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KJC3_012912-T1, KJC3_012912-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012912-T1
Unique NameKJC3_012912-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4934423..4935721+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012912-T1 ID=KJC3_012912-T1|Name=KJC3_012912-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1299bp|location=Sequence derived from alignment at ch8:4934423..4935721+ (Aspergillus niger KJC3)
GTAAATTTAAAATGGATGCTCATGGGAAGAGACCTAACCTTTGAAGATTC
ATTGAATTCCCATGGTTTTGCTACCTTACCTGCTGATTTTGCTGGGCAAA
TTTCCGATCTGCATATATGGCGTCTCCAAAGTCAAAAGTACTACTTCTTG
GTAGCGGTGGCGTTGGTACTATTGCTGCTTTGAATCTCGAGATTGGAGGT
CTGGCTCAGGTCACGTCTGTCTTGCGGTCTAATTATGCGGCAGTGAGTCT
CCTGGGATTTACAATCAAGTCTTGTGAACACGGAGAAATCCAGAATTGGC
GGCCATCTGAAAGTCAGTCAGCCCTCTATTCTTCAACCTAGCCTACACCT
CCTTACCCTTCATTAAGTTGAAGACCGTTCCTTGCTGTCGCTAATACCAT
AGCTTTTTGATGCAATAGTCCTCAATAATGTTCCCAGCGTTGCGGACTCG
GTCACTGTCCGACCCTTTGACTACGTCGTGTGCTGCACAAAAAATGTTCC
CGATGTCTCGCCCACTGTGTGTGAAATTATCGCTCCTGCAATCTCGCCCG
GTCACACGGTAATCGTCCTTGTACAAAATGGCTTAAATATTGAGAAACCC
TTCCTCCGCAGATTCCCATCTAATATCATACTGTCCGGTGTCAGTCGCAT
AGATGCTCATGAGGTCGCCCCCGGTATTATAGAACAGAGACAGAAGGACA
TCCTGTATGTTGGGGCGTTTGAAAACTGCCTCATACCTTACGAAGAGCAG
CAAAAGGCAGCTCAACACTTCGCCAAAATCTACAGTGCGGGGTTGAAGAC
AAACTGTTCCTACAAACCGAACGTGCGTTATGATCGTTGGGTTAAGTTGG
TCAACAATGCCTCGTTCAACCCAATTTGTGCCCTGACGGGTTTAACGACG
GGCGAGTTGCAGCGGACATCTGGGGCCGTTGACAAGTTGCTTATTCCCGC
GATGAAAGAGATCATATCTGTGGCCGAAGCAGATGGTTACTCGCTTCCAG
GAGTTATAATAAAGGAGACCATTCAGAGTAACCCACCAGAGGAGGATATA
TCCCCTAGCATGTTGGTGGACATACAAAAAGTATGTTAGCTTTCTATCTG
TGTATCGGACTGATTTTACTAAAAAATCCCATGTCAGGGCAATTTCATCG
AGCACGAAAATATTCTGGGGGAAGTCATTCGCGAGGCCAGAAAGGGCGAG
GGGGTAACAACACCTATTCTATCCACCTTGTACGAGTTATGCTGCATGGT
TCAATGGAGGACCAAGAAGGAAATGGGCCGGCTTGAGCCTGGAATGTGA
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Coding sequence (CDS) from alignment at ch8:4934423..4935721+

>KJC3_012912-T1 ID=KJC3_012912-T1|Name=KJC3_012912-T1|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch8:4934423..4935721+ (Aspergillus niger KJC3)
ATGGCGTCTCCAAAGTCAAAAGTACTACTTCTTGGTAGCGGTGGCGTTGG
TACTATTGCTGCTTTGAATCTCGAGATTGGAGGTCTGGCTCAGGTCACGT
CTGTCTTGCGGTCTAATTATGCGGCAGTGAGTCTCCTGGGATTTACAATC
AAGTCTTGTGAACACGGAGAAATCCAGAATTGGCGGCCATCTGAAATCCT
CAATAATGTTCCCAGCGTTGCGGACTCGGTCACTGTCCGACCCTTTGACT
ACGTCGTGTGCTGCACAAAAAATGTTCCCGATGTCTCGCCCACTGTGTGT
GAAATTATCGCTCCTGCAATCTCGCCCGGTCACACGGTAATCGTCCTTGT
ACAAAATGGCTTAAATATTGAGAAACCCTTCCTCCGCAGATTCCCATCTA
ATATCATACTGTCCGGTGTCAGTCGCATAGATGCTCATGAGGTCGCCCCC
GGTATTATAGAACAGAGACAGAAGGACATCCTGTATGTTGGGGCGTTTGA
AAACTGCCTCATACCTTACGAAGAGCAGCAAAAGGCAGCTCAACACTTCG
CCAAAATCTACAGTGCGGGGTTGAAGACAAACTGTTCCTACAAACCGAAC
GTGCGTTATGATCGTTGGGTTAAGTTGGTCAACAATGCCTCGTTCAACCC
AATTTGTGCCCTGACGGGTTTAACGACGGGCGAGTTGCAGCGGACATCTG
GGGCCGTTGACAAGTTGCTTATTCCCGCGATGAAAGAGATCATATCTGTG
GCCGAAGCAGATGGTTACTCGCTTCCAGGAGTTATAATAAAGGAGACCAT
TCAGAGTAACCCACCAGAGGAGGATATATCCCCTAGCATGTTGGTGGACA
TACAAAAAGGCAATTTCATCGAGCACGAAAATATTCTGGGGGAAGTCATT
