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M747DRAFT_291625-T1, M747DRAFT_291625-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_291625-T1
Unique NameM747DRAFT_291625-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1154199..1155375+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_291625-T1 ID=M747DRAFT_291625-T1|Name=M747DRAFT_291625-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1177bp|location=Sequence derived from alignment at KZ851899.1:1154199..1155375+ (Aspergillus niger ATCC 13496)
GCTCCGTCTTCAATCTCATCATCCCCGCTACTTCAATTGGCCTTTCTCCT
CGATCTACTATTTGCTCTACATCAGTCGCTTCGCGCAGCTTCCTTTTCTT
TCGTGCATGATACCCCAATAGAACCCGTTATCGATCCCGCCCGCCACCAT
GCGATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACATTAACCCGC
TCAAAGACCGCGAGCTAGATCTTCGAGGTGCGTTCCAGCCACCAGTCCTG
AAAAGAACAGATACTACACTTTTGAGATGAGCTTGATTGATATCGGTTTT
GTGTTTGAGTCGTATAGGGCACAAGATACCCGCTATTGAGAACTTGGGTA
TTGCCAAGGTAACCTCTTCCCACCACCTCATTTCTCTCTTGGAATGTCTT
CGCGGCATTGTATATGGTATAGAGGCTAAGAAAGGAACGGTAGGACCAAG
ATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTTCCC
TTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCA
GATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTGT
TGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAAT
CTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAA
GGAGGTAAGCTTCCCCTTTTCTTCTATTTCCTTTCCTAGCGAGATCAAAG
CAAAGCAAAGTCTAACATAAATGGTATTGGTGTAGCACTATCGCTACTAC
GTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGAA
GGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCTGAGGAGC
CGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGAT
GTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGGC
GGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATGA
TTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTTG
AATGAGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGATAGTGATGA
GGAGATGCAGACATAGTAGTAGATGGG
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Coding sequence (CDS) from alignment at KZ851899.1:1154199..1155375+

>M747DRAFT_291625-T1 ID=M747DRAFT_291625-T1|Name=M747DRAFT_291625-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3048bp|location=Sequence derived from alignment at KZ851899.1:1154199..1155375+ (Aspergillus niger ATCC 13496)
ATGCGATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACATTAACCC
GCTCAAAGACCGCGAGCTAGATCTTCGAGGGCACAAGATACCCGCTATTG
AGAACTTGGGTATTGCCAAGGACCAAGATGCAATCGACCTAACAGACAAC
GATATCACCTCCCTCGGAAACTTTCCCTTCTTTCCTCGCCTCCGCACCCT
CCTCCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGACGATATCGACCT
CGGTGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAATAACATGAACGAG
TTGGCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGT
GTTGCTGGAGAATCCTGTTACCAGGAAGGAGCACTATCGCTACTACGTCA
TCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGAAGGAC
GCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCTGAGGAGCCGTC
TGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGATGTGC
CCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGGCGGTG
CGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATGATTCG
CGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTTGAATG
AGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGATAGTGATGAGGAG
ATGCAGACATAGATGCGATTGACCGTTGAACTGATCCAAAATTCCCTGTC
CTACATTAACCCGCTCAAAGACCGCGAGCTAGATCTTCGAGGGCACAAGA
TACCCGCTATTGAGAACTTGGGTATTGCCAAGGACCAAGATGCAATCGAC
CTAACAGACAACGATATCACCTCCCTCGGAAACTTTCCCTTCTTTCCTCG
CCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGA
CGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAAT
AACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTT
GACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAAGGAGCACTATC
GCTACTACGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAG
AAAGTGAAGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGC
TGAGGAGCCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCA
CGTTTGATGTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCG
GATAAGGCGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGA
GAAGATGATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGA
AGGAGTTGAATGAGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGAT
AGTGATGAGGAGATGCAGACATAGATGCGATTGACCGTTGAACTGATCCA
AAATTCCCTGTCCTACATTAACCCGCTCAAAGACCGCGAGCTAGATCTTC
GAGGGCACAAGATACCCGCTATTGAGAACTTGGGTATTGCCAAGGACCAA
GATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTTCC
CTTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGC
AGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTG
TTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAA
TCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGA
AGGAGCACTATCGCTACTACGTCATCTGGCGCATCCCCAGCGTCCGCTTC
CTCGACTACCAGAAAGTGAAGGACGCGGAGCGCGAAAAAGCCACCGAGTT
GTTCGGCACAGCTGAGGAGCCGTCTGCGCTGGCGTCTAAGATCATGGGAA
TCAAGTCTCGCACGTTTGATGTGCCCTCGGGCGCAGGGGGTGCGGATCGT
GGTGCGCCCGCGGATAAGGCGGTGCGGGTGAAGTTGACGGAGAAGGAGAG
GAAGAGGGTGGAGAAGATGATTCGCGAGGCGAAGAGTTTGCAGGAGATTT
CGCGGTTGGAGAAGGAGTTGAATGAGGGGAGGATACCTGGAGGTGCATTG
GATTATGCTGATAGTGATGAGGAGATGCAGACATAGATGCGATTGACCGT
TGAACTGATCCAAAATTCCCTGTCCTACATTAACCCGCTCAAAGACCGCG
AGCTAGATCTTCGAGGGCACAAGATACCCGCTATTGAGAACTTGGGTATT
GCCAAGGACCAAGATGCAATCGACCTAACAGACAACGATATCACCTCCCT
CGGAAACTTTCCCTTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTA
ACCGAGTCAAGCAGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTG
AGCGCGCTGGTGTTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGA
CCCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATC
CTGTTACCAGGAAGGAGCACTATCGCTACTACGTCATCTGGCGCATCCCC
AGCGTCCGCTTCCTCGACTACCAGAAAGTGAAGGACGCGGAGCGCGAAAA
AGCCACCGAGTTGTTCGGCACAGCTGAGGAGCCGTCTGCGCTGGCGTCTA
AGATCATGGGAATCAAGTCTCGCACGTTTGATGTGCCCTCGGGCGCAGGG
GGTGCGGATCGTGGTGCGCCCGCGGATAAGGCGGTGCGGGTGAAGTTGAC
GGAGAAGGAGAGGAAGAGGGTGGAGAAGATGATTCGCGAGGCGAAGAGTT
TGCAGGAGATTTCGCGGTTGGAGAAGGAGTTGAATGAGGGGAGGATACCT
GGAGGTGCATTGGATTATGCTGATAGTGATGAGGAGATGCAGACATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LEA1M747DRAFT_291625Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291625-T1M747DRAFT_291625-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291625-T1.utr5p1M747DRAFT_291625-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291625-T1.exon1M747DRAFT_291625-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_291625-T1.exon2M747DRAFT_291625-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_291625-T1.exon3M747DRAFT_291625-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_291625-T1.exon4M747DRAFT_291625-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291625-T1.cdsM747DRAFT_291625-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_291625-T1.utr3p1M747DRAFT_291625-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR032675
DBxrefPFAM:PF14580
DBxrefPFAM:PF13855
ProductU2 snRNP complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1154199..1155375 +
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