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M747DRAFT_182740-T1, M747DRAFT_182740-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_182740-T1
Unique NameM747DRAFT_182740-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:833880..835123-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_182740-T1 ID=M747DRAFT_182740-T1|Name=M747DRAFT_182740-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1244bp|location=Sequence derived from alignment at KZ851907.1:833880..835123- (Aspergillus niger ATCC 13496)
TAATCTCCGCAGAACGCCAGCGTACAAGGGTGATCTGCTATTACAAATTC
ACCGAGTTCACTTTCTTCGAGTAATCCAGGCTACCCTACGATAATAAGGC
TCCTCCACAACCGTGGTCACTTTAACACCTTTTACAATGTCGTTGGATAC
ACCAGCTTCATCCCTCAGTGCTTCAGATCCTCACGCGCGGCTCCTGGGTG
CCTCTTGTCTTGATTTCCTCCTGATAGAGCTCGTCCCCATGGCGGAGCGC
TTAGCGAAAGAACTTGCGTCAGAAGAGAAGCTACCAGATGATGAAGAAAT
CCGGGAAACTACATTCTTTCGCCTCGAATCTCTAGGTTACAGGGTTGGAC
AAGGGTTGGCTGAACGGTACGCTTGAAAGTCCGCTATTCGCCTTTGCGAC
GTCCTTTCGGCCCTCCAAGTTATGAATCCATTTGACAGGTGGATATGCAT
AAGAACAACATGATCACCGACAGATCGCAGGTGCTATTGATGGAAGTCCC
GCAGCTAATGCATATCTGTTGTCGACCGGAGCAGATTCTCGCGCGATCGC
CCACGATTTGCAGATAACCTAGACATCATAAAGTTCCTGTGCAAGGACTT
ATGGACGATACTCTTTAAAAAGCAGGTGGATAACCTGAAAACGAATCACC
GGGTAGGCAGAACGAAATGCGGCCCCAAATCTCTATGAAGTGCCCTGGTT
CGCATTTTGGGGGAAGAGGCTAATACCTGCACTACCAGGGCGTGTATGTC
TTGACTGATAACTCTTTTCGACCATTTGCAAGGATGAGTACGTCTGTTCG
AAGTGAGGCGGTATCTATGGCCCAAGCGGTGTGTTTGTCCCGGGATACAC
GTATCCCCCAACATGTCAACTTTACATGATCTAACGACTTGCGGTAAATT
ATAGTATCTATGGTTTCCATGCGGTGTTATTCGCGGTGCTCTATCAAACC
TTGGTATTACAACCACAGTTCAAGCGGAATCTACAGAGCTTCCAGGCGCA
ACCTTCCAAATCAAAACCGTCAACCCCAAGCCCTGATGTCGCTCAGACAT
AGACGGCTTCGAACCTTATCCAGGGCAATCAATCGTACAGTATACGTTCA
TCACTGGGAAGCTTGGATGTCAATCCCATGCAGCACTCTGGGGATATATG
CTGCAGCTACAGGTCTCACGAAAGGATTGCTGGATGATCCTACAAACATT
TGAGTGCGGGCATGAAGAATACATGGTTTTATCATTTAAACAGG
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Coding sequence (CDS) from alignment at KZ851907.1:833880..835123-

>M747DRAFT_182740-T1 ID=M747DRAFT_182740-T1|Name=M747DRAFT_182740-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2280bp|location=Sequence derived from alignment at KZ851907.1:833880..835123- (Aspergillus niger ATCC 13496)
TATCTATGGTTTCCATGCGGTGTTATTCGCGGTGCTCTATCAAACCTTGG
TATTACAACCACAGTTCAAGCGGAATCTACAGAGCTTCCAGGCGCAACCT
TCCAAATCAAAACCGTCAACCCCAAGCCCTGAGGCGTGTATGTCTTGACT
GATAACTCTTTTCGACCATTTGCAAGGATGAGTACGTCTGTTCGAAGTGA
GGCGGTATCTATGGCCCAAGCGATTCTCGCGCGATCGCCCACGATTTGCA
GATAACCTAGACATCATAAAGTTCCTGTGCAAGGACTTATGGACGATACT
CTTTAAAAAGCAGGTGGATAACCTGAAAACGAATCACCGGATGTCGTTGG
ATACACCAGCTTCATCCCTCAGTGCTTCAGATCCTCACGCGCGGCTCCTG
GGTGCCTCTTGTCTTGATTTCCTCCTGATAGAGCTCGTCCCCATGGCGGA
GCGCTTAGCGAAAGAACTTGCGTCAGAAGAGAAGCTACCAGATGATGAAG
AAATCCGGGAAACTACATTCTTTCGCCTCGAATCTCTAGGTTACAGGGTT
GGACAAGGGTTGGCTGAACGTATCTATGGTTTCCATGCGGTGTTATTCGC
GGTGCTCTATCAAACCTTGGTATTACAACCACAGTTCAAGCGGAATCTAC