CGCGAGGCCAGAAAGGGCGAGGGGGTAACAACACCTATTCTATCCACCTT
GTACGAGTTATGCTGCATGGTTCAATGGAGGACCAAGAAGGAAATGGGCC
GGCTTGAGCCTGGAATGTGAATGGCGTCTCCAAAGTCAAAAGTACTACTT
CTTGGTAGCGGTGGCGTTGGTACTATTGCTGCTTTGAATCTCGAGATTGG
AGGTCTGGCTCAGGTCACGTCTGTCTTGCGGTCTAATTATGCGGCAGTGA
GTCTCCTGGGATTTACAATCAAGTCTTGTGAACACGGAGAAATCCAGAAT
TGGCGGCCATCTGAAATCCTCAATAATGTTCCCAGCGTTGCGGACTCGGT
CACTGTCCGACCCTTTGACTACGTCGTGTGCTGCACAAAAAATGTTCCCG
ATGTCTCGCCCACTGTGTGTGAAATTATCGCTCCTGCAATCTCGCCCGGT
CACACGGTAATCGTCCTTGTACAAAATGGCTTAAATATTGAGAAACCCTT
CCTCCGCAGATTCCCATCTAATATCATACTGTCCGGTGTCAGTCGCATAG
ATGCTCATGAGGTCGCCCCCGGTATTATAGAACAGAGACAGAAGGACATC
CTGTATGTTGGGGCGTTTGAAAACTGCCTCATACCTTACGAAGAGCAGCA
AAAGGCAGCTCAACACTTCGCCAAAATCTACAGTGCGGGGTTGAAGACAA
ACTGTTCCTACAAACCGAACGTGCGTTATGATCGTTGGGTTAAGTTGGTC
AACAATGCCTCGTTCAACCCAATTTGTGCCCTGACGGGTTTAACGACGGG
CGAGTTGCAGCGGACATCTGGGGCCGTTGACAAGTTGCTTATTCCCGCGA
TGAAAGAGATCATATCTGTGGCCGAAGCAGATGGTTACTCGCTTCCAGGA
GTTATAATAAAGGAGACCATTCAGAGTAACCCACCAGAGGAGGATATATC
CCCTAGCATGTTGGTGGACATACAAAAAGGCAATTTCATCGAGCACGAAA
ATATTCTGGGGGAAGTCATTCGCGAGGCCAGAAAGGGCGAGGGGGTAACA
ACACCTATTCTATCCACCTTGTACGAGTTATGCTGCATGGTTCAATGGAG
GACCAAGAAGGAAATGGGCCGGCTTGAGCCTGGAATGTGAATGGCGTCTC
CAAAGTCAAAAGTACTACTTCTTGGTAGCGGTGGCGTTGGTACTATTGCT
GCTTTGAATCTCGAGATTGGAGGTCTGGCTCAGGTCACGTCTGTCTTGCG
GTCTAATTATGCGGCAGTGAGTCTCCTGGGATTTACAATCAAGTCTTGTG
AACACGGAGAAATCCAGAATTGGCGGCCATCTGAAATCCTCAATAATGTT
CCCAGCGTTGCGGACTCGGTCACTGTCCGACCCTTTGACTACGTCGTGTG
CTGCACAAAAAATGTTCCCGATGTCTCGCCCACTGTGTGTGAAATTATCG
CTCCTGCAATCTCGCCCGGTCACACGGTAATCGTCCTTGTACAAAATGGC
TTAAATATTGAGAAACCCTTCCTCCGCAGATTCCCATCTAATATCATACT
GTCCGGTGTCAGTCGCATAGATGCTCATGAGGTCGCCCCCGGTATTATAG
AACAGAGACAGAAGGACATCCTGTATGTTGGGGCGTTTGAAAACTGCCTC
ATACCTTACGAAGAGCAGCAAAAGGCAGCTCAACACTTCGCCAAAATCTA
CAGTGCGGGGTTGAAGACAAACTGTTCCTACAAACCGAACGTGCGTTATG
ATCGTTGGGTTAAGTTGGTCAACAATGCCTCGTTCAACCCAATTTGTGCC
CTGACGGGTTTAACGACGGGCGAGTTGCAGCGGACATCTGGGGCCGTTGA
CAAGTTGCTTATTCCCGCGATGAAAGAGATCATATCTGTGGCCGAAGCAG
ATGGTTACTCGCTTCCAGGAGTTATAATAAAGGAGACCATTCAGAGTAAC
CCACCAGAGGAGGATATATCCCCTAGCATGTTGGTGGACATACAAAAAGG
CAATTTCATCGAGCACGAAAATATTCTGGGGGAAGTCATTCGCGAGGCCA
GAAAGGGCGAGGGGGTAACAACACCTATTCTATCCACCTTGTACGAGTTA
TGCTGCATGGTTCAATGGAGGACCAAGAAGGAAATGGGCCGGCTTGAGCC
TGGAATGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012912KJC3_012912Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012912-T1.utr5p1KJC3_012912-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012912-T1.exon1KJC3_012912-T1.exon1Aspergillus niger KJC3exon
KJC3_012912-T1.exon2KJC3_012912-T1.exon2Aspergillus niger KJC3exon
KJC3_012912-T1.exon3KJC3_012912-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012912-T1.cdsKJC3_012912-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012912-T1KJC3_012912-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR013332
DBxrefInterPro:IPR013752
DBxrefPFAM:PF08546
DBxrefPFAM:PF02558
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4934423..4935721 +
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