You are here

Home

M747DRAFT_365873-T1, M747DRAFT_365873-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_365873-T1
Unique NameM747DRAFT_365873-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:342141..343723+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_365873-T1 ID=M747DRAFT_365873-T1|Name=M747DRAFT_365873-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1583bp|location=Sequence derived from alignment at KZ851899.1:342141..343723+ (Aspergillus niger ATCC 13496)
ATGTACGACTCTCTTCCTAGCTACCGGGAGACCTCTTCCGCGCACACTCA
TGAAGAGGAACATACGCCACTACTTCCCAAGCAGGTCGACCCCGACCCCG
ACTCCAAAAGCGCAAAATCGTCGGTTTCCTTTCTGGTCGAATTTTTCCGG
CTGTTGAAGGACTCCATACCAGTCATTCTGGCATACACGCTGCAAAACAG
CCTACAAACCACCTCGGTGTTGATTGTGGGACGGACCTCTCCGGAGAACC
TGGCCACCACAGCTTTCTCACTGATGTTTGCCATGGTCACGGCATGGATG
ATCGCCTTAGGCGGGACCACCGCATTGGACACACTAGCCTCCTCAACGTT
CACAGGCAGCTCGAATAAGCATGATCTCGGAATTCTGTTGCAGCGGGCAT
TCTTTGTCCTCGGCCTGTTCTATGTCCCCGTTGCAATTCTTTGGACATGC
TCGGAGCCTGTGTTTCTTCTGCTTGGCCAGGACCCCCAGCTTTCACGGGA
TAGTGCGCGTTTCCTAACTTGCTTGATCCCTGGCGGTCTGGGTTATATCT
ACTTCGAGGCCATGAAAAAATATCTGCAAGCACAGGGTAAGTCTTTTTCC
GACGTGCTTCTCAGACATCATATCTCTGGGAAGTTTGTTAATGAGAGGAT
ACAGGTATTATGCGCCCTGGGACGTATGTCTTGCTGATTACGGTGCCGTT
TAATGCATTGCTCAATTACCTGTTCTGTTACACCTTTCGCATGGGGTTGC
TTGGTGCGCCATTTGCCACCGGCATTTCCTACTGGCTGTCCTTTGCACTG
CTCGTGTTGTATGCCCGATTCATTGCCGGCTCCGAATGCTGGGGCGGCTG
GTCGCGCAAAGCATTCGAGAATCTTGGGACTTTCGCCCGATTGGCCTTTC
TGGGCGTGGTGCATGTAGGCACCGAGTGGTGGGCCTTTGAGATAGTAGCT
CTTGCAGCCGGAAGGCTGGGAACAATCCCACTGGCGGCTCAGAGCGTCAT
CATGACCGCAGACCAAGTGCTCAACACAATCCCATTTGGCGTGGGAGTCG
CTACATCTTCACGGGTGGGGAGCCTGCTAGGCTCCCGGGATGCAGCTGGT
GCATCGAGAGCGGCCAACACCGCGGCCTGGCTAAGTATGGCGCTGGGAGG
GGCCGTGCTGGCTGTGCTGATGGGGACTCGACACGTCTTTGCAAAGATAT
TCAACTCCGATGAAGGGGTCGTACAGCTCACTGCGGAGGTTCTACCATGG
GTGGCGTTGTTCCAGATCGCCGATGGATTGAACGGTAGCTGTGGAGGAAG
CCTTAGGGGTATGGGAAGACAGCATGTCGGCGCGCTAGTCAACCTGGCCA
GTTATTATTGTGGTGCACTACCTCTAGGTATTTGGCTAGCCTTCAATGGA
TGGGGACTGAAAGGTCTTTGGGTGGGACAGTGCATCGCATTGTATCTTGT
GGGGGCACTGGAGTGGACAATCGTGGCCTTCAGTAACTGGGAAGGCGAGG
TCGATAAGGCGTTTCAGCGAATGGATATCCATGACCGATTGGAGGTTGGA
CACACCACCAATGGTGCCACGACTGTTGTGTAA
back to top

Coding sequence (CDS) from alignment at KZ851899.1:342141..343723+

>M747DRAFT_365873-T1 ID=M747DRAFT_365873-T1|Name=M747DRAFT_365873-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3030bp|location=Sequence derived from alignment at KZ851899.1:342141..343723+ (Aspergillus niger ATCC 13496)
ATGTACGACTCTCTTCCTAGCTACCGGGAGACCTCTTCCGCGCACACTCA
TGAAGAGGAACATACGCCACTACTTCCCAAGCAGGTCGACCCCGACCCCG
ACTCCAAAAGCGCAAAATCGTCGGTTTCCTTTCTGGTCGAATTTTTCCGG
CTGTTGAAGGACTCCATACCAGTCATTCTGGCATACACGCTGCAAAACAG
CCTACAAACCACCTCGGTGTTGATTGTGGGACGGACCTCTCCGGAGAACC
TGGCCACCACAGCTTTCTCACTGATGTTTGCCATGGTCACGGCATGGATG
ATCGCCTTAGGCGGGACCACCGCATTGGACACACTAGCCTCCTCAACGTT
CACAGGCAGCTCGAATAAGCATGATCTCGGAATTCTGTTGCAGCGGGCAT
TCTTTGTCCTCGGCCTGTTCTATGTCCCCGTTGCAATTCTTTGGACATGC
TCGGAGCCTGTGTTTCTTCTGCTTGGCCAGGACCCCCAGCTTTCACGGGA
TAGTGCGCGTTTCCTAACTTGCTTGATCCCTGGCGGTCTGGGTTATATCT
ACTTCGAGGCCATGAAAAAATATCTGCAAGCACAGGGTATTATGCGCCCT
GGGACGTATGTCTTGCTGATTACGGTGCCGTTTAATGCATTGCTCAATTA
CCTGTTCTGTTACACCTTTCGCATGGGGTTGCTTGGTGCGCCATTTGCCA
CCGGCATTTCCTACTGGCTGTCCTTTGCACTGCTCGTGTTGTATGCCCGA
TTCATTGCCGGCTCCGAATGCTGGGGCGGCTGGTCGCGCAAAGCATTCGA
GAATCTTGGGACTTTCGCCCGATTGGCCTTTCTGGGCGTGGTGCATGTAG
GCACCGAGTGGTGGGCCTTTGAGATAGTAGCTCTTGCAGCCGGAAGGCTG
GGAACAATCCCACTGGCGGCTCAGAGCGTCATCATGACCGCAGACCAAGT
GCTCAACACAATCCCATTTGGCGTGGGAGTCGCTACATCTTCACGGGTGG
GGAGCCTGCTAGGCTCCCGGGATGCAGCTGGTGCATCGAGAGCGGCCAAC
ACCGCGGCCTGGCTAAGTATGGCGCTGGGAGGGGCCGTGCTGGCTGTGCT
GATGGGGACTCGACACGTCTTTGCAAAGATATTCAACTCCGATGAAGGGG
TCGTACAGCTCACTGCGGAGGTTCTACCATGGGTGGCGTTGTTCCAGATC
GCCGATGGATTGAACGGTAGCTGTGGAGGAAGCCTTAGGGGTATGGGAAG
ACAGCATGTCGGCGCGCTAGTCAACCTGGCCAGTTATTATTGTGGTGCAC
TACCTCTAGGTATTTGGCTAGCCTTCAATGGATGGGGACTGAAAGGTCTT
TGGGTGGGACAGTGCATCGCATTGTATCTTGTGGGGGCACTGGAGTGGAC
AATCGTGGCCTTCAGTAACTGGGAAGGCGAGGTCGATAAGGCGTTTCAGC
GAATGGATATCCATGACCGATTGGAGGTTGGACACACCACCAATGGTGCC
ACGACTGTTGTGTAAATGTACGACTCTCTTCCTAGCTACCGGGAGACCTC
TTCCGCGCACACTCATGAAGAGGAACATACGCCACTACTTCCCAAGCAGG
TCGACCCCGACCCCGACTCCAAAAGCGCAAAATCGTCGGTTTCCTTTCTG
GTCGAATTTTTCCGGCTGTTGAAGGACTCCATACCAGTCATTCTGGCATA
