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M747DRAFT_301557-T1, M747DRAFT_301557-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_301557-T1
Unique NameM747DRAFT_301557-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:310432..311224+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_301557-T1 ID=M747DRAFT_301557-T1|Name=M747DRAFT_301557-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=793bp|location=Sequence derived from alignment at KZ851901.1:310432..311224+ (Aspergillus niger ATCC 13496)
ATGAAGTGTTAGTGAAATGCTGCATCACCTCGACTCTTGATTTTTCTCGT
CTTCGAATCCAAACTGACAGGATGTTACGATAGTCATGAAAGTGGGCCGT
GTGGCCATCATCACCCGTGGCCGTTACGCCGGTAAGAAGGTACGACAACC
GATTTCTTCATTTTCTGGCGAGGAGATACATATATATATACCCCGAGGTG
GAATGGATTGGAAGGAATGATTTTTTGCCGACTCGAAGGAAATGAATTTT
CGATTTGCATGGGAATAAAACAATCGAGCGGAAACGCGAATGATGGGCGA
ACTACCATGGGGGCAAAAGCGAACGGAATGTGCAAGGATATATGTGCTGA
CGAGGGTTTCTTTTCGCGAATGACAGGTCGTCATTGTCCAGCCTAACGAC
ACTGGCTCCAAGGCGCACCCCTTCCCTTACGCCATCGTCGCCGGTATCGA
GCGCTACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAAGACCGTCGAGA
AGCGCAGCCGCATCAAGCCCTTCATCAAGGTCGTCAACTACAACCACTTG
ATGCCCACTCGCTACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCGTCTC
CACCGAGACCTTCAAGGAGGTTTCCACCCGCGAGGACGCCAAGAAGAACG
TCAAGAAGGCCCTTGAGGACCGCTACACCAGCGGCAAGAACCGTTGGTTC
TTCACTCCTCTGCGTACGTTTTGCCATCCATTGCTTTTTGCCTACGTTGG
CTGGATTAAGGTTCGCAATGCTGACGGTTCTACAGGTTTCTAA
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Coding sequence (CDS) from alignment at KZ851901.1:310432..311224+

>M747DRAFT_301557-T1 ID=M747DRAFT_301557-T1|Name=M747DRAFT_301557-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1632bp|location=Sequence derived from alignment at KZ851901.1:310432..311224+ (Aspergillus niger ATCC 13496)
ATGAAGTTCATGAAAGTGGGCCGTGTGGCCATCATCACCCGTGGCCGTTA
CGCCGGTAAGAAGGTCGTCATTGTCCAGCCTAACGACACTGGCTCCAAGG
CGCACCCCTTCCCTTACGCCATCGTCGCCGGTATCGAGCGCTACCCCCTC
AAGGTCACCCGCCGCATGGGTAAGAAGACCGTCGAGAAGCGCAGCCGCAT
CAAGCCCTTCATCAAGGTCGTCAACTACAACCACTTGATGCCCACTCGCT
ACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCGTCTCCACCGAGACCTTC
AAGGAGGTTTCCACCCGCGAGGACGCCAAGAAGAACGTCAAGAAGGCCCT
TGAGGACCGCTACACCAGCGGCAAGAACCGTTGGTTCTTCACTCCTCTGC
GTTTCTAAATGAAGTTCATGAAAGTGGGCCGTGTGGCCATCATCACCCGT
GGCCGTTACGCCGGTAAGAAGGTCGTCATTGTCCAGCCTAACGACACTGG
CTCCAAGGCGCACCCCTTCCCTTACGCCATCGTCGCCGGTATCGAGCGCT
ACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAAGACCGTCGAGAAGCGC
AGCCGCATCAAGCCCTTCATCAAGGTCGTCAACTACAACCACTTGATGCC
CACTCGCTACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCGTCTCCACCG
AGACCTTCAAGGAGGTTTCCACCCGCGAGGACGCCAAGAAGAACGTCAAG
AAGGCCCTTGAGGACCGCTACACCAGCGGCAAGAACCGTTGGTTCTTCAC
TCCTCTGCGTTTCTAAATGAAGTTCATGAAAGTGGGCCGTGTGGCCATCA
TCACCCGTGGCCGTTACGCCGGTAAGAAGGTCGTCATTGTCCAGCCTAAC
GACACTGGCTCCAAGGCGCACCCCTTCCCTTACGCCATCGTCGCCGGTAT
CGAGCGCTACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAAGACCGTCG
AGAAGCGCAGCCGCATCAAGCCCTTCATCAAGGTCGTCAACTACAACCAC
TTGATGCCCACTCGCTACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCGT
CTCCACCGAGACCTTCAAGGAGGTTTCCACCCGCGAGGACGCCAAGAAGA
ACGTCAAGAAGGCCCTTGAGGACCGCTACACCAGCGGCAAGAACCGTTGG
TTCTTCACTCCTCTGCGTTTCTAAATGAAGTTCATGAAAGTGGGCCGTGT
GGCCATCATCACCCGTGGCCGTTACGCCGGTAAGAAGGTCGTCATTGTCC
AGCCTAACGACACTGGCTCCAAGGCGCACCCCTTCCCTTACGCCATCGTC
GCCGGTATCGAGCGCTACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAA
GACCGTCGAGAAGCGCAGCCGCATCAAGCCCTTCATCAAGGTCGTCAACT
ACAACCACTTGATGCCCACTCGCTACACCCTTGAGCTCGAGGGTCTTAAG
GGTGCCGTCTCCACCGAGACCTTCAAGGAGGTTTCCACCCGCGAGGACGC
CAAGAAGAACGTCAAGAAGGCCCTTGAGGACCGCTACACCAGCGGCAAGA
ACCGTTGGTTCTTCACTCCTCTGCGTTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL27AM747DRAFT_301557Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_301557-T1.exon1M747DRAFT_301557-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_301557-T1.exon2M747DRAFT_301557-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_301557-T1.exon3M747DRAFT_301557-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_301557-T1.exon4M747DRAFT_301557-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_301557-T1.cdsM747DRAFT_301557-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_301557-T1M747DRAFT_301557-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041991
DBxrefInterPro:IPR018262
DBxrefInterPro:IPR001141
DBxrefInterPro:IPR038655
DBxrefPFAM:PF01777
Product60S ribosomal protein L27A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:310432..311224 +
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