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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851919.1:119258..121208+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_371188-T1 ID=M747DRAFT_371188-T1|Name=M747DRAFT_371188-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1951bp|location=Sequence derived from alignment at KZ851919.1:119258..121208+ (Aspergillus niger ATCC 13496)
AGGGAAGCAATGGGTGGGAGGAGACGGGGATAGGATTGGGGTCATCCGAG
AGGGGAAAGTCAAGATCCACGGAGAGCGAGCGGGACTTTTGCCAGGCACT
CGGAATCGTCTAACCTTCTCTCTTTTGTTCGACTTCCTCCTTTCGCTTTC
CCTATCCATCGGCAACTGCGATTCTTTCTGCCATCTTTCTCTTCGACATG
TCCCCATTTCGAGCAAGAAACCCACTTTTCCAGATGTTCCCCGGATCCTC
TCATCCTCCCCCCGCAATCGCCGATCAATCGTTCCACTGTGGATAAGACG
TCTGGCAGGCGGAGAATGGCACTCTTGGTGGAGTCCCCCTCAGCATCGTC
CAACGATATCCGAGTCTGGTGCAGCTGCGCCGCCTATCTCATCCCGCTCT
CTCATCGACAGTTACACTTTCCCGATACAGCCCCCACCAGACCAGAAGTC
CCAAAAGTCGAGCAGCTCTTCTTCCTGCATCTTAATTGGCTTGAGACCAC
ATGTTCTCGTTGCCTGCTATGTTTGGAGAGGTGTGCTAAATACAGGCCTC
TAAAGAGTCAATCCGTCCGTCGTTCCGCATATAAGGCTCTTGAAACCCCA
GCTGTTGGCCTCGAGTCGTGCTTCTATCCTTCTTTCTTTAATTTACTTCG
TATCAGACCATCTTCTCTTCTTATCGGACCTATCACAATGATCGCTCCTA
CTGAGCCCGTTCTCTCCTCCAATTCGGCCACCCCCATCACCCAGTTCCAC
CCTGAAATCACTCGGGAGGCTTTGGAGGAAAAGGTCATTCTCATTGTGGG
TACGTGTTTCCCATTGTGTCTTCCATCACTCATCCATTATCAATGCTAAC
CCACGTTTGGAACAGGAGGTGCCAATGGTATCGGCGCTAGTCTTGTCGAG
CTTTGCTGTGAAAACAACGCCTACGTATGCATTGGCGACATTGATTCTAC
TGCCGGTGTACCCTTGAGCCGGAAGTGTCGCGAGAAATGGCCTGTCTACT
GGGACCCCTCTGGTCCCCCGAAACCTCCGCGCTCCTCCTTCCAAGAGACC
GATATCACAAACTACCAATCTGTGCTGGATCTCTTTGACTTTACGTTCAA
GACCTACAAGCGCATTGACCATGTCGTCGTTACTGCTGGCAGTATGGAAC
CAAAGGAGAATTGGTTTGACAATGCTCTAAGCCTTCAGGCTGTGCGCGAG
GTAAGCTACCCACAGCACCTACCTCCTGAGTGATCTTGCTAACAATGATA
AGCCCCCATCCACCAGAGACCTCGACGTCAACCTCACTGGAACTCTCTAC
GTCGTTCGTCTCGCTGGCGCCTACCTCCGCCACAACCGTGGCCCGGGTGT
GGATCGCTCCATCACTCTTTTCTCTTGCGCCGCAGGGTTCAAGGAGACCC
CGGGAGTGTCTGTTTACCAGGCAGCCAAGCACGGTGTGCAAGGCCTGATG
CGCTCGCTGCGTCCCTATTTTATCCACCCTTACAAGCACAACCTTCGCAT
TAACACCATCTGCCCCTGGATGACCCAGACTCATCCTGCTGTAACGAAGA
AACTGTGCGACCGATGGGAAGAGGAGGGTCTCCCCATCAGCTCTCCCCTC
CAGGTCGCTCAGGTGGCTGCTGGTGTCCTCGTGGACGACTCACTGAACGG
CACCTCTATGTACGTCGAGGGTGGCCGCGCCTGGGAAATCGAGGCGAACC
TTGATCGTCTCGAGCCACAATGGCTAGGTGAAGTCCCTGCGAAGACTCTT
GCTCGGGGACAGAAGGTGTTGAAAGATGCCTGGGCTGCATGAGAAATGCC
CACCACACGACTACTAAAAATACCTTTTCCGGTGATACCCATAGCGTTGG
CCAGGCTGGACACTTGGTCAAATTTCCTTGATATATGATAGGTATACTAT
