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M747DRAFT_297088-T1, M747DRAFT_297088-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297088-T1
Unique NameM747DRAFT_297088-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851922.1:573809..576251-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297088-T1 ID=M747DRAFT_297088-T1|Name=M747DRAFT_297088-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2443bp|location=Sequence derived from alignment at KZ851922.1:573809..576251- (Aspergillus niger ATCC 13496)
CATCTTTCTTGTTCTTTGCCGTTTATCTGCTACTAATTGCATACCATATT
GTGTGGGATTGGTATTCCCTGCTTGCATTCAATACTATTGTATCGCAGTT
AGGTCTTCTTCGTCCTGTGTCCAAGCCAGCGTGTGACTGGGATTGGCCCT
GCAAACGGATCTTGGAGGCATTTCTCTCTCGATACCCTCCCCTATCTCTC
GAAAAGTAAATATATATCAGCATGGCTACACCTACAGTATCGACTCCCGT
GAAGACCCACCATGGGATCTTCTCCACCAAGACGGCTGGTGGCCGCATGC
CCCTTACACCTTCACCACGCACTCGCGCAGGAAGTGTGACGTCAAACCAC
TCTTCCCCATTCACACCTCCCTGTGGTGCTCAAGAATCAGGCAAGGAGCA
TGGAAAGTCCGTCTACGGTGGTAACCTCTCTTCATACTTCGCCAAGTCTG
TCTCGAGGACAGCCCGCAACTACCGCGAATCCCCCAAGTCCAACATCGCC
CGTGCTCGCACACGCAAGTCTCCCAGACACCTTGAGCTGGGTGTATCAGA
ATGGGCCCTGACAGGCACCGGTCCATCATCACGGACTCCTACCAAGGAGC
GCCTACGAAAAGAGGTCGTGGGGAAGGAAGTGGCCAAGGAGGTGACCAGA
AAAGAACCGCCGAAGAAGGAGGTAGTCAAGAAGGAGGCAGTCAAGAAGGA
GGTGTCGAGGAAAGAAGCGCCAAGAAAGGAGATCACCACTCGGACCACGA
GGTCAGGAAAGACGACCGTCCGCATTCCCCACAACGCGGGTGACAGATTC
ATTCCGAACCGTACTGCCAGTGAGGGTCTTGTAACTGCCGGCACAGCCAA
GCCAGAGGAAAGCCAACGGCCAAAGACCAGCAGCAGTGATGGATCCTCTG
TCCTTGCCAATGCCGCGAGTGCCTTTGACATTGGTGGCCGCGGAACTGAT
GAAGACATCACCGCAGCTCTTGAAAGCCTTGGGCTCGAGGATAACGAGCC
AACGACCTCATACACCAAGCCAGCACCGGATGCTGTCGCGTACGAGTCAT
CGTTGGCAGATGCCTGTGGTGTGAATCTGAACACTCGCATCCTGGCCTTC
AAACCGCCACCCCCAGAGTCATCCAAGCCCATTGATCTGCGCGCTCAGTA
CAACCGCCCTCTCAAGCCTGCCAAATCCCAGTCAGCTCAGTTCCGCCGAC
GGGTCCAAACGGCTCCTGAGCGTGTTCTGGACGCCCCTGGACTTCTTGAC
GATTACTATCTCAATTTGCTGGATTGGAGCTCTGGCAACCAGGTTGCAAT
TGGCTTGGAGCGCAATGTTTACGTATGGTCCGCCGATTCAGGATCGGTCA
GCTGCCTACTGGAGACTGCACCCGACACCTACGTGAGCAGTGTGAAGTGG
AGTGGTGATGGCGCCTACGTCGGTGTCGGCCTTGGAACTGGTGAAGTCCA
AATTTGGGATGTTGAGGAAGGAACCAAGCTTCGCAGTATGTTTGGCCATG
ACTCTCGTGTAGGTGTCATGGGCTGGTCTAAGCACACACTGTCTACCGGT
GCCCGCAGTGGTCTGGTATTCAACCATGATGTTCGTATTGCACAGCACAA
GGTTGCTGAGCTGGTCTCGCATACCTCTGAAGTCTGTGGTCTGGAATGGA
GACCCGATGGTGCTCAGCTCGCCACCGGTGGTAACGACAATCTGGTTAAC
ATCTGGGATGCTCGCTCTCTCAGCGCGCCCAAGTTCACCAAGACCAACCA
CCGCGCTGCCGTTAAGGCCCTCAGTTGGTGCCCCTGGCAGTTGAACCTGC
TTGCCACTGGTGGAGGTTCCTATGACCGCCACATCCACTTCTGGAACACT
ACCACTGGTGCTCGCACCAACAGCATCGACACCGGCTCCCAGGTCACCAG
CTTGAGATGGAGCAACCACTACCGCGAGATTGTTAGCTCGAGTGGATTCC
CCGACAACTCGTTGAGCATCTGGAGCTATCCCACTCTGGTTCGGAACGTT
GAGATTCCGGCCCACGAGACTCGTGTACTGCACAGCTGTCTTAGCCCAGA
TGGGCAACTCCTGGCCACCGCAGCCGCTGACGAGAGTTTGAAGTTCTGGA
AGATCTTCGAGCGCAAGCCTGGAACCACCGCTGCTGCCTCTCGGGAGGGT
GGTGTTGGCAGCAAGGCTCAGATGACCAAATCCATGACCATCCGGTAAAT
GGGTTGGTTGTCTTTCAACTCTTCTCATCTTGTTAATTATTTTCCTTCTT
CGATGACTATATTTCGGGTTCGGTATCGTAGACCGGTTCTGTCTAGATAT
CