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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4839127..4840680- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012882-T1 ID=KJC3_012882-T1|Name=KJC3_012882-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1554bp|location=Sequence derived from alignment at ch8:4839127..4840680- (Aspergillus niger KJC3)
CGGGTATATAAAAGCTATCTGTGTATCATCTAATTATAATGAATCTAAGA
TGCCCTCTGCCGAGTCATCTCTTCATACTCCCAATATCTTCCCGATCGAG
TAATGCTAGCTAAACCTAAATAGGAATAGTAATTTGAGATTAAAAGGTTC
TGACCAACCATCAGAATCGTTCAATATCCACTCATAAGCACTAACTGCTT
CCTGCTTAGTGCGAGAGTCAGCTGCAGGGGCCAGGGACCGTTTGCCAAAT
CGGGAAATCGTGTATAGCCTCCAGGATCATGGCGGCAAATATCACAATGC
TGGAAGGCATGAAAACCTCTCACTTTTGCACTGTTTCATTCGCCCAAAAC
TCCGCTGGAAATGCATAAAAGGCGACTTGATTCCACAGCCTCTTCGACTC
CCATCTTCCATACCATCATCACTCATTCACAATGTCCCAATCTGATTCCT
TTCTCAGCCTTCAAGGCAAAGTAGCCCTCATTACCGGATCTGGTAAAACG
AGAGGCATTGGTGCCGCAATTGCCACTCTCCTGGCCCACCACGGTGCAGC
GGTTATCCTCAACTATGTCTCACCGTCCACAGGCCCTTCCGCTGCCACCG
TGGCGCAGAGCATCACCGCGGCGGGCGGACAGGCCCTGGCCGTACAGGCG
GACATCTCCCGACCTGACGAAGCACAGAAGCTTGTGCAAGCAGCAGTCAA
TGCCTTTGGAAGGCTTGATATCCTAGGTTTGTCCACGAACACCTCCGCCT
CCCTGGCTTGGACGCTTGCTGACGAGGACCAGTCAACAACGCGGCCACTG
GCACTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGCTCTTGCGACCACC
TTTGCTGTCAATGTCTTTGGTCCAATCTACCTCATGCAGGAAGCAGTGAA
GCACATGCCGCCACGCAGTCGAGTCATCAACATCGGATCGGTGGCGTCCA
AGTTGGGAATTTCAGGATCCCCAGTCTATAGCGCCTCAAAGGCGGCGATG
GATGCGCTGACGTTTTCCATGGCAATGGAGGTAAGCTGGGCTCTAATGTG
GGAACCCACACGGGACGTGTGCTAATTGGTGTCTAGCTTGGTCGCAATCA
TGGCGGCATAACCATCAACACAGTTTCCCCCGGTCCGGTAGATACAGATG
GTCTACCGCCTCAGGTGGCGGAAAAGATCAACAAGACAATGGTTCCCATG
AGCCGAGTCGAGGAGCGATTGGGAACCGTGCAGGATATCGCGGACGCAGT
GCTGTTGTTGTGCTCGGAGAAGAGTCGCTGGATCTCCGGACAGGTCATTT
CCGTCAGTGGTGGAATTGTGGGTGGCTAGGATGCGATGGCTATGAACATG
AGGATGTCTTGAGCACTGGGAGAAAAGGATGATAGGCATCCAGAATGTTA
ATGGACAGGATGTTTTCGACAAGATCAGTTCCTTCCTTGCTACCCATGCC
GAGAAGGTCCAGCAAGGACCGGATATCGTCAAGATACAACCCTGGCTGGG
TAGAATGAGAAAGTCGAGACACTGTTACAAGAACCCAGAGATGCAGTTTC
AGAC back to topCoding sequence (CDS) from alignment at ch8:4839127..4840680- >KJC3_012882-T1 ID=KJC3_012882-T1|Name=KJC3_012882-T1|organism=Aspergillus niger KJC3|type=CDS|length=2358bp|location=Sequence derived from alignment at ch8:4839127..4840680- (Aspergillus niger KJC3)
CTTGGTCGCAATCATGGCGGCATAACCATCAACACAGTTTCCCCCGGTCC
GGTAGATACAGATGGTCTACCGCCTCAGGTGGCGGAAAAGATCAACAAGA
CAATGGTTCCCATGAGCCGAGTCGAGGAGCGATTGGGAACCGTGCAGGAT
ATCGCGGACGCAGTGCTGTTGTTGTGCTCGGAGAAGAGTCGCTGGATCTC
CGGACAGGTCATTTCCGTCAGTGGTGGAATTGTGGGTGGCTAGTCAACAA
CGCGGCCACTGGCACTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGCTC
TTGCGACCACCTTTGCTGTCAATGTCTTTGGTCCAATCTACCTCATGCAG
GAAGCAGTGAAGCACATGCCGCCACGCAGTCGAGTCATCAACATCGGATC
GGTGGCGTCCAAGTTGGGAATTTCAGGATCCCCAGTCTATAGCGCCTCAA
AGGCGGCGATGGATGCGCTGACGTTTTCCATGGCAATGGAGATGTCCCAA
TCTGATTCCTTTCTCAGCCTTCAAGGCAAAGTAGCCCTCATTACCGGATC
TGGTAAAACGAGAGGCATTGGTGCCGCAATTGCCACTCTCCTGGCCCACC
ACGGTGCAGCGGTTATCCTCAACTATGTCTCACCGTCCACAGGCCCTTCC
GCTGCCACCGTGGCGCAGAGCATCACCGCGGCGGGCGGACAGGCCCTGGC
CGTACAGGCGGACATCTCCCGACCTGACGAAGCACAGAAGCTTGTGCAAG
CAGCAGTCAATGCCTTTGGAAGGCTTGATATCCTAGCTTGGTCGCAATCA
TGGCGGCATAACCATCAACACAGTTTCCCCCGGTCCGGTAGATACAGATG
GTCTACCGCCTCAGGTGGCGGAAAAGATCAACAAGACAATGGTTCCCATG
AGCCGAGTCGAGGAGCGATTGGGAACCGTGCAGGATATCGCGGACGCAGT
GCTGTTGTTGTGCTCGGAGAAGAGTCGCTGGATCTCCGGACAGGTCATTT
CCGTCAGTGGTGGAATTGTGGGTGGCTAGTCAACAACGCGGCCACTGGCA
CTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGCTCTTGCGACCACCTTT
GCTGTCAATGTCTTTGGTCCAATCTACCTCATGCAGGAAGCAGTGAAGCA
CATGCCGCCACGCAGTCGAGTCATCAACATCGGATCGGTGGCGTCCAAGT
TGGGAATTTCAGGATCCCCAGTCTATAGCGCCTCAAAGGCGGCGATGGAT
GCGCTGACGTTTTCCATGGCAATGGAGATGTCCCAATCTGATTCCTTTCT
CAGCCTTCAAGGCAAAGTAGCCCTCATTACCGGATCTGGTAAAACGAGAG
GCATTGGTGCCGCAATTGCCACTCTCCTGGCCCACCACGGTGCAGCGGTT
ATCCTCAACTATGTCTCACCGTCCACAGGCCCTTCCGCTGCCACCGTGGC
GCAGAGCATCACCGCGGCGGGCGGACAGGCCCTGGCCGTACAGGCGGACA
TCTCCCGACCTGACGAAGCACAGAAGCTTGTGCAAGCAGCAGTCAATGCC
TTTGGAAGGCTTGATATCCTAGCTTGGTCGCAATCATGGCGGCATAACCA
TCAACACAGTTTCCCCCGGTCCGGTAGATACAGATGGTCTACCGCCTCAG
GTGGCGGAAAAGATCAACAAGACAATGGTTCCCATGAGCCGAGTCGAGGA
GCGATTGGGAACCGTGCAGGATATCGCGGACGCAGTGCTGTTGTTGTGCT
CGGAGAAGAGTCGCTGGATCTCCGGACAGGTCATTTCCGTCAGTGGTGGA
ATTGTGGGTGGCTAGTCAACAACGCGGCCACTGGCACTCCAGGACCGGTA
CTCAGCGCTGCGCCTGAAGCTCTTGCGACCACCTTTGCTGTCAATGTCTT
TGGTCCAATCTACCTCATGCAGGAAGCAGTGAAGCACATGCCGCCACGCA
GTCGAGTCATCAACATCGGATCGGTGGCGTCCAAGTTGGGAATTTCAGGA
TCCCCAGTCTATAGCGCCTCAAAGGCGGCGATGGATGCGCTGACGTTTTC
CATGGCAATGGAGATGTCCCAATCTGATTCCTTTCTCAGCCTTCAAGGCA
AAGTAGCCCTCATTACCGGATCTGGTAAAACGAGAGGCATTGGTGCCGCA
ATTGCCACTCTCCTGGCCCACCACGGTGCAGCGGTTATCCTCAACTATGT
CTCACCGTCCACAGGCCCTTCCGCTGCCACCGTGGCGCAGAGCATCACCG
CGGCGGGCGGACAGGCCCTGGCCGTACAGGCGGACATCTCCCGACCTGAC
GAAGCACAGAAGCTTGTGCAAGCAGCAGTCAATGCCTTTGGAAGGCTTGA
TATCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012882-T1.utr3p1 | KJC3_012882-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012882-T1.utr5p1 | KJC3_012882-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4839127..4840680 - |
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