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M747DRAFT_295473-T1, M747DRAFT_295473-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295473-T1
Unique NameM747DRAFT_295473-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:408774..410156+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295473-T1 ID=M747DRAFT_295473-T1|Name=M747DRAFT_295473-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1383bp|location=Sequence derived from alignment at KZ851913.1:408774..410156+ (Aspergillus niger ATCC 13496)
CCTTGCTCCTACTCTGAGCCTGTCACCCCCCAGCTGCGCCTTCCTCCGCC
AATCTCTCTCCGACACAAAATTTGCCATCCGCGCTATTTTGTCTCTTCCC
CTCCGACACGACCGCTCTCCCTCCCATCACCACAATCCCGCCGCTGCATC
CTCTTCAACCACCTCTCACTTTCCCCTCACTTCCTCACTCAACTTTCATA
ATGGCCGCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGC
CGCCCCCGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGA
ATGGAGACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAG
CATCCTTTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGG
CAAGGTACGGATTCTTGCCGAATCAGACGCAGCAGTGGATCAGACAACTA
ACCTTTCCTGTGCGATAGGGCGATAACTGGAATGATCTGTTGAAGGAAGT
CGTGACTTTCAACTCCGTTGAGGAATTCTGGGGTATCTACGTATGTGTTC
TTTTTTTGGGTTCACCGAGGAGACCTGCCCGCTAACCAATGCTTCCATAG
AACAACATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCT
CTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACG
GAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGAC
GACCTGTGGCTGCACGCACAACTGGCCGCTATTGGCGAGACTCTTGAGAA
CGACGGTGACAACGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCT
TCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGA
GACAAGAATGGTCGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACAT
CGGCCGGCGCTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTG
AGTTCTCGGGTCACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAG
GCCAAGTACACTGTCTAAGGTATATAACCTGTGTGTGCAGCTCCATTTAC
GAGGTATTCATTGCGGATCTGTTTCTTTGCTACGGAATAATGGGAAGTCT
TTGTGACGATGGTTGATAACGAATCCGAATGGACCGGCATGAGGAAATGC
GCGTCCGACTTGCTTGCATTTGCAGTTACAGTGGTGGTTCGGTCATAGGC
ACTGATGGCATGTTTCTTTCCCTCAGTACGTATTTCTGACGAGGTTTATA
CCATATTTCATCGAGTTATAGCTTTACGCCTCTAGTGGCCCACAAAATAA
CGAAAAACACTCTTAAAACATCTTATTCTAGTG
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Coding sequence (CDS) from alignment at KZ851913.1:408774..410156+

>M747DRAFT_295473-T1 ID=M747DRAFT_295473-T1|Name=M747DRAFT_295473-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2232bp|location=Sequence derived from alignment at KZ851913.1:408774..410156+ (Aspergillus niger ATCC 13496)
ATGGCCGCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGC
CGCCCCCGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGA
ATGGAGACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAG
CATCCTTTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGG
CAAGGGCGATAACTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACT
CCGTTGAGGAATTCTGGGGTATCTACAACAACATCTCGCCGACATCCGAG
TTGGGCCTCAAAGCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGA
GTGGGAAGACCCCCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCA
AGGACAAGCGCTCCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTG
GCCGCTATTGGCGAGACTCTTGAGAACGACGGTGACAACGAGGTTATGGG
TGTTGTTGTGAACGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTC
GGACTGTTGGCAAGAGTATCCCCGGAGACAAGAATGGTCGCACACCCGCA
CAGGGCAAGGAGATCCTCGAGAACATCGGCCGGCGCTTCAAGGAAGTCCT
TCGTCTCAAGGAGGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCG
CACACAGCGGCAGCACGAGAGCCAAGGCCAAGTACACTGTCTAAATGGCC
GCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCC
CGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAG
ACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCT
TTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGGG
CGATAACTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACTCCGTTG
AGGAATTCTGGGGTATCTACAACAACATCTCGCCGACATCCGAGTTGGGC
CTCAAAGCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGAGTGGGA
AGACCCCCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCAAGGACA
AGCGCTCCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTGGCCGCT
ATTGGCGAGACTCTTGAGAACGACGGTGACAACGAGGTTATGGGTGTTGT
TGTGAACGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTCGGACTG
TTGGCAAGAGTATCCCCGGAGACAAGAATGGTCGCACACCCGCACAGGGC
AAGGAGATCCTCGAGAACATCGGCCGGCGCTTCAAGGAAGTCCTTCGTCT
CAAGGAGGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCGCACACA
GCGGCAGCACGAGAGCCAAGGCCAAGTACACTGTCTAAATGGCCGCTGTT
GCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTTGC
TGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTCTG
TCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGATG
CACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGGGCGATAA
CTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACTCCGTTGAGGAAT
TCTGGGGTATCTACAACAACATCTCGCCGACATCCGAGTTGGGCCTCAAA
GCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCC
CCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCT
CCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTGGCCGCTATTGGC
GAGACTCTTGAGAACGACGGTGACAACGAGGTTATGGGTGTTGTTGTGAA
CGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCA
AGAGTATCCCCGGAGACAAGAATGGTCGCACACCCGCACAGGGCAAGGAG
ATCCTCGAGAACATCGGCCGGCGCTTCAAGGAAGTCCTTCGTCTCAAGGA
GGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCGCACACAGCGGCA
GCACGAGAGCCAAGGCCAAGTACACTGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295473M747DRAFT_295473Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295473-T1M747DRAFT_295473-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295473-T1.utr5p1M747DRAFT_295473-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295473-T1.exon1M747DRAFT_295473-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_295473-T1.exon2M747DRAFT_295473-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295473-T1.exon3M747DRAFT_295473-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295473-T1.cdsM747DRAFT_295473-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295473-T1.utr3p1M747DRAFT_295473-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092646VF
DBxrefInterPro:IPR019770
DBxrefInterPro:IPR001040
DBxrefInterPro:IPR023398
DBxrefPFAM:PF01652
Product mRNA-cap binding subunit
Producttranslation initiation factor 4E
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:408774..410156 +
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