AGAGCTTCCAGGCGCAACCTTCCAAATCAAAACCGTCAACCCCAAGCCCT
GAGGCGTGTATGTCTTGACTGATAACTCTTTTCGACCATTTGCAAGGATG
AGTACGTCTGTTCGAAGTGAGGCGGTATCTATGGCCCAAGCGATTCTCGC
GCGATCGCCCACGATTTGCAGATAACCTAGACATCATAAAGTTCCTGTGC
AAGGACTTATGGACGATACTCTTTAAAAAGCAGGTGGATAACCTGAAAAC
GAATCACCGGATGTCGTTGGATACACCAGCTTCATCCCTCAGTGCTTCAG
ATCCTCACGCGCGGCTCCTGGGTGCCTCTTGTCTTGATTTCCTCCTGATA
GAGCTCGTCCCCATGGCGGAGCGCTTAGCGAAAGAACTTGCGTCAGAAGA
GAAGCTACCAGATGATGAAGAAATCCGGGAAACTACATTCTTTCGCCTCG
AATCTCTAGGTTACAGGGTTGGACAAGGGTTGGCTGAACGTATCTATGGT
TTCCATGCGGTGTTATTCGCGGTGCTCTATCAAACCTTGGTATTACAACC
ACAGTTCAAGCGGAATCTACAGAGCTTCCAGGCGCAACCTTCCAAATCAA
AACCGTCAACCCCAAGCCCTGAGGCGTGTATGTCTTGACTGATAACTCTT
TTCGACCATTTGCAAGGATGAGTACGTCTGTTCGAAGTGAGGCGGTATCT
ATGGCCCAAGCGATTCTCGCGCGATCGCCCACGATTTGCAGATAACCTAG
ACATCATAAAGTTCCTGTGCAAGGACTTATGGACGATACTCTTTAAAAAG
CAGGTGGATAACCTGAAAACGAATCACCGGATGTCGTTGGATACACCAGC
TTCATCCCTCAGTGCTTCAGATCCTCACGCGCGGCTCCTGGGTGCCTCTT
GTCTTGATTTCCTCCTGATAGAGCTCGTCCCCATGGCGGAGCGCTTAGCG
AAAGAACTTGCGTCAGAAGAGAAGCTACCAGATGATGAAGAAATCCGGGA
AACTACATTCTTTCGCCTCGAATCTCTAGGTTACAGGGTTGGACAAGGGT
TGGCTGAACGTATCTATGGTTTCCATGCGGTGTTATTCGCGGTGCTCTAT
CAAACCTTGGTATTACAACCACAGTTCAAGCGGAATCTACAGAGCTTCCA
GGCGCAACCTTCCAAATCAAAACCGTCAACCCCAAGCCCTGAGGCGTGTA
TGTCTTGACTGATAACTCTTTTCGACCATTTGCAAGGATGAGTACGTCTG
TTCGAAGTGAGGCGGTATCTATGGCCCAAGCGATTCTCGCGCGATCGCCC
ACGATTTGCAGATAACCTAGACATCATAAAGTTCCTGTGCAAGGACTTAT
GGACGATACTCTTTAAAAAGCAGGTGGATAACCTGAAAACGAATCACCGG
ATGTCGTTGGATACACCAGCTTCATCCCTCAGTGCTTCAGATCCTCACGC
GCGGCTCCTGGGTGCCTCTTGTCTTGATTTCCTCCTGATAGAGCTCGTCC
CCATGGCGGAGCGCTTAGCGAAAGAACTTGCGTCAGAAGAGAAGCTACCA
GATGATGAAGAAATCCGGGAAACTACATTCTTTCGCCTCGAATCTCTAGG
TTACAGGGTTGGACAAGGGTTGGCTGAACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043087regulation of GTPase activity
GO:0048193Golgi vesicle transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_182740M747DRAFT_182740Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182740-T1M747DRAFT_182740-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182740-T1.cdsM747DRAFT_182740-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182740-T1.utr3p1M747DRAFT_182740-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182740-T1.exon4M747DRAFT_182740-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_182740-T1.exon3M747DRAFT_182740-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_182740-T1.exon2M747DRAFT_182740-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_182740-T1.exon1M747DRAFT_182740-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_182740-T1.utr5p1M747DRAFT_182740-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263RY2
DBxrefInterPro:IPR024096
DBxrefInterPro:IPR037992
DBxrefInterPro:IPR007194
DBxrefPFAM:PF04051
Producttransport protein particle component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:833880..835123 -
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