You are here

M747DRAFT_295847-T1, M747DRAFT_295847-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295847-T1
Unique NameM747DRAFT_295847-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851915.1:315389..316428+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295847-T1 ID=M747DRAFT_295847-T1|Name=M747DRAFT_295847-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1040bp|location=Sequence derived from alignment at KZ851915.1:315389..316428+ (Aspergillus niger ATCC 13496)
GATCGTTCCAACATACGCCCATACTTCAAATTCGTTTAACAGTATCTCAT TCGAGACCGCCACAACCACAATGTACCTCCGCGCCATCCACGCCGAATCC CACATCCCAGCCCTCCACCAACTCATTCGCCAAAACCCCCTTGGCATCCT CACAACAGCAATTAAATCCCCCCTCTACCCCCTCCTCCAATCAAGCCACA TCCCCTTCATCATCGACGTCCCCTCATCCGAAGACTCATCAGACGGCACA ATTCCCAATGGCACTCTCCGCGGCCACATGGCCAAACAAAACCCCCAGGC CAAGGCCCTGATGGAAGCACTAGCAGCGCAGCAGCAACAAACCGGCAACA ACACGTCTCTCGAACTTGAAGACGAAGTCCTCGTCCTCTTCACCTCCGAA CACCACCACTACGTCACACCAAAGTTCTACACAGAGACCAAGCCCGCCAC GGGGAAAGTCGTCCCCACATGGAATTATGCTGCTGCGCAAGCATACGGCA AGATCCGGGTTTACTGTGACTCGAAGTCCGAGGAGACGGGGACGTTCTTG CAGAAGGCCGTGGAGGATTTGACGAAGCAGAGTGAGGGGTCTATTATGGG GTATACGGGGACGGAGGGGCGGCCGGGGCCGTGGAAGGTGTCGGATGCGC CGGTGCCGTATGTGGAGATTTTGAAGAAGAATATTATTGGTATTGAGATT AGGATTGAGCGATTGCAGGGCAAGTTTAAGATGAGTCAGGAGATGGGAAA GGGGGATCGCGAGGGGGTGGTTAGTGGGTTTGAGGCGTTGGAGTCGGATG TTGGGAAGGGGGTTGCACAGATGGTGAGGGAGAGAGGGGAGATTAAGGAT GCGCAGAAGTAGGTCTACGGGTTTGCTTGTACGAATGGATGAGTAAAGAT TAAATGATATCTGACTATGTGGGGCGCCATGCATGAAGTGCCGAAGAATG TCACATATCTTAGTGAAAACTTCTGGATAACCGCAGCGGTTGCCTAGCAC ATTTAAGATGATGGAAGTTATCACGCGTATCCTGTCATAA
back to top

Coding sequence (CDS) from alignment at KZ851915.1:315389..316428+

>M747DRAFT_295847-T1 ID=M747DRAFT_295847-T1|Name=M747DRAFT_295847-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=792bp|location=Sequence derived from alignment at KZ851915.1:315389..316428+ (Aspergillus niger ATCC 13496)
ATGTACCTCCGCGCCATCCACGCCGAATCCCACATCCCAGCCCTCCACCA
ACTCATTCGCCAAAACCCCCTTGGCATCCTCACAACAGCAATTAAATCCC
CCCTCTACCCCCTCCTCCAATCAAGCCACATCCCCTTCATCATCGACGTC
CCCTCATCCGAAGACTCATCAGACGGCACAATTCCCAATGGCACTCTCCG
CGGCCACATGGCCAAACAAAACCCCCAGGCCAAGGCCCTGATGGAAGCAC
TAGCAGCGCAGCAGCAACAAACCGGCAACAACACGTCTCTCGAACTTGAA
GACGAAGTCCTCGTCCTCTTCACCTCCGAACACCACCACTACGTCACACC
AAAGTTCTACACAGAGACCAAGCCCGCCACGGGGAAAGTCGTCCCCACAT
GGAATTATGCTGCTGCGCAAGCATACGGCAAGATCCGGGTTTACTGTGAC
TCGAAGTCCGAGGAGACGGGGACGTTCTTGCAGAAGGCCGTGGAGGATTT
GACGAAGCAGAGTGAGGGGTCTATTATGGGGTATACGGGGACGGAGGGGC
GGCCGGGGCCGTGGAAGGTGTCGGATGCGCCGGTGCCGTATGTGGAGATT
TTGAAGAAGAATATTATTGGTATTGAGATTAGGATTGAGCGATTGCAGGG
CAAGTTTAAGATGAGTCAGGAGATGGGAAAGGGGGATCGCGAGGGGGTGG
TTAGTGGGTTTGAGGCGTTGGAGTCGGATGTTGGGAAGGGGGTTGCACAG
ATGGTGAGGGAGAGAGGGGAGATTAAGGATGCGCAGAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0048037obsolete cofactor binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_295847M747DRAFT_295847Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295847-T1.utr5p1M747DRAFT_295847-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295847-T1.exon1M747DRAFT_295847-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295847-T1.cdsM747DRAFT_295847-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295847-T1.utr3p1M747DRAFT_295847-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295847-T1M747DRAFT_295847-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012349
DBxrefInterPro:IPR007396
DBxrefPFAM:PF04299
Productnegative transcriptional regulator
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851915.1supercontigKZ851915.1:315389..316428 +