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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851899.1:1651418..1654743- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_8926-T1 ID=M747DRAFT_8926-T1|Name=M747DRAFT_8926-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=3326bp|location=Sequence derived from alignment at KZ851899.1:1651418..1654743- (Aspergillus niger ATCC 13496)
GCGCACCAGCAAGAACCATCGCTATTGCGTTCGCGCCTCGCACCGTTCCG
GTCCTGTTACTCTTGCGTCCCGCCGCTATTTACAATCATCATGTCTCACT
GCCTGTGACCGAATTCCACCAACTATAAATCTCTCTCCATCCGATCCGCA
TTACCACCCATACCTGGCACTTTCGTCCACAAGTGCTTAACCTCCATTTA
CAACCGACGGAAAGATGGATAACCCACAGAAGACCCCCAGCCGACCGAGT
GGTATTCCTCGCTTGGCCTCCAGATTACCTCTACCGACGTCTGCCGCCAG
TAAACCCCTGCGTCCCTCCCCCTCACGCGAGAAGCTACAAACCGACCCGG
GTCTCCACGCCAGCCGGTTGAGCAGACCTTCTCAAGAGCCGGTGTTCAAA
AAGCCCTTACCGAAGTATACGGTGCCGAAGAAGTCCTTAGGTACCCAGCG
TCAAGAAAGAGAGATTTCTCAGACAAGGACAAGCGATACGGGGATAACAG
AACCCGAAGGGGCACTGAACAACAAATCCCTGTATCTGGAGGCCGACAAT
GTACCAGCCCATGATGCAGAGTTTCGAGGTCGCACACGACCATCGCTCTC
TGAGCGAACAATTGAGACTCTTTCCCAGATCCCCCCTTCGCCTAGACCTC
AGAGCAGACAGTCTAGTAGTTTCTTCGGCGCAACTAGTCCCATGCGCTCG
CCGTCTCGTCCGCCGTCTGCAATGACAAGCTATTCAAGGTCGCCGTCAAG
ATCATCTTCTCGTCAACCCAGTGGAAGCGACTATCTTTCCCGCCCGCCTT
CGTCCATGCGCCTTCCATCGAGGAGTGGTCCATCGTTTTCTGCGAACAGT
GCAACATCCGATCAAAGCTCCATTCCAAATACAGATAGTCCATCGAAATT
GAAACCGCCCTCTACTAGGATCACACCCTACGCCCGGAAAAATGACGTGA
CATTGTCATCCAATCCTCGTCATGCACCTACCAGGGTGTCTACGAGGCCC
ACAGAACCGACTGTAGATGCTCCGCAGCAACGCCTCGAAGTGAGGAAAAC
CCGGAAGGTCCAGCAGGGTCTCTCGGGCCAGAAGCCATCCTTGATGGGTT
CACGGTCGCCATCGGCAAAATCCACTTCATCAGATCTTACTCCGGAACAG
CAGACTGAGATGGAAACTCGAAAGGTCTCGAAATCGTCTAGCGCTTTGAG
GGAAAGTATCGCGAAGGCGAAGGCCGCGCGGAAGGCTGAGGCTCAGAAAA
CCACGGAGTCAACAACTGCTGCCGGTGGATTCAATTTCGATACGGACGAT
CCCTTCAACCAAGGTCCTAAGGATCCAAACCATGGACTTCTGCGGAAGCG
CATCGATGCAGGTCGAACTTCTGGTCACTTGAATATCGCGGCTATGTCTC
TTAAAGAACTGCCCAAAGAAGTCATGACGATGTACGATTTCGATTCCAAC
TCCACCACCGATTGGTATGAGAGTGTGGATCTTGTTAAACTTATCGCTGC
GGATAACGAGTTCACGGAGCTCCCCGATGACGCTTTCCCCGATATCGATG
CACACGAGCTAGACCCAGAGGTTGACGAAAGAGGAAATCAATTTGGCGGG
CTTGAGCTTCTAGATCTTCATGGCAATATCTTACAATCACTACCAGTAGG
CCTCAGAAGGCTGGAGCGGCTGCACACTCTGAATCTATCAAACAACAATC
TCAATATGGACGACATAAATGTTGTTATGGAACTAGAAACTCTCAGGGAT
CTGAGACTCGCCAAGAACAAGCTTCAAGGAGGCCTTACTCCAGATATCGG
ACGCCTCAGCAACCTGGAAGTACTGGACTTGCACGAGAACTCCTTGACAG
AGCTTCCGGGAGAGCTTGCAAAACTGGCCTCCCTCCGAGTCTTAAACGTG
GGCAATAACCAATTAAGCGCATTACCATTCGAGCAATTGTACATGCTCCC
GCTTAAGGAGCTCCACGCCCCGAGGAACAAGTTGAAGGGAACTCTTTTGC
CAGCGTCTGTGCAAAAGTTCGAGACACTACAGATCTTGGACGTAGCCAGC
