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M747DRAFT_300589-T1, M747DRAFT_300589-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_300589-T1
Unique NameM747DRAFT_300589-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:559213..560600+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_300589-T1 ID=M747DRAFT_300589-T1|Name=M747DRAFT_300589-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1388bp|location=Sequence derived from alignment at KZ851899.1:559213..560600+ (Aspergillus niger ATCC 13496)
ATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCC
GCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGA
AGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTAT
GAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACT
GCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAG
GCCTCGAGACCTGTATGATCATCGCATCTATTCTGGGCTATATCAGTGTC
AATACTGATGATTTGCTGCAGATGAACCATCCAACGACCAACAAGCACGA
GGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCAA
GGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGGG
TACAGTCACAGGCCGAGCGGGCTTGATGGGTTACACGCATCACTGACGTC
TCCCAGATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAA
ACCACACAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGA
AAGGTATTGCTACAGATCTAGTCGCCTGTCACTCTGGATTCACACTGGTA
TCGAATCCCCGTACTTCATTGATGCTAACCTAGTTTTCTTTTGTCACGAA
TTCAGCTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCGTG
TCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGT
CGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTC
TCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCT
ATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGA
GGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATA
CCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACG
CCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCT
GGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAG
AGAACCCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGACC
GTGATCGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATAGT
TATCGCTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGACAG
GTACGGAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGATG
ATTCGTATGATGACCCCCGTGCGAAGAGAAGATACTGA
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Coding sequence (CDS) from alignment at KZ851899.1:559213..560600+

>M747DRAFT_300589-T1 ID=M747DRAFT_300589-T1|Name=M747DRAFT_300589-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4680bp|location=Sequence derived from alignment at KZ851899.1:559213..560600+ (Aspergillus niger ATCC 13496)
ATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCC
GCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGA
AGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTAT
GAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACT
GCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAG
GCCTCGAGACCTATGAACCATCCAACGACCAACAAGCACGAGGCGACCCG
TTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCAAGGAATCGGA
CCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGGATTCGCATCG
TGAAAGACACCGTAACGCCAAAGGGCTCGAAGAAACCACACAGGGGATAT
GCTTTTATTGTCTATGAGCGCGAAAAGGATATGAAAGCTGCCTACAAGGA
AACGGATGGTATCCGCATCAAGGACCGCCGTGTCTTGGTAGACGTCGAGC
GCGGTCGTACAGTCAAGGGATGGAAGCCTCGTCGCTTTGGTGGTGGTCTT
GGAGGTCGTGGTTACACCAAGGCTTTGCCGTCTCGACCTATCGGCCCTGG
CTCTTTCAACGCCCCCTCTGGTCCCGGCGGCTATGGTGGTGGATTCCGGG
GTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGAGGATTCCGCGGTGACCGT
GGATTTGGTGGGCCCCGCGGGGGTGTTGGATACCAAGGTGGTCGCAACGG
ATTCGGTGGAGGCGGACAGGCTCCCCCCAACGCCCCTTCAGGTCCGGGAG
GCGGACGCAGCGGTGGGTTTGGTGGTCCCCCTGGCGGCGGCAGATTTGAG
CGTGAACCCCGGGGCGCCACTGGCAGCAACAGAGAACCCATCAGGCCCCG
GGACGGGTTTGGCGACCGCGATCGTCGAGACCGTGATCGGGACCGCGACG
GTGACCGTCACCGGGACCGTGATCGGGATAGTTATCGCTACCGTGACCGC
GACCGTGAACGCGACCGCGATCGTGGTGACAGGTACGGAGGCCGGGGCGA
CGACTACGGGCGGAAGCGATACCATGAAGATGATTCGTATGATGACCCCC
GTGCGAAGAGAAGATACTGAATGACGGACAAGCTCCCCCCTCCGCTTCTG
GCGCTCTTCCAACCTCGCCCGCCTCTGCGTTATGTCACCCCCATCAACCG
TGCCCCAGAAGACTGCAAGAAGAGTAGCATCGGTGGTATTGCGCAGTTCC
TTCCTGAGGTGAAGAAGTATGAGGAAGAGATCCCATATACGCCTACGGAA
AGCTGGATCCAGCGCAAACTGCGCCAGAAAGTGGAGAAGAAAGAGAACAT
TAACAAGCAATTGACGGAAGGCCTCGAGACCTATGAACCATCCAACGACC
AACAAGCACGAGGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGC
TACGATGTCAAGGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCC
TATTGAACGGATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGA
AGAAACCACACAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGAT
ATGAAAGCTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCG
TGTCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTC
GTCGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCG
TCTCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGG
CTATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGG
GAGGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGA
TACCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAA
CGCCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCC
CTGGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAAC
AGAGAACCCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGA
CCGTGATCGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATA
GTTATCGCTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGAC
AGGTACGGAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGA
TGATTCGTATGATGACCCCCGTGCGAAGAGAAGATACTGAATGACGGACA
AGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCCGCCTCTGCGT
TATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGAAGAGTAGCAT
CGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTATGAGGAAGAGA
TCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACTGCGCCAGAAA
GTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAGGCCTCGAGAC
CTATGAACCATCCAACGACCAACAAGCACGAGGCGACCCGTTCAAGACGC
TGTTTGTCGCTAGACTGAGCTACGATGTCAAGGAATCGGACCTGGAACGG
GAATTTGGTCGTTTCGGCCCTATTGAACGGATTCGCATCGTGAAAGACAC
CGTAACGCCAAAGGGCTCGAAGAAACCACACAGGGGATATGCTTTTATTG
TCTATGAGCGCGAAAAGGATATGAAAGCTGCCTACAAGGAAACGGATGGT
ATCCGCATCAAGGACCGCCGTGTCTTGGTAGACGTCGAGCGCGGTCGTAC
AGTCAAGGGATGGAAGCCTCGTCGCTTTGGTGGTGGTCTTGGAGGTCGTG
GTTACACCAAGGCTTTGCCGTCTCGACCTATCGGCCCTGGCTCTTTCAAC
GCCCCCTCTGGTCCCGGCGGCTATGGTGGTGGATTCCGGGGTGGGTTCGG
TGGCCGAGGTGGTTTCAAGGGAGGATTCCGCGGTGACCGTGGATTTGGTG
GGCCCCGCGGGGGTGTTGGATACCAAGGTGGTCGCAACGGATTCGGTGGA
GGCGGACAGGCTCCCCCCAACGCCCCTTCAGGTCCGGGAGGCGGACGCAG
CGGTGGGTTTGGTGGTCCCCCTGGCGGCGGCAGATTTGAGCGTGAACCCC
GGGGCGCCACTGGCAGCAACAGAGAACCCATCAGGCCCCGGGACGGGTTT
GGCGACCGCGATCGTCGAGACCGTGATCGGGACCGCGACGGTGACCGTCA
CCGGGACCGTGATCGGGATAGTTATCGCTACCGTGACCGCGACCGTGAAC
GCGACCGCGATCGTGGTGACAGGTACGGAGGCCGGGGCGACGACTACGGG
CGGAAGCGATACCATGAAGATGATTCGTATGATGACCCCCGTGCGAAGAG
AAGATACTGAATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCC
AACCTCGCCCGCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAA
GACTGCAAGAAGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGT
GAAGAAGTATGAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCC
AGCGCAAACTGCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAA
TTGACGGAAGGCCTCGAGACCTATGAACCATCCAACGACCAACAAGCACG
AGGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCA
AGGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGG
ATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAAACCACA
CAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGAAAGCTG
CCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCGTGTCTTGGTA
GACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGTCGCTTTGG
TGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTCTCGACCTA
TCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCTATGGTGGT
GGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGAGGATTCCG
CGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATACCAAGGTG
GTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACGCCCCTTCA
GGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCTGGCGGCGG
CAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAGAGAACCCA
TCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGACCGTGATCGG
GACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATAGTTATCGCTA
CCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGACAGGTACGGAG
GCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGATGATTCGTAT
GATGACCCCCGTGCGAAGAGAAGATACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030619U1 snRNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_300589M747DRAFT_300589Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300589-T1.exon1M747DRAFT_300589-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_300589-T1.exon2M747DRAFT_300589-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_300589-T1.exon3M747DRAFT_300589-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_300589-T1.exon4M747DRAFT_300589-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300589-T1.cdsM747DRAFT_300589-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300589-T1M747DRAFT_300589-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8518991.2
NoteantiSMASH:Cluster_8518991.1
NoteBUSCO:EOG09264G1F
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034143
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR022023
DBxrefInterPro:IPR000504
DBxrefPFAM:PF12220
DBxrefPFAM:PF00076
ProductRNA-binding domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:559213..560600 +
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