You are here

Home

M747DRAFT_293025-T1, M747DRAFT_293025-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_293025-T1
Unique NameM747DRAFT_293025-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:548500..549741+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_293025-T1 ID=M747DRAFT_293025-T1|Name=M747DRAFT_293025-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1242bp|location=Sequence derived from alignment at KZ851903.1:548500..549741+ (Aspergillus niger ATCC 13496)
CAACAACCCACTCGCTGCTTCTTACCAGCAACCTCGAACATACCCTCTAT
CACCCGCCCAAGATGACACCTGCTCCATTAACCAAAACACTCGAATTCGA
GAAAAAGAACCAGAACATGCCAAAACTCCCCAAACGTTAGCTTTCCTTCC
TCCGCCTCTTTTCACGCGACAACCCCCACTAACCCTGCTACGCAATGTAG
ATGTGAAAGTCCAAAAGCGCCCGATCCCACATCCATCCACTCCCTCCCCA
TACTCAGGCTCCTCGTCACCCAAAACCATCTACGTTTCATCCAGCTCCCC
CACAATGGGCGTTGTCAAGCGCGTCCAGAAGTACCTTCGGGCGGCGGAGA
ACCGCGCCACGGCAAAATTGCTCAGCGGAAATAACAAGGGAAAGAAGGGC
GACCGAAGGAATCAGTTCGCGCAGTTGGCGCGAAGTAACGAGGCGTTGAA
GAAGGAGGAGGTGTTTGTGAAGGCCACGGGGCGGGCGATGGAGAGGGCAT
TGAAGGTGGGGAAGTGGTTTGAGGCGAGGGGAGAGGAGTATACTGTGAGC
GTGAAGACGGGGAGTGTCCTTGTGGTTGACGATGTGGTGGAGGATGAAGA
AGAGAGGGAGAAGGCGGTAGAGGAGAGCGAGAGGATGAAAAAGGAGGTTG
AGGAAGCAAAGCTGAAGGGTGAGTATGGGGAGTTAACCAAGTCGGCGATG
CGGAAGAGAAAGAGGGCTGTTGCGCGGTTGGAGGGCGAACAGGAGCTGCC
GGAGACGAGGACGAGGTGGGTGAATATGGTGGAGGTGGCAGTTTCATTGA
AGTGAGGCATTCCATGGAATGGTATTATATTGCAATGAAAAAAGGAGGAC
AATGGAGCCAACCGGCACGCTACTGAGACCAGCCAGGCAGGTAAGGCCCT
TCATTTGCGGGCGCCATGGCCAAGCATTTCTGCAGATGCAGACGCAACTC
AGCAAGCAGGCCCAACTTGACTTTAACCGCTTTTTGGCCCTCGAAGTACA
GCAATGGATCCAGACTTGGTATCGATTGTGCCCTTGCCCGGTGTCTTGAC
GGCGGCATCAAAAGCCGCCTTGGAAGATTCTTCCGGCTATGCAGCGTCTA
CCCAGCGTCCATGTGCAGCGGACGCCCAGCAGCAACGTACAAGCGTTGGC
GGGCGATCTATCTCACAGAATTTCAGGTATTATTTTTTTTGGACAAGGGC
ACGGCAAACCCTCTAGGGAACTAGTGTTACAGAAAATCAAAC
back to top

Coding sequence (CDS) from alignment at KZ851903.1:548500..549741+

>M747DRAFT_293025-T1 ID=M747DRAFT_293025-T1|Name=M747DRAFT_293025-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1356bp|location=Sequence derived from alignment at KZ851903.1:548500..549741+ (Aspergillus niger ATCC 13496)
ATGACACCTGCTCCATTAACCAAAACACTCGAATTCGAGAAAAAGAACCA
GAACATGCCAAAACTCCCCAAACATGTGAAAGTCCAAAAGCGCCCGATCC
CACATCCATCCACTCCCTCCCCATACTCAGGCTCCTCGTCACCCAAAACC
ATCTACGTTTCATCCAGCTCCCCCACAATGGGCGTTGTCAAGCGCGTCCA
GAAGTACCTTCGGGCGGCGGAGAACCGCGCCACGGCAAAATTGCTCAGCG
GAAATAACAAGGGAAAGAAGGGCGACCGAAGGAATCAGTTCGCGCAGTTG
GCGCGAAGTAACGAGGCGTTGAAGAAGGAGGAGGTGTTTGTGAAGGCCAC
GGGGCGGGCGATGGAGAGGGCATTGAAGGTGGGGAAGTGGTTTGAGGCGA
GGGGAGAGGAGTATACTGTGAGCGTGAAGACGGGGAGTGTCCTTGTGGTT
GACGATGTGGTGGAGGATGAAGAAGAGAGGGAGAAGGCGGTAGAGGAGAG
CGAGAGGATGAAAAAGGAGGTTGAGGAAGCAAAGCTGAAGGGTGAGTATG
GGGAGTTAACCAAGTCGGCGATGCGGAAGAGAAAGAGGGCTGTTGCGCGG
TTGGAGGGCGAACAGGAGCTGCCGGAGACGAGGACGAGGTGGGTGAATAT
GGTGGAGGTGGCAGTTTCATTGAAGTGAATGACACCTGCTCCATTAACCA
AAACACTCGAATTCGAGAAAAAGAACCAGAACATGCCAAAACTCCCCAAA
CATGTGAAAGTCCAAAAGCGCCCGATCCCACATCCATCCACTCCCTCCCC
ATACTCAGGCTCCTCGTCACCCAAAACCATCTACGTTTCATCCAGCTCCC
CCACAATGGGCGTTGTCAAGCGCGTCCAGAAGTACCTTCGGGCGGCGGAG
AACCGCGCCACGGCAAAATTGCTCAGCGGAAATAACAAGGGAAAGAAGGG
CGACCGAAGGAATCAGTTCGCGCAGTTGGCGCGAAGTAACGAGGCGTTGA
AGAAGGAGGAGGTGTTTGTGAAGGCCACGGGGCGGGCGATGGAGAGGGCA
TTGAAGGTGGGGAAGTGGTTTGAGGCGAGGGGAGAGGAGTATACTGTGAG
CGTGAAGACGGGGAGTGTCCTTGTGGTTGACGATGTGGTGGAGGATGAAG
AAGAGAGGGAGAAGGCGGTAGAGGAGAGCGAGAGGATGAAAAAGGAGGTT
GAGGAAGCAAAGCTGAAGGGTGAGTATGGGGAGTTAACCAAGTCGGCGAT
GCGGAAGAGAAAGAGGGCTGTTGCGCGGTTGGAGGGCGAACAGGAGCTGC
CGGAGACGAGGACGAGGTGGGTGAATATGGTGGAGGTGGCAGTTTCATTG
AAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004526ribonuclease P activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_293025M747DRAFT_293025Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293025-T1.utr5p1M747DRAFT_293025-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293025-T1.exon1M747DRAFT_293025-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_293025-T1.exon2M747DRAFT_293025-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293025-T1.cdsM747DRAFT_293025-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293025-T1.utr3p1M747DRAFT_293025-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_293025-T1M747DRAFT_293025-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036882
DBxrefInterPro:IPR014612
DBxrefPFAM:PF12328
DBxrefPFAM:PF01918
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:548500..549741 +
Powered by Drupal