AACGCCTTGGTGAGGCTCTCGGAGAACGAAGACCTCGAACTTCCCAATCT
GCAGAGTCTAGCAATCAATACGAACCGCATTCAATCTCTACCCGATGTTT
CATCGTGGCAAGCTCTCTTGACCCTGTTAGCGGAAGACAACAGTTTATCG
GATCTTCCTCACGGGTTCACTGGCCTGAAGAATATCAGGAATGTTGACTT
CACTGGTAACGATATTTCCAAGCTGGACGAGAAGATCGGCCTAATGGAGA
GTCTCGTCAACTTCCGCATAGCCAATAATCCCCTGCGGGAACGCAAGTTT
CTGAGCATGAACACGGAGGACCTGAAGCGCGATTTGCGTCACCGATGCGA
ACCGGAACCGCAAGATACAGACGATGAAGGCTCTGTTGCGACTCAGTTTA
CGTTGGCGCCAGAAACACCGGTCCAAACGGCCTCCTGGCAAATCAAGTCT
GGTGGTGTCCTCGACAAGTCATACACTGATCTGCGGGAGATAGAAGTACA
GGAGTTGGAACGCATCGATTTCCACGAAGTCCGATGCCTCCAATTACAAC
ACAACGAGCTAGAATGCTTTCCTGTTCCGGCTCTCAGCATGCTCGCATCT
AACCTAGCTGATCTGGATCTTTCAAATAACCCGCTCAATAGCGGATCTCT
CTTCTCAGGACCCGTTACCCTCCCCAGTCTTCAGAATCTCACCATTACCG
CTGCCGGCTTGACTACACTTGAGCCGCTACTAAGTTATCTTACTGCGCCA
GGCCTCATCTACCTTGATGTTTCATCCAACCGTCTCTCCGGATCCCTTCC
GGTTGTGCGCCGGAGCTACCCGAACCTGACAACATTATTGGCTTCTGATA
ACCGAATCAGCAATCTCGACTTTGAAGCGGTGCAAGGTCTACAGGTTCTA
GACGTAGGGAACAACGATATTGGCGTTCTGCCGCCGAAGCTCGGCCTTTT
GAGGACCGAAGGTTCTAGCAAGAATTGGGGCAACGGCTCACCCCTGCGAC
GCTTCGAAGTAGCAGGGAATAGTTTTCGGGTTCCCCGCTGGCAGGTGGTA
GCCAAGGGGACCGATGCGGTCCTCGAATGGCTCAAAGATCGTATCCCTGA
AGAAGAACTTCGTGAGTGGGAAACGGGCGACGAGTCAAATGACGAGTAAA
TTTGCCGTGTAATGTGGGGAAAGGTACGACTAAGATCGAGGCAACCTGCC
CGGGAGGACACTTGATTTCGGCTTCTTAACCTATGTATATTGTACCATCT
AAAGCGCACATACATGCAAAGCATTG back to topCoding sequence (CDS) from alignment at KZ851899.1:1651418..1654743- >M747DRAFT_8926-T1 ID=M747DRAFT_8926-T1|Name=M747DRAFT_8926-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2985bp|location=Sequence derived from alignment at KZ851899.1:1651418..1654743- (Aspergillus niger ATCC 13496)
ATGGATAACCCACAGAAGACCCCCAGCCGACCGAGTGGTATTCCTCGCTT
GGCCTCCAGATTACCTCTACCGACGTCTGCCGCCAGTAAACCCCTGCGTC
CCTCCCCCTCACGCGAGAAGCTACAAACCGACCCGGGTCTCCACGCCAGC
CGGTTGAGCAGACCTTCTCAAGAGCCGGTGTTCAAAAAGCCCTTACCGAA
GTATACGGTGCCGAAGAAGTCCTTAGGTACCCAGCGTCAAGAAAGAGAGA
TTTCTCAGACAAGGACAAGCGATACGGGGATAACAGAACCCGAAGGGGCA
CTGAACAACAAATCCCTGTATCTGGAGGCCGACAATGTACCAGCCCATGA
TGCAGAGTTTCGAGGTCGCACACGACCATCGCTCTCTGAGCGAACAATTG
AGACTCTTTCCCAGATCCCCCCTTCGCCTAGACCTCAGAGCAGACAGTCT
AGTAGTTTCTTCGGCGCAACTAGTCCCATGCGCTCGCCGTCTCGTCCGCC
GTCTGCAATGACAAGCTATTCAAGGTCGCCGTCAAGATCATCTTCTCGTC
AACCCAGTGGAAGCGACTATCTTTCCCGCCCGCCTTCGTCCATGCGCCTT
CCATCGAGGAGTGGTCCATCGTTTTCTGCGAACAGTGCAACATCCGATCA
AAGCTCCATTCCAAATACAGATAGTCCATCGAAATTGAAACCGCCCTCTA
CTAGGATCACACCCTACGCCCGGAAAAATGACGTGACATTGTCATCCAAT
CCTCGTCATGCACCTACCAGGGTGTCTACGAGGCCCACAGAACCGACTGT
AGATGCTCCGCAGCAACGCCTCGAAGTGAGGAAAACCCGGAAGGTCCAGC
AGGGTCTCTCGGGCCAGAAGCCATCCTTGATGGGTTCACGGTCGCCATCG
