You are here

Home

M747DRAFT_370237-T1, M747DRAFT_370237-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_370237-T1
Unique NameM747DRAFT_370237-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:94741..95917-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_370237-T1 ID=M747DRAFT_370237-T1|Name=M747DRAFT_370237-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1177bp|location=Sequence derived from alignment at KZ851914.1:94741..95917- (Aspergillus niger ATCC 13496)
TCGTGAGGCAAGCAACCTAAACCCAGTGGATCTCCGAAGTACTCATAGCC
CTGCCATGGAGCCTCTCAAGGTCGCATTCCTCGGCCCTGTCGCGTCATTT
TCCCACCAGGTCAGAAATTCATCAGGTTGGATTTCACCATAGTCATATTA
CTAACCAACCCTTTAGGCCGCAGTTGAAAGCTTTGGGTCTTCAGCTGAAC
TTTTACCCCACGTATCGTTTCCGGACGCTTTCGCAGCATTGCAAGGAGGC
AGAGTCGATTATGCTATCATCCCTTGCGAGAACTCAACCAATGGCTCGGT
TGTTCAGACTCTAGATCTCTTGGCGGACCCGAGTGGCCTCTACAGTGATG
TGAAAGTGTGCGGGGAACATTATCTGACAGTTCACCACTGTCTTCTCACT
CGAAAGGGTCTCTTCCCACCTGGTCAGCGAGATTACAGCTCCATCACCAA
GTTATATACCCACCCGCAGGCATGGGGCCAGTGTGATACTTTTCTTGAAA
AAACTTTCAAAGGCATCGAAAGACAAGATGTCTCGTCAACCTCCAAGGGC
GCTGAGATCGTGTCGAAAGAGACGACAGAGCGATGTGGAGCAATAGCTAG
CCGCTTTGCTGCCGAACATCACGGTCTGGATGTATCAGAGGAAAACATTG
AGGACAAGGCCAATAACACCACCCGCTTCCTGGTGCTCAGAAATGTGAAA
TCGGAACGTACAGGCCGGCTGGTCTTCCAATATGTCAACGGTTCCCCAGC
GCAGAGACAGACTTCTACTACACCAACAGCGCAAAAGACTTTGATCTCAT
TCATGATTCGCCAGGACTGCCCGGGTGCTTTGGCAGATGCTCTCTTGATC
TTCAAGGATCGTGGCATGAATCTGACGAGCATAAATTCTCGACCGAGTCA
GATAAGGGCGTGGAAGTATGTATTCCTGGTCGAAGGCCAATACGTCCCAA
CAAGTGAAAATGCGGATGCGGTATCTAAGATCATTGATGGGCTACAATTT
GTAACTGAGGGTTGCAGGCATTTGGGAACATGGGCGGATCAGCTCGTAGA
TGTCTAAGCGTCGTTACTGGTGAGGAAAGGGTGCAGAGGGTTTATAGTGC
TTTTGTAGCTTGCAATACTTCATATAGACACATCGTATCGATACCCGAAT
TAAAAAAAAAAAATGAGTTCTATGAAG
back to top

