You are here

Home

M747DRAFT_351013-T1, M747DRAFT_351013-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_351013-T1
Unique NameM747DRAFT_351013-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:454301..455724-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_351013-T1 ID=M747DRAFT_351013-T1|Name=M747DRAFT_351013-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1424bp|location=Sequence derived from alignment at KZ851914.1:454301..455724- (Aspergillus niger ATCC 13496)
CTGGATTTCTTCATGATTATGGCAGCGAAAATGGAGGCCATGAAGATGTC
GTGGGACACGGCGGTGATGCCAATGATGGAAGACTCGTGGGAGCCGACTT
TGGATGATCTGGACATGTTCTCTAGCGAATTCCGCAATATGTGGAGTTGG
TGATATCTCTGCAGCTGAGGAACAGTAAGAATACAAGACTTTCCGGTGCT
TACCGATAAGCAGTTTCATAACCCGTTTGCAGGCGGAGGAATCTGAGGCA
GTGTCTGGTCCATCGGAGCGGAGTGTCACAGCTCCCACTCCGATCCAGAT
ATATCTCACATCCTTCTCCATATAAAAGGAGCAGCCATGTCATGACTATA
CTCCCATTGATCTTCTCATCCTCATCAATTCCTCAAGCTTCCCTATTCAT
CTCAATCACCTCCTCTTCACTCCTCCACATCCTCCCATATTTATCCATCA
ACAGCATCATCATCATCACCACCACCACCAACACAACCATGCCCTTCCAC
CCCACCAAAGACATACCGGACCTAACGGGTAAAACCATCCTCATCACCGG
CGCCAACAGCGGCCTAGGCAAGACCTCCGTGCTAGAATTCTCGCGTCACA
ACCCCTCCCAAATTTGGCTCGCCGCGCGCAACCTCACCAAAGCACAATCC
GCGGCGGACGAAATCAAACAACAAGTACCCACAGCCCGCATTCACCTCCT
CGAACTCGACCTCTCTTCCTTCGCCTCCATTCAAAAAGCTGTAGAAGTAT
TCCTCTCCACCGCCACCCGCCTCGACATCCTCATGCTCAACGCCGGCGTC
ATGGCCGCACCACCGGGAATGACGCCCGACGGACGATACGAGGTGCAATT
CGGGACGAATTACATGGGTCATGCGCTGCTCACGAGGCTGCTGTTGCCCA
TTATGGAGAAGACGGCGAAGCGGGATGATGCTGGTGTAGGTGGGCGTGTG
AGGATTGTTGCTGTGGCGTCGCATGGGCAGCGGTATGCGCCGCCTGGAGG
GTTGCAGTTCGAGACGTTCAAGACGAACGGGGAGAGTATGGGCCCGTTTG
CGAGGTATGGGCAGAGTAAGCTGGCTCTTGTGCTTTGGGTGAGGATGTTG
GCGCAGTTGTATCCGTGGTTGACTGCTGCTTCGATTGATCCTGGGGTGGT
GGGCACGACGCTGGGGGATGGGGCTACGGGTGCACCGAGGTATATTCAGT
TTTTGTTCAAGGTGGCGTTGGTGTTGAGGCTCGCGGCAAGTTTGGAAAAC
GGGGTGAGGAATCAGTTATGGGCAGCTGTGTCGAGGGAGGTGAACAGTGG
GGAGTATTATGATCCTGTTGGGGTGGTGGGGAAGTCGGCGCTTGGAAGGG
ATGAGGAGTTGGCGAGGAGATTGTGGGTGTGGACGGAGGGGGAGTTGGAT
AATTATCTGGGGGTAAGGGATTGA
back to top

Coding sequence (CDS) from alignment at KZ851914.1:454301..455724-

>M747DRAFT_351013-T1 ID=M747DRAFT_351013-T1|Name=M747DRAFT_351013-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1083bp|location=Sequence derived from alignment at KZ851914.1:454301..455724- (Aspergillus niger ATCC 13496)
ATGACTATACTCCCATTGATCTTCTCATCCTCATCAATTCCTCAAGCTTC
CCTATTCATCTCAATCACCTCCTCTTCACTCCTCCACATCCTCCCATATT
TATCCATCAACAGCATCATCATCATCACCACCACCACCAACACAACCATG
CCCTTCCACCCCACCAAAGACATACCGGACCTAACGGGTAAAACCATCCT
CATCACCGGCGCCAACAGCGGCCTAGGCAAGACCTCCGTGCTAGAATTCT
CGCGTCACAACCCCTCCCAAATTTGGCTCGCCGCGCGCAACCTCACCAAA
GCACAATCCGCGGCGGACGAAATCAAACAACAAGTACCCACAGCCCGCAT
TCACCTCCTCGAACTCGACCTCTCTTCCTTCGCCTCCATTCAAAAAGCTG
TAGAAGTATTCCTCTCCACCGCCACCCGCCTCGACATCCTCATGCTCAAC
GCCGGCGTCATGGCCGCACCACCGGGAATGACGCCCGACGGACGATACGA
GGTGCAATTCGGGACGAATTACATGGGTCATGCGCTGCTCACGAGGCTGC
TGTTGCCCATTATGGAGAAGACGGCGAAGCGGGATGATGCTGGTGTAGGT
GGGCGTGTGAGGATTGTTGCTGTGGCGTCGCATGGGCAGCGGTATGCGCC
GCCTGGAGGGTTGCAGTTCGAGACGTTCAAGACGAACGGGGAGAGTATGG
GCCCGTTTGCGAGGTATGGGCAGAGTAAGCTGGCTCTTGTGCTTTGGGTG
AGGATGTTGGCGCAGTTGTATCCGTGGTTGACTGCTGCTTCGATTGATCC
TGGGGTGGTGGGCACGACGCTGGGGGATGGGGCTACGGGTGCACCGAGGT
ATATTCAGTTTTTGTTCAAGGTGGCGTTGGTGTTGAGGCTCGCGGCAAGT
TTGGAAAACGGGGTGAGGAATCAGTTATGGGCAGCTGTGTCGAGGGAGGT
GAACAGTGGGGAGTATTATGATCCTGTTGGGGTGGTGGGGAAGTCGGCGC
TTGGAAGGGATGAGGAGTTGGCGAGGAGATTGTGGGTGTGGACGGAGGGG
GAGTTGGATAATTATCTGGGGGTAAGGGATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_351013M747DRAFT_351013Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351013-T1.cdsM747DRAFT_351013-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351013-T1.exon1M747DRAFT_351013-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351013-T1.utr5p1M747DRAFT_351013-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_351013-T1M747DRAFT_351013-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort-chain dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:454301..455724 -
Powered by Drupal