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M747DRAFT_45562-T1, M747DRAFT_45562-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_45562-T1
Unique NameM747DRAFT_45562-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:328083..329054-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_45562-T1 ID=M747DRAFT_45562-T1|Name=M747DRAFT_45562-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=972bp|location=Sequence derived from alignment at KZ851916.1:328083..329054- (Aspergillus niger ATCC 13496)
TCAGAGGCACAACGTTTGGTGGCTCGTGTCCTTTATTAGCGGCCAGAATC CTCGGGACCGTGGAACAATTCTCTTCAGAATTAACGAGAAGGCAGAATAT AACCATCAGGAAAGACATCCTCAGCCTCGGTTGAGGATTGTCGCCTCTCT CGCTCGCTCGCAACCCGTCCACACCGAGTCCCCGCGGCGAGGAACATGGG GTTGTCGGAGAAAAAGGATAACACTCAGGTGAATCACCACATGGCCATTG TCTTGGGAATCGGACTAGGAGTCGCGACCTTAATCATCATGTGTTTGCTG TGAGTATTTAGCCAGCCCCTAATCATCTTTGTGCCCGATGATGGTCATGA TCGCATTCGCGCCACTAATACCCTAAATTCAATAGTTTGACCCTTTTCGT CAATCGGCGTGATCGCCATCCGGTTCTCAAAAGCAAAGGCAGCTCAAACG ACAAACTACGCAAGCTGGATGCTGTCTCCCCCACTCGGACATTAGAAGAC TGGTGGTCGCGAGCTAAAGGGCCGCTTTTACCGTCCGAAGGTGTTGATGG CGACTTCATATGGTACGTTTAACTTGCATCCGCCGACCAACGGCTGAATT AGCGGCAACGCTAGCAAGTTGTTCGCCCACTAACGATGCCGTTGACAGCG TTGTTTGCCTCGAGTCGGTTCTGCGCTGCCAGGAAATCCGGGAACTCAAA TGTCTGCACGTGTTCCATCGAGAGTGTCTGGAAAAGTGGTATCTGCAAGA CCATTTTAATTGTCCACTCTGCCATAGAGCATATTACGTCCAAGAGACCC ATCCAAGTAATGAGTTTGTGTGGATGGTGTGAATGCGACCGACTTTTTCT CCATGTTCATGCGGCGTTTTGGTGTCTTGTCTGGGTCTGGGCCTTCACCC CGCGCCGGTCTTACTCCACTCAAGTCTTGTCGGTCACGAGGGGCAGCATT GTCTGCTTCTCTTCGGTATTAT
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Coding sequence (CDS) from alignment at KZ851916.1:328083..329054-

>M747DRAFT_45562-T1 ID=M747DRAFT_45562-T1|Name=M747DRAFT_45562-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1395bp|location=Sequence derived from alignment at KZ851916.1:328083..329054- (Aspergillus niger ATCC 13496)
CGTTGTTTGCCTCGAGTCGGTTCTGCGCTGCCAGGAAATCCGGGAACTCA
AATGTCTGCACGTGTTCCATCGAGAGTGTCTGGAAAAGTGGTATCTGCAA
GACCATTTTAATTGTCCACTCTGCCATAGAGCATATTACGTCCAAGAGAC
CCATCCAAGTAATGAGTTTGTGTGGATGGTGTGATTTGACCCTTTTCGTC
AATCGGCGTGATCGCCATCCGGTTCTCAAAAGCAAAGGCAGCTCAAACGA
CAAACTACGCAAGCTGGATGCTGTCTCCCCCACTCGGACATTAGAAGACT
GGTGGTCGCGAGCTAAAGGGCCGCTTTTACCGTCCGAAGGTGTTGATGGC
GACTTCATATGATGGGGTTGTCGGAGAAAAAGGATAACACTCAGGTGAAT
CACCACATGGCCATTGTCTTGGGAATCGGACTAGGAGTCGCGACCTTAAT
CATCATGTGTTTGCTCGTTGTTTGCCTCGAGTCGGTTCTGCGCTGCCAGG
AAATCCGGGAACTCAAATGTCTGCACGTGTTCCATCGAGAGTGTCTGGAA
AAGTGGTATCTGCAAGACCATTTTAATTGTCCACTCTGCCATAGAGCATA
TTACGTCCAAGAGACCCATCCAAGTAATGAGTTTGTGTGGATGGTGTGAT
TTGACCCTTTTCGTCAATCGGCGTGATCGCCATCCGGTTCTCAAAAGCAA
AGGCAGCTCAAACGACAAACTACGCAAGCTGGATGCTGTCTCCCCCACTC
GGACATTAGAAGACTGGTGGTCGCGAGCTAAAGGGCCGCTTTTACCGTCC
GAAGGTGTTGATGGCGACTTCATATGATGGGGTTGTCGGAGAAAAAGGAT
AACACTCAGGTGAATCACCACATGGCCATTGTCTTGGGAATCGGACTAGG
AGTCGCGACCTTAATCATCATGTGTTTGCTCGTTGTTTGCCTCGAGTCGG
TTCTGCGCTGCCAGGAAATCCGGGAACTCAAATGTCTGCACGTGTTCCAT
CGAGAGTGTCTGGAAAAGTGGTATCTGCAAGACCATTTTAATTGTCCACT
CTGCCATAGAGCATATTACGTCCAAGAGACCCATCCAAGTAATGAGTTTG
TGTGGATGGTGTGATTTGACCCTTTTCGTCAATCGGCGTGATCGCCATCC
GGTTCTCAAAAGCAAAGGCAGCTCAAACGACAAACTACGCAAGCTGGATG
CTGTCTCCCCCACTCGGACATTAGAAGACTGGTGGTCGCGAGCTAAAGGG
CCGCTTTTACCGTCCGAAGGTGTTGATGGCGACTTCATATGATGGGGTTG
TCGGAGAAAAAGGATAACACTCAGGTGAATCACCACATGGCCATTGTCTT
GGGAATCGGACTAGGAGTCGCGACCTTAATCATCATGTGTTTGCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_45562M747DRAFT_45562Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45562-T1M747DRAFT_45562-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45562-T1.cdsM747DRAFT_45562-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45562-T1.utr3p1M747DRAFT_45562-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45562-T1.exon3M747DRAFT_45562-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_45562-T1.exon2M747DRAFT_45562-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_45562-T1.exon1M747DRAFT_45562-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45562-T1.utr5p1M747DRAFT_45562-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001841
DBxrefPFAM:PF13639
DBxrefPFAM:PF17123
DBxrefPFAM:PF00097
ProductRING finger domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:328083..329054 -