CAACTATATAAAGAAAAGAATGTATGTATGAAGTTATGACAAATAAATGA
C back to topCoding sequence (CDS) from alignment at KZ851919.1:119258..121208+ >M747DRAFT_371188-T1 ID=M747DRAFT_371188-T1|Name=M747DRAFT_371188-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4077bp|location=Sequence derived from alignment at KZ851919.1:119258..121208+ (Aspergillus niger ATCC 13496)
ATGGCACTCTTGGTGGAGTCCCCCTCAGCATCGTCCAACGATATCCGAGT
CTGGTGCAGCTGCGCCGCCTATCTCATCCCGCTCTCTCATCGACAGTTAC
ACTTTCCCGATACAGCCCCCACCAGACCAGAAGTCCCAAAAGTCGAGCAG
CTCTTCTTCCTGCATCTTAATTGGCTTGAGACCACATGTTCTCGTTGCCT
GCTATGTTTGGAGAGGTGTGCTAAATACAGGCCTCTAAAGAGTCAATCCG
TCCGTCGTTCCGCATATAAGGCTCTTGAAACCCCAGCTGTTGGCCTCGAG
TCGTGCTTCTATCCTTCTTTCTTTAATTTACTTCGTATCAGACCATCTTC
TCTTCTTATCGGACCTATCACAATGATCGCTCCTACTGAGCCCGTTCTCT
CCTCCAATTCGGCCACCCCCATCACCCAGTTCCACCCTGAAATCACTCGG
GAGGCTTTGGAGGAAAAGGTCATTCTCATTGTGGGAGGTGCCAATGGTAT
CGGCGCTAGTCTTGTCGAGCTTTGCTGTGAAAACAACGCCTACGTATGCA
TTGGCGACATTGATTCTACTGCCGGTGTACCCTTGAGCCGGAAGTGTCGC
GAGAAATGGCCTGTCTACTGGGACCCCTCTGGTCCCCCGAAACCTCCGCG
CTCCTCCTTCCAAGAGACCGATATCACAAACTACCAATCTGTGCTGGATC
TCTTTGACTTTACGTTCAAGACCTACAAGCGCATTGACCATGTCGTCGTT
ACTGCTGGCAGTATGGAACCAAAGGAGAATTGGTTTGACAATGCTCTAAG
CCTTCAGGCTGTGCGCGAGCCCCCATCCACCAGAGACCTCGACGTCAACC
TCACTGGAACTCTCTACGTCGTTCGTCTCGCTGGCGCCTACCTCCGCCAC
AACCGTGGCCCGGGTGTGGATCGCTCCATCACTCTTTTCTCTTGCGCCGC
AGGGTTCAAGGAGACCCCGGGAGTGTCTGTTTACCAGGCAGCCAAGCACG
GTGTGCAAGGCCTGATGCGCTCGCTGCGTCCCTATTTTATCCACCCTTAC
AAGCACAACCTTCGCATTAACACCATCTGCCCCTGGATGACCCAGACTCA
TCCTGCTGTAACGAAGAAACTGTGCGACCGATGGGAAGAGGAGGGTCTCC
CCATCAGCTCTCCCCTCCAGGTCGCTCAGGTGGCTGCTGGTGTCCTCGTG
GACGACTCACTGAACGGCACCTCTATGTACGTCGAGGGTGGCCGCGCCTG
GGAAATCGAGGCGAACCTTGATCGTCTCGAGCCACAATGGCTAGGTGAAG
TCCCTGCGAAGACTCTTGCTCGGGGACAGAAGGTGTTGAAAGATGCCTGG
GCTGCATGAATGGCACTCTTGGTGGAGTCCCCCTCAGCATCGTCCAACGA
TATCCGAGTCTGGTGCAGCTGCGCCGCCTATCTCATCCCGCTCTCTCATC
GACAGTTACACTTTCCCGATACAGCCCCCACCAGACCAGAAGTCCCAAAA
GTCGAGCAGCTCTTCTTCCTGCATCTTAATTGGCTTGAGACCACATGTTC
TCGTTGCCTGCTATGTTTGGAGAGGTGTGCTAAATACAGGCCTCTAAAGA
GTCAATCCGTCCGTCGTTCCGCATATAAGGCTCTTGAAACCCCAGCTGTT
GGCCTCGAGTCGTGCTTCTATCCTTCTTTCTTTAATTTACTTCGTATCAG
ACCATCTTCTCTTCTTATCGGACCTATCACAATGATCGCTCCTACTGAGC
CCGTTCTCTCCTCCAATTCGGCCACCCCCATCACCCAGTTCCACCCTGAA
ATCACTCGGGAGGCTTTGGAGGAAAAGGTCATTCTCATTGTGGGAGGTGC
CAATGGTATCGGCGCTAGTCTTGTCGAGCTTTGCTGTGAAAACAACGCCT
ACGTATGCATTGGCGACATTGATTCTACTGCCGGTGTACCCTTGAGCCGG
AAGTGTCGCGAGAAATGGCCTGTCTACTGGGACCCCTCTGGTCCCCCGAA