Coding sequence (CDS) from alignment at KZ851914.1:94741..95917-

>M747DRAFT_370237-T1 ID=M747DRAFT_370237-T1|Name=M747DRAFT_370237-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1890bp|location=Sequence derived from alignment at KZ851914.1:94741..95917- (Aspergillus niger ATCC 13496)
GCCGCAGTTGAAAGCTTTGGGTCTTCAGCTGAACTTTTACCCCACGTATC
GTTTCCGGACGCTTTCGCAGCATTGCAAGGAGGCAGAGTCGATTATGCTA
TCATCCCTTGCGAGAACTCAACCAATGGCTCGGTTGTTCAGACTCTAGAT
CTCTTGGCGGACCCGAGTGGCCTCTACAGTGATGTGAAAGTGTGCGGGGA
ACATTATCTGACAGTTCACCACTGTCTTCTCACTCGAAAGGGTCTCTTCC
CACCTGGTCAGCGAGATTACAGCTCCATCACCAAGTTATATACCCACCCG
CAGGCATGGGGCCAGTGTGATACTTTTCTTGAAAAAACTTTCAAAGGCAT
CGAAAGACAAGATGTCTCGTCAACCTCCAAGGGCGCTGAGATCGTGTCGA
AAGAGACGACAGAGCGATGTGGAGCAATAGCTAGCCGCTTTGCTGCCGAA
CATCACGGTCTGGATGTATCAGAGGAAAACATTGAGGACAAGGCCAATAA
CACCACCCGCTTCCTGGTGCTCAGAAATGTGAAATCGGAACGTACAGGCC
GGCTGGTCTTCCAATATGTCAACGGTTCCCCAGCGCAGAGACAGACTTCT
ACTACACCAACAGCGCAAAAGACTTTGATCTCATTCATGATTCGCCAGGA
CTGCCCGGGTGCTTTGGCAGATGCTCTCTTGATCTTCAAGGATCGTGGCA
TGAATCTGACGAGCATAAATTCTCGACCGAGTCAGATAAGGGCGTGGAAG
TATGTATTCCTGGTCGAAGGCCAATACGTCCCAACAAGTGAAAATGCGGA
TGCGGTATCTAAGATCATTGATGGGCTACAATTTGTAACTGAGGGTTGCA
GGCATTTGGGAACATGGGCGGATCAGCTCGTAGATGTCTAAATGGAGCCT
CTCAAGGTCGCATTCCTCGGCCCTGTCGCGTCATTTTCCCACCAGGCCGC
AGTTGAAAGCTTTGGGTCTTCAGCTGAACTTTTACCCCACGTATCGTTTC
CGGACGCTTTCGCAGCATTGCAAGGAGGCAGAGTCGATTATGCTATCATC
CCTTGCGAGAACTCAACCAATGGCTCGGTTGTTCAGACTCTAGATCTCTT
GGCGGACCCGAGTGGCCTCTACAGTGATGTGAAAGTGTGCGGGGAACATT
ATCTGACAGTTCACCACTGTCTTCTCACTCGAAAGGGTCTCTTCCCACCT
GGTCAGCGAGATTACAGCTCCATCACCAAGTTATATACCCACCCGCAGGC
ATGGGGCCAGTGTGATACTTTTCTTGAAAAAACTTTCAAAGGCATCGAAA
GACAAGATGTCTCGTCAACCTCCAAGGGCGCTGAGATCGTGTCGAAAGAG
ACGACAGAGCGATGTGGAGCAATAGCTAGCCGCTTTGCTGCCGAACATCA
CGGTCTGGATGTATCAGAGGAAAACATTGAGGACAAGGCCAATAACACCA
CCCGCTTCCTGGTGCTCAGAAATGTGAAATCGGAACGTACAGGCCGGCTG
GTCTTCCAATATGTCAACGGTTCCCCAGCGCAGAGACAGACTTCTACTAC
ACCAACAGCGCAAAAGACTTTGATCTCATTCATGATTCGCCAGGACTGCC
CGGGTGCTTTGGCAGATGCTCTCTTGATCTTCAAGGATCGTGGCATGAAT
CTGACGAGCATAAATTCTCGACCGAGTCAGATAAGGGCGTGGAAGTATGT
ATTCCTGGTCGAAGGCCAATACGTCCCAACAAGTGAAAATGCGGATGCGG
TATCTAAGATCATTGATGGGCTACAATTTGTAACTGAGGGTTGCAGGCAT
TTGGGAACATGGGCGGATCAGCTCGTAGATGTCTAAATGGAGCCTCTCAA
GGTCGCATTCCTCGGCCCTGTCGCGTCATTTTCCCACCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004106chorismate mutase activity
GO:0004664prephenate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0009094L-phenylalanine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_370237M747DRAFT_370237Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370237-T1M747DRAFT_370237-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370237-T1.cdsM747DRAFT_370237-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370237-T1.utr3p1M747DRAFT_370237-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370237-T1.exon2M747DRAFT_370237-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_370237-T1.exon1M747DRAFT_370237-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370237-T1.utr5p1M747DRAFT_370237-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002912
DBxrefInterPro:IPR001086
DBxrefInterPro:IPR008242
DBxrefPFAM:PF00800
ProductPDT-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:94741..95917 -
Powered by Drupal