CACGCTGCAAAACAGCCTACAAACCACCTCGGTGTTGATTGTGGGACGGA
CCTCTCCGGAGAACCTGGCCACCACAGCTTTCTCACTGATGTTTGCCATG
GTCACGGCATGGATGATCGCCTTAGGCGGGACCACCGCATTGGACACACT
AGCCTCCTCAACGTTCACAGGCAGCTCGAATAAGCATGATCTCGGAATTC
TGTTGCAGCGGGCATTCTTTGTCCTCGGCCTGTTCTATGTCCCCGTTGCA
ATTCTTTGGACATGCTCGGAGCCTGTGTTTCTTCTGCTTGGCCAGGACCC
CCAGCTTTCACGGGATAGTGCGCGTTTCCTAACTTGCTTGATCCCTGGCG
GTCTGGGTTATATCTACTTCGAGGCCATGAAAAAATATCTGCAAGCACAG
GGTATTATGCGCCCTGGGACGTATGTCTTGCTGATTACGGTGCCGTTTAA
TGCATTGCTCAATTACCTGTTCTGTTACACCTTTCGCATGGGGTTGCTTG
GTGCGCCATTTGCCACCGGCATTTCCTACTGGCTGTCCTTTGCACTGCTC
GTGTTGTATGCCCGATTCATTGCCGGCTCCGAATGCTGGGGCGGCTGGTC
GCGCAAAGCATTCGAGAATCTTGGGACTTTCGCCCGATTGGCCTTTCTGG
GCGTGGTGCATGTAGGCACCGAGTGGTGGGCCTTTGAGATAGTAGCTCTT
GCAGCCGGAAGGCTGGGAACAATCCCACTGGCGGCTCAGAGCGTCATCAT
GACCGCAGACCAAGTGCTCAACACAATCCCATTTGGCGTGGGAGTCGCTA
CATCTTCACGGGTGGGGAGCCTGCTAGGCTCCCGGGATGCAGCTGGTGCA
TCGAGAGCGGCCAACACCGCGGCCTGGCTAAGTATGGCGCTGGGAGGGGC
CGTGCTGGCTGTGCTGATGGGGACTCGACACGTCTTTGCAAAGATATTCA
ACTCCGATGAAGGGGTCGTACAGCTCACTGCGGAGGTTCTACCATGGGTG
GCGTTGTTCCAGATCGCCGATGGATTGAACGGTAGCTGTGGAGGAAGCCT
TAGGGGTATGGGAAGACAGCATGTCGGCGCGCTAGTCAACCTGGCCAGTT
ATTATTGTGGTGCACTACCTCTAGGTATTTGGCTAGCCTTCAATGGATGG
GGACTGAAAGGTCTTTGGGTGGGACAGTGCATCGCATTGTATCTTGTGGG
GGCACTGGAGTGGACAATCGTGGCCTTCAGTAACTGGGAAGGCGAGGTCG
ATAAGGCGTTTCAGCGAATGGATATCCATGACCGATTGGAGGTTGGACAC
ACCACCAATGGTGCCACGACTGTTGTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0042910xenobiotic transmembrane transporter activity
GO:0015297antiporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_365873M747DRAFT_365873Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_365873-T1.exon1M747DRAFT_365873-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_365873-T1.exon2M747DRAFT_365873-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_365873-T1.cdsM747DRAFT_365873-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_365873-T1M747DRAFT_365873-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002528
DBxrefPFAM:PF01554
ProductMATE efflux family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:342141..343723 +
Powered by Drupal