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M747DRAFT_58302-T1, M747DRAFT_58302-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_58302-T1
Unique NameM747DRAFT_58302-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1491113..1492479-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_58302-T1 ID=M747DRAFT_58302-T1|Name=M747DRAFT_58302-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1367bp|location=Sequence derived from alignment at KZ851900.1:1491113..1492479- (Aspergillus niger ATCC 13496)
GCCGCTGCTGTCCCATCTTTTCTCGCCGCTACACTGTGAGCACGCCGAAT
CACAGTCTTTTCAACAGACTTTGGACGTGAGCCTCACCTTGCCACTCGAA
AGCCGTTGCACTCGCAGCTCCGAGTTTTTCGATCACTTGCGCGAAAATCG
CACCCTTGAATCAGAACACGATACATCCAAGTCTTGCCACGCTGCCTCTG
AATATGGCTGCTGTTTCCCCTGCTGCCGCTAGGGCCGAGCCAGGCCAATG
GAAGAAGAACCTCTCAGCCCACGTCATTTGCCCCGAGTGCAAAGAGGTTC
CCCCGAATCTGGAGTTCCCTGGCTCTCACGAAACTGTTTGCGGCTCATGT
GGTCTGGTTCTCGCTGATCGGGAGATTGACATGCACTCAGAATGGCGTAC
ATTCTCCAATGACGATCAGAACAACGACGACCCTTCTCGTGTTGGAGATG
CCATGAACCCGCTTCTCAACGGTGATCAACTAGAGACCCAGATTGCTAGT
GGTGGGTCGGGCCGCGTTCGCGACCTTTACCGTGCTCAGAACAAACAATC
GAGTGAAAAGGCAAACAAGGCTCTTCTGGCAGCCTACAAGGAAATTGGTG
CTCTTTGCGATGGTTTTAACATTCAGAAGAACGTGGCAGACACAGCGAAG
TATCTCTTCAAGATTGTGGACGATGCCAAGGCATTCAAGGGAAAGTCCCA
GGATGTGATCATTGCAGGCTGTATATTTATCGCCTGTCGCCAGTGCAAGG
TGCCACGTACCTTCACTGAGATCTTCGCGGTGACCAAGGTCACAAGGAAG
GAAATTGGGCGTATCTACAAAGCTCTGGAGAAGTTTTTCACTGCACAGAA
CCTCGAGCGGATCAATGCCGTGGTCTCCAGCGGAGGTGTCCCTGATCCCA
ACGACACATACACCGCCACTACTTCCACCAAGCCTAGTGACCTTTGCAAC
CGTTTCTGTAACCTTCTGGATCTGCCCTTCCAGGTTACCAGCGTCTCCTC
TGCTTTATCCGATCGCGTGACAACGATGGGAGATTTGGCCGGACGTTCTC
CCCTGTCCATCGTGGCAGCCTGCATCTACATGGCATCGTACCTGATGGGA
CACGGCAAGAGCGCCAAGGAGATATCCCAGGTGGCCCATGTCAGCGATGG
TACGATCCGCGGTGCTTACAAGCAGCTATATGCTGAAAGAGAGCGCCTCA
TCGATCCCGAGTGGATCAAAGATGGGAAGGGTGACCTGAAGAACCTACCT
AACAGTTAAATGGGCTGGACCTGGCCCCATCTCAAAAGCAGTTTGACTAC
CTGACATTTGCCGGAATAGCTGCTCTTGCTTCACACCCAACTCACTAGTC
AAACATCGCTACTAAGC
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Coding sequence (CDS) from alignment at KZ851900.1:1491113..1492479-

>M747DRAFT_58302-T1 ID=M747DRAFT_58302-T1|Name=M747DRAFT_58302-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1056bp|location=Sequence derived from alignment at KZ851900.1:1491113..1492479- (Aspergillus niger ATCC 13496)
ATGGCTGCTGTTTCCCCTGCTGCCGCTAGGGCCGAGCCAGGCCAATGGAA
GAAGAACCTCTCAGCCCACGTCATTTGCCCCGAGTGCAAAGAGGTTCCCC
CGAATCTGGAGTTCCCTGGCTCTCACGAAACTGTTTGCGGCTCATGTGGT
CTGGTTCTCGCTGATCGGGAGATTGACATGCACTCAGAATGGCGTACATT
CTCCAATGACGATCAGAACAACGACGACCCTTCTCGTGTTGGAGATGCCA
TGAACCCGCTTCTCAACGGTGATCAACTAGAGACCCAGATTGCTAGTGGT
GGGTCGGGCCGCGTTCGCGACCTTTACCGTGCTCAGAACAAACAATCGAG
TGAAAAGGCAAACAAGGCTCTTCTGGCAGCCTACAAGGAAATTGGTGCTC
TTTGCGATGGTTTTAACATTCAGAAGAACGTGGCAGACACAGCGAAGTAT
CTCTTCAAGATTGTGGACGATGCCAAGGCATTCAAGGGAAAGTCCCAGGA
TGTGATCATTGCAGGCTGTATATTTATCGCCTGTCGCCAGTGCAAGGTGC
CACGTACCTTCACTGAGATCTTCGCGGTGACCAAGGTCACAAGGAAGGAA
ATTGGGCGTATCTACAAAGCTCTGGAGAAGTTTTTCACTGCACAGAACCT
CGAGCGGATCAATGCCGTGGTCTCCAGCGGAGGTGTCCCTGATCCCAACG
ACACATACACCGCCACTACTTCCACCAAGCCTAGTGACCTTTGCAACCGT
TTCTGTAACCTTCTGGATCTGCCCTTCCAGGTTACCAGCGTCTCCTCTGC
TTTATCCGATCGCGTGACAACGATGGGAGATTTGGCCGGACGTTCTCCCC
TGTCCATCGTGGCAGCCTGCATCTACATGGCATCGTACCTGATGGGACAC
GGCAAGAGCGCCAAGGAGATATCCCAGGTGGCCCATGTCAGCGATGGTAC
GATCCGCGGTGCTTACAAGCAGCTATATGCTGAAAGAGAGCGCCTCATCG
ATCCCGAGTGGATCAAAGATGGGAAGGGTGACCTGAAGAACCTACCTAAC
AGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0070897transcription preinitiation complex assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_58302M747DRAFT_58302Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_58302-T1.cdsM747DRAFT_58302-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_58302-T1.utr3p1M747DRAFT_58302-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_58302-T1.exon1M747DRAFT_58302-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_58302-T1.utr5p1M747DRAFT_58302-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_58302-T1M747DRAFT_58302-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262PAY
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR023486
DBxrefInterPro:IPR013150
DBxrefInterPro:IPR013137
DBxrefInterPro:IPR013763
DBxrefInterPro:IPR000812
DBxrefPFAM:PF08271
DBxrefPFAM:PF00382
Producttranscription initiation protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1491113..1492479 -
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