ACCTCCGCGCTCCTCCTTCCAAGAGACCGATATCACAAACTACCAATCTG
TGCTGGATCTCTTTGACTTTACGTTCAAGACCTACAAGCGCATTGACCAT
GTCGTCGTTACTGCTGGCAGTATGGAACCAAAGGAGAATTGGTTTGACAA
TGCTCTAAGCCTTCAGGCTGTGCGCGAGCCCCCATCCACCAGAGACCTCG
ACGTCAACCTCACTGGAACTCTCTACGTCGTTCGTCTCGCTGGCGCCTAC
CTCCGCCACAACCGTGGCCCGGGTGTGGATCGCTCCATCACTCTTTTCTC
TTGCGCCGCAGGGTTCAAGGAGACCCCGGGAGTGTCTGTTTACCAGGCAG
CCAAGCACGGTGTGCAAGGCCTGATGCGCTCGCTGCGTCCCTATTTTATC
CACCCTTACAAGCACAACCTTCGCATTAACACCATCTGCCCCTGGATGAC
CCAGACTCATCCTGCTGTAACGAAGAAACTGTGCGACCGATGGGAAGAGG
AGGGTCTCCCCATCAGCTCTCCCCTCCAGGTCGCTCAGGTGGCTGCTGGT
GTCCTCGTGGACGACTCACTGAACGGCACCTCTATGTACGTCGAGGGTGG
CCGCGCCTGGGAAATCGAGGCGAACCTTGATCGTCTCGAGCCACAATGGC
TAGGTGAAGTCCCTGCGAAGACTCTTGCTCGGGGACAGAAGGTGTTGAAA
GATGCCTGGGCTGCATGAATGGCACTCTTGGTGGAGTCCCCCTCAGCATC
GTCCAACGATATCCGAGTCTGGTGCAGCTGCGCCGCCTATCTCATCCCGC
TCTCTCATCGACAGTTACACTTTCCCGATACAGCCCCCACCAGACCAGAA
GTCCCAAAAGTCGAGCAGCTCTTCTTCCTGCATCTTAATTGGCTTGAGAC
CACATGTTCTCGTTGCCTGCTATGTTTGGAGAGGTGTGCTAAATACAGGC
CTCTAAAGAGTCAATCCGTCCGTCGTTCCGCATATAAGGCTCTTGAAACC
CCAGCTGTTGGCCTCGAGTCGTGCTTCTATCCTTCTTTCTTTAATTTACT
TCGTATCAGACCATCTTCTCTTCTTATCGGACCTATCACAATGATCGCTC
CTACTGAGCCCGTTCTCTCCTCCAATTCGGCCACCCCCATCACCCAGTTC
CACCCTGAAATCACTCGGGAGGCTTTGGAGGAAAAGGTCATTCTCATTGT
GGGAGGTGCCAATGGTATCGGCGCTAGTCTTGTCGAGCTTTGCTGTGAAA
ACAACGCCTACGTATGCATTGGCGACATTGATTCTACTGCCGGTGTACCC
TTGAGCCGGAAGTGTCGCGAGAAATGGCCTGTCTACTGGGACCCCTCTGG
TCCCCCGAAACCTCCGCGCTCCTCCTTCCAAGAGACCGATATCACAAACT
ACCAATCTGTGCTGGATCTCTTTGACTTTACGTTCAAGACCTACAAGCGC
ATTGACCATGTCGTCGTTACTGCTGGCAGTATGGAACCAAAGGAGAATTG
GTTTGACAATGCTCTAAGCCTTCAGGCTGTGCGCGAGCCCCCATCCACCA
GAGACCTCGACGTCAACCTCACTGGAACTCTCTACGTCGTTCGTCTCGCT
GGCGCCTACCTCCGCCACAACCGTGGCCCGGGTGTGGATCGCTCCATCAC
TCTTTTCTCTTGCGCCGCAGGGTTCAAGGAGACCCCGGGAGTGTCTGTTT
ACCAGGCAGCCAAGCACGGTGTGCAAGGCCTGATGCGCTCGCTGCGTCCC
TATTTTATCCACCCTTACAAGCACAACCTTCGCATTAACACCATCTGCCC
CTGGATGACCCAGACTCATCCTGCTGTAACGAAGAAACTGTGCGACCGAT
GGGAAGAGGAGGGTCTCCCCATCAGCTCTCCCCTCCAGGTCGCTCAGGTG
GCTGCTGGTGTCCTCGTGGACGACTCACTGAACGGCACCTCTATGTACGT
CGAGGGTGGCCGCGCCTGGGAAATCGAGGCGAACCTTGATCGTCTCGAGC
CACAATGGCTAGGTGAAGTCCCTGCGAAGACTCTTGCTCGGGGACAGAAG
GTGTTGAAAGATGCCTGGGCTGCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | 3-hydroxyacyl-CoA dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851919.1 | supercontig | KZ851919.1:119258..121208 + |
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