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M747DRAFT_292687-T1, M747DRAFT_292687-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_292687-T1
Unique NameM747DRAFT_292687-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:363803..364790-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_292687-T1 ID=M747DRAFT_292687-T1|Name=M747DRAFT_292687-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=988bp|location=Sequence derived from alignment at KZ851902.1:363803..364790- (Aspergillus niger ATCC 13496)
GCCCAACTCCAAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGG
TCACCCGTGTCCTCGGCCGTACCGGTACGTCGTGAATATCTCAATTTTCC
GAATTTCGATGCCTTTCGCCTGGATATATACAATTGCGGTGTTTCCGCAA
CGGCGTGGAGATGGTACCTTTTGCTTGAGAGCAGATTCTAACAGGCATTT
TACTTTATAGGATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCAT
GGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGGTATGC
GATTTCTCCGTTGAATACAGTTGATGATCTATATTTTCTACGGCTATGGT
GGTGGCGCTGGTTGGACCGAATCGAATTATTTCCCCTCGAAGAGAAAATC
CCGCGAGAAGAATGGCAAAGAATGAGAATGTGCGCACGCATCGGAAATCG
ACAACATCCACGATTCTATAAGCGAAAAGGACGAATCTCCCAAACCCAAC
ACGACGCACGCAGGAATCGAAGAGAAGGAATAAGGAAACCAAGCAGTATC
GCGGGTTATTTTTCATCTCCACGGGGAAATATCGCATTCAGTCCAGCCAG
CCAGCCAACCAACCAGTCGCTCCGTCATGTCCAAACCAAACCCATATATC
GCACACATCAAGCTAACTAAACTCCTCTTCGTCGCAAACAGTCAAGGTCG
ACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCCGCCGTCTCCGT
TAATTTCCTTTACCAACTCCGAGTTTTCGTCAACATCTTTTTCCCTCTCG
AGGCTATGTACCCTTGCTTGCGTTGGAAATGATTCTGGGAGGTCGGGAAG
GCAAAAAAGAACTATCTTATCTTATGGGCTGATGCGGCATCCGGGTTGTT
GTGACTTCGTTGTCCTTTTGTTGTTTTTCTTATCATTCCTGTCTGTGTGT
CCAGAATCATCCTTGCACTACTGGACTTCATATAGAGA
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Coding sequence (CDS) from alignment at KZ851902.1:363803..364790-

>M747DRAFT_292687-T1 ID=M747DRAFT_292687-T1|Name=M747DRAFT_292687-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=621bp|location=Sequence derived from alignment at KZ851902.1:363803..364790- (Aspergillus niger ATCC 13496)
TCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCCGC
CGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTC
ATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGATGG
ATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCTCGGC
CGTACCGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGA
GGCCCGCCGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGGTCCGCGT
CGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCC
CAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGT
CCTCGGCCGTACCGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCG
AACGCGAGGCCCGCCGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGG
TCCGCGTCGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTC
AAGGGCCCAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCA
CCCGTGTCCTCGGCCGTACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS28M747DRAFT_292687Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292687-T1M747DRAFT_292687-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292687-T1.cdsM747DRAFT_292687-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292687-T1.utr3p1M747DRAFT_292687-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292687-T1.exon3M747DRAFT_292687-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_292687-T1.exon2M747DRAFT_292687-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_292687-T1.exon1M747DRAFT_292687-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_292687-T1.utr5p1M747DRAFT_292687-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR028626
DBxrefInterPro:IPR000289
DBxrefPFAM:PF01200
Product40S ribosomal protein S28
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:363803..364790 -
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