GCAAAATCCACTTCATCAGATCTTACTCCGGAACAGCAGACTGAGATGGA
AACTCGAAAGGTCTCGAAATCGTCTAGCGCTTTGAGGGAAAGTATCGCGA
AGGCGAAGGCCGCGCGGAAGGCTGAGGCTCAGAAAACCACGGAGTCAACA
ACTGCTGCCGGTGGATTCAATTTCGATACGGACGATCCCTTCAACCAAGG
TCCTAAGGATCCAAACCATGGACTTCTGCGGAAGCGCATCGATGCAGGTC
GAACTTCTGGTCACTTGAATATCGCGGCTATGTCTCTTAAAGAACTGCCC
AAAGAAGTCATGACGATGTACGATTTCGATTCCAACTCCACCACCGATTG
GTATGAGAGTGTGGATCTTGTTAAACTTATCGCTGCGGATAACGAGTTCA
CGGAGCTCCCCGATGACGCTTTCCCCGATATCGATGCACACGAGCTAGAC
CCAGAGGTTGACGAAAGAGGAAATCAATTTGGCGGGCTTGAGCTTCTAGA
TCTTCATGGCAATATCTTACAATCACTACCAGTAGGCCTCAGAAGGCTGG
AGCGGCTGCACACTCTGAATCTATCAAACAACAATCTCAATATGGACGAC
ATAAATGTTGTTATGGAACTAGAAACTCTCAGGGATCTGAGACTCGCCAA
GAACAAGCTTCAAGGAGGCCTTACTCCAGATATCGGACGCCTCAGCAACC
TGGAAGTACTGGACTTGCACGAGAACTCCTTGACAGAGCTTCCGGGAGAG
CTTGCAAAACTGGCCTCCCTCCGAGTCTTAAACGTGGGCAATAACCAATT
AAGCGCATTACCATTCGAGCAATTGTACATGCTCCCGCTTAAGGAGCTCC
ACGCCCCGAGGAACAAGTTGAAGGGAACTCTTTTGCCAGCGTCTGTGCAA
AAGTTCGAGACACTACAGATCTTGGACGTAGCCAGCAACGCCTTGGTGAG
GCTCTCGGAGAACGAAGACCTCGAACTTCCCAATCTGCAGAGTCTAGCAA
TCAATACGAACCGCATTCAATCTCTACCCGATGTTTCATCGTGGCAAGCT
CTCTTGACCCTGTTAGCGGAAGACAACAGTTTATCGGATCTTCCTCACGG
GTTCACTGGCCTGAAGAATATCAGGAATGTTGACTTCACTGGTAACGATA
TTTCCAAGCTGGACGAGAAGATCGGCCTAATGGAGAGTCTCGTCAACTTC
CGCATAGCCAATAATCCCCTGCGGGAACGCAAGTTTCTGAGCATGAACAC
GGAGGACCTGAAGCGCGATTTGCGTCACCGATGCGAACCGGAACCGCAAG
ATACAGACGATGAAGGCTCTGTTGCGACTCAGTTTACGTTGGCGCCAGAA
ACACCGGTCCAAACGGCCTCCTGGCAAATCAAGTCTGGTGGTGTCCTCGA
CAAGTCATACACTGATCTGCGGGAGATAGAAGTACAGGAGTTGGAACGCA
TCGATTTCCACGAAGTCCGATGCCTCCAATTACAACACAACGAGCTAGAA
TGCTTTCCTGTTCCGGCTCTCAGCATGCTCGCATCTAACCTAGCTGATCT
GGATCTTTCAAATAACCCGCTCAATAGCGGATCTCTCTTCTCAGGACCCG
TTACCCTCCCCAGTCTTCAGAATCTCACCATTACCGCTGCCGGCTTGACT
ACACTTGAGCCGCTACTAAGTTATCTTACTGCGCCAGGCCTCATCTACCT
TGATGTTTCATCCAACCGTCTCTCCGGATCCCTTCCGGTTGTGCGCCGGA
GCTACCCGAACCTGACAACATTATTGGCTTCTGATAACCGAATCAGCAAT
CTCGACTTTGAAGCGGTGCAAGGTCTACAGGTTCTAGACGTAGGGAACAA
CGATATTGGCGTTCTGCCGCCGAAGCTCGGCCTTTTGAGGACCGAAGGTT
CTAGCAAGAATTGGGGCAACGGCTCACCCCTGCGACGCTTCGAAGTAGCA
GGGAATAGTTTTCGGGTTCCCCGCTGGCAGGTGGTAGCCAAGGGGACCGA
TGCGGTCCTCGAATGGCTCAAAGATCGTATCCCTGAAGAAGAACTTCGTG
AGTGGGAAACGGGCGACGAGTCAAATGACGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR001611 |
| DBxref | InterPro:IPR032675 |
| DBxref | InterPro:IPR003591 |
| DBxref | PFAM:PF13855 |
| DBxref | PFAM:PF12799 |
| Product | leucine-rich repeat-containing protein 40 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851899.1 | supercontig | KZ851899.1:1651418..1654743 - |
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