You are here

Home

M747DRAFT_329879-T1, M747DRAFT_329879-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_329879-T1
Unique NameM747DRAFT_329879-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:473728..474861-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_329879-T1 ID=M747DRAFT_329879-T1|Name=M747DRAFT_329879-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1134bp|location=Sequence derived from alignment at KZ851907.1:473728..474861- (Aspergillus niger ATCC 13496)
TGCGGGGATCATCTATCGAAGCTTTCTGCAATGACGACGATCGTATGCAA
ACGCCTGGTGCAGCAGCGGGTTGCCCGCGCGAATTGGGTGGTGGGCGATG
GTTGCCGTACCCTCACCACCAGCGCTCCGTGGCTTGCAGGACACAATCGA
TGGTCTCAGATCAAACATGACAAGGCCAAAAATGACAAGGCAAAAAGCAA
GGAGCGCCAACTTATTGGCAAGGAAATCAGCAGTGCAACTCAGAGTATGT
ACTTGGAAGGCTTTCGACAATCAATCCCCCGTCATTCTTCGGTATTGATC
TCAAGCAGTGTGGGGTCCCGATCCTAAATTCAATCCGCGCCTTACCCTCG
CCCTTTCCAATGCAAAGCGAGCAGGAATTCCAAAGACTGTGATCGAAGCA
GCAGTTGCTCGGGGACAGGGCATAAGTGTCACTGGTGAAGCTTTGGAACA
GGTCACGGTCGAAGCTATTCTCCCTCATTCGGTTGCGGCCGTTCTCGAGT
GTCTGACCGATCAGAAAGCCCGTGTATTGCAAGACGTTCGACACGCTATC
AAAGATGCCGGGGGCATCGTCACACCTACCACATACCTCTTTGAAAAGAA
AGGCAGGATCATCTTCGAGAAGAAGGATGGGGTGGATCCCGACGACTATA
TAGACCAGGCTATCGAAGCAGGTGCGACGGATATCACGGCAGATGAGCAA
GGCCGGCTCCTTGTCTTCACAGAGCCTACGGAAACAAAGAGTGTGGGCGA
GACACTTGAGAAAATGATTGGCCTTTCCATTGAGGAGTTGGATATCATAT
GGGATCCCAACCAAGACACAATAGTCGATCTCAAGGATGAGGCACAGGTT
GCGGAAATGGAGGATATCATCAGTGACCTTCGAGAAGAGCCGAGTCTACG
AGATATCTACCTGAACACAGTCCAGCGCTTCTGATGATTTTTCATTGATT
TTTGGCAGCTTGATGCCTTCCACGACTACAGCCTGGGGCCTCTCATACTT
CCTCATTACAGTGTACACTAGACTCGGAACACCTTGGAGTGGCTGGCGGC
TCGTCGAGCCCTTTCTGTATTATATTACTACAAATCACGAAATATCAAAG
CGTGTACGCATTTCGAATACATACGAGAGGAAGG
back to top

Coding sequence (CDS) from alignment at KZ851907.1:473728..474861-

>M747DRAFT_329879-T1 ID=M747DRAFT_329879-T1|Name=M747DRAFT_329879-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1680bp|location=Sequence derived from alignment at KZ851907.1:473728..474861- (Aspergillus niger ATCC 13496)
TGTGGGGTCCCGATCCTAAATTCAATCCGCGCCTTACCCTCGCCCTTTCC
AATGCAAAGCGAGCAGGAATTCCAAAGACTGTGATCGAAGCAGCAGTTGC
TCGGGGACAGGGCATAAGTGTCACTGGTGAAGCTTTGGAACAGGTCACGG
TCGAAGCTATTCTCCCTCATTCGGTTGCGGCCGTTCTCGAGTGTCTGACC
GATCAGAAAGCCCGTGTATTGCAAGACGTTCGACACGCTATCAAAGATGC
CGGGGGCATCGTCACACCTACCACATACCTCTTTGAAAAGAAAGGCAGGA
TCATCTTCGAGAAGAAGGATGGGGTGGATCCCGACGACTATATAGACCAG
GCTATCGAAGCAGGTGCGACGGATATCACGGCAGATGAGCAAGGCCGGCT
CCTTGTCTTCACAGAGCCTACGGAAACAAAGAGTGTGGGCGAGACACTTG
AGAAAATGATTGGCCTTTCCATTGAGGAGTTGGATATCATATGGGATCCC
AACCAAGACACAATAGTCGATCTCAAGGATGAGGCACAGGTTGCGGAAAT
GGAGGATATCATCAGTGACCTTCGAGAAGAGCCGAGTCTACGAGATATCT
ACCTGAACACAGTCCAGCGCTTCTGAATGACGACGATCGTATGCAAACGC
CTGGTGCAGCAGCGGGTTGCCCGCGCGAATTGGGTGGTGGGCGATGGTTG
CCGTACCCTCACCACCAGCGCTCCGTGGCTTGCAGGACACAATCGATGGT
CTCAGATCAAACATGACAAGGCCAAAAATGACAAGGCAAAAAGCAAGGAG
CGCCAACTTATTGGCAAGGAAATCAGCAGTGCAACTCAGATGTGGGGTCC
CGATCCTAAATTCAATCCGCGCCTTACCCTCGCCCTTTCCAATGCAAAGC
GAGCAGGAATTCCAAAGACTGTGATCGAAGCAGCAGTTGCTCGGGGACAG
GGCATAAGTGTCACTGGTGAAGCTTTGGAACAGGTCACGGTCGAAGCTAT
TCTCCCTCATTCGGTTGCGGCCGTTCTCGAGTGTCTGACCGATCAGAAAG
CCCGTGTATTGCAAGACGTTCGACACGCTATCAAAGATGCCGGGGGCATC
GTCACACCTACCACATACCTCTTTGAAAAGAAAGGCAGGATCATCTTCGA
GAAGAAGGATGGGGTGGATCCCGACGACTATATAGACCAGGCTATCGAAG
CAGGTGCGACGGATATCACGGCAGATGAGCAAGGCCGGCTCCTTGTCTTC
ACAGAGCCTACGGAAACAAAGAGTGTGGGCGAGACACTTGAGAAAATGAT
TGGCCTTTCCATTGAGGAGTTGGATATCATATGGGATCCCAACCAAGACA
CAATAGTCGATCTCAAGGATGAGGCACAGGTTGCGGAAATGGAGGATATC
ATCAGTGACCTTCGAGAAGAGCCGAGTCTACGAGATATCTACCTGAACAC
AGTCCAGCGCTTCTGAATGACGACGATCGTATGCAAACGCCTGGTGCAGC
AGCGGGTTGCCCGCGCGAATTGGGTGGTGGGCGATGGTTGCCGTACCCTC
ACCACCAGCGCTCCGTGGCTTGCAGGACACAATCGATGGTCTCAGATCAA
ACATGACAAGGCCAAAAATGACAAGGCAAAAAGCAAGGAGCGCCAACTTA
TTGGCAAGGAAATCAGCAGTGCAACTCAGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_329879M747DRAFT_329879Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329879-T1M747DRAFT_329879-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329879-T1.cdsM747DRAFT_329879-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329879-T1.utr3p1M747DRAFT_329879-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329879-T1.exon2M747DRAFT_329879-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_329879-T1.exon1M747DRAFT_329879-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_329879-T1.utr5p1M747DRAFT_329879-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029072
DBxrefInterPro:IPR002876
DBxrefInterPro:IPR017856
DBxrefInterPro:IPR026564
DBxrefPFAM:PF01709
ProductYebC-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:473728..474861 -
Powered by Drupal