAGGTCTAGTCATGGCCAACCTGATTTGACGGGGGTGAGTATGTCCTCT
GGGGCTGGTCCTTGAGGAGGCTCAGTGCCTTTTTGTCTGTTTGAAATGAT
AGCGGGGTGCTCTCCAGTTTTCTGAGAGCTATACAGATGCTCTATCTCTG
TGAGGGGCCGTGAGAAGAGATTGGCTCTCTCGATCATAAGTGGCTGAGCC
TGTAGAGGTTACTCTGTTGTTTGTGGTGACTAAAACCACTCTAGGTGATC
AAGTAGGTCACCATCTG
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Coding sequence (CDS) from alignment at ch8:4206155..4207471-

>KJC3_012656-T1 ID=KJC3_012656-T1|Name=KJC3_012656-T1|organism=Aspergillus niger KJC3|type=CDS|length=1968bp|location=Sequence derived from alignment at ch8:4206155..4207471- (Aspergillus niger KJC3)
ACTCCGCCGCACCTTCATCCTAATCGACGGCCAGCACGGCATCAAGCACT
CCGACGAAGGCATCCTCGAATTATTCCGCCACTACGCCATCCCACACCAG
ATTATCGTCTCAAAAGTGGATAACATCATGGCGGCGAGAACGAGCCAGCT
CGCGACGGGAGTAACGGAGGAACGTCTGCTCCAGACGCAGAAGAAGATAC
AGGAGCTGCGTCCTATCATCCAGCCTGTTGGTCGGGATGAAGGTCCTGGT
GCTCTAGGCGAGATTTTGACATGCAGTTCGAAAGTCCTCAGAACTCCTGG
GAATTATTTGGGAATTAGTCCCATTCGGTGGGCTATCTTGTCTGCTGCTG
GCTATGATGGGACGATGGAGGTGAGGTCTAGTCATGGCCAACCTGATTTG
ACGGGGGTGAGTATGTCCTCTGGGGCTGGTCCTTGAATGAAGAACCGAAT
CCCCTCCCTAAGGCCTCTCTGCCACCAGCGAGCGCAAGTCCTCCCCCTCC
GTCGCAACCATTCAACAAGCAAACCTCCGAATGCGCAACCGCAACCGCGG
CCGCAGCCCAACAACAAACTGCAATTCAAAGACATCCCTGCCACAGCAGT
GAACTACTACTGGGACACGCAAGCGCCGGATGAAAGCCAGCTAGCCTACG
CGGACAAAGTCTTCGCACCATCGCGCCACTCTCCAGTCAAGCTCTGGACT
CTGAGCAAGTTCCGCACGACGCCGCTCTCCTCGACGACCCCGGAAGTAGC
GTTCCTAGGTCGGTCGAATGTTGGCAAAAGCTCCTTGTTGAATGCCCTCA
TGGGGCAGGAGATATGCTGGACGTCGTCGAAACCAGGGCGCACGCAGACG
ATGAACGCATTCGGAATTGGAGGGACAAAGGGCGGCGAGTCGAAGGTAGT
ATTGCTTGATATGCCGGGGTACGGCAAGGGAAGTCGATCAGAATGGGGGG
CTGAGATTATGAAGTACTTAAAGAATAGGAAGCAACTCCGCCGCACCTTC
ATCCTAATCGACGGCCAGCACGGCATCAAGCACTCCGACGAAGGCATCCT
CGAATTATTCCGCCACTACGCCATCCCACACCAGATTATCGTCTCAAAAG
TGGATAACATCATGGCGGCGAGAACGAGCCAGCTCGCGACGGGAGTAACG
GAGGAACGTCTGCTCCAGACGCAGAAGAAGATACAGGAGCTGCGTCCTAT
CATCCAGCCTGTTGGTCGGGATGAAGGTCCTGGTGCTCTAGGCGAGATTT
TGACATGCAGTTCGAAAGTCCTCAGAACTCCTGGGAATTATTTGGGAATT
AGTCCCATTCGGTGGGCTATCTTGTCTGCTGCTGGCTATGATGGGACGAT
GGAGGTGAGGTCTAGTCATGGCCAACCTGATTTGACGGGGGTGAGTATGT
CCTCTGGGGCTGGTCCTTGAATGAAGAACCGAATCCCCTCCCTAAGGCCT
CTCTGCCACCAGCGAGCGCAAGTCCTCCCCCTCCGTCGCAACCATTCAAC
AAGCAAACCTCCGAATGCGCAACCGCAACCGCGGCCGCAGCCCAACAACA
AACTGCAATTCAAAGACATCCCTGCCACAGCAGTGAACTACTACTGGGAC
ACGCAAGCGCCGGATGAAAGCCAGCTAGCCTACGCGGACAAAGTCTTCGC
ACCATCGCGCCACTCTCCAGTCAAGCTCTGGACTCTGAGCAAGTTCCGCA
CGACGCCGCTCTCCTCGACGACCCCGGAAGTAGCGTTCCTAGGTCGGTCG
AATGTTGGCAAAAGCTCCTTGTTGAATGCCCTCATGGGGCAGGAGATATG
CTGGACGTCGTCGAAACCAGGGCGCACGCAGACGATGAACGCATTCGGAA
TTGGAGGGACAAAGGGCGGCGAGTCGAAGGTAGTATTGCTTGATATGCCG
GGGTACGGCAAGGGAAGTCGATCAGAATGGGGGGCTGAGATTATGAAGTA
CTTAAAGAATAGGAAGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012656KJC3_012656Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012656-T1KJC3_012656-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012656-T1.cdsKJC3_012656-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012656-T1.utr3p1KJC3_012656-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012656-T1.exon2KJC3_012656-T1.exon2Aspergillus niger KJC3exon
KJC3_012656-T1.exon1KJC3_012656-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012656-T1.utr5p1KJC3_012656-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR030393
DBxrefInterPro:IPR019987
DBxrefInterPro:IPR006073
DBxrefPFAM:PF01926
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4206155..4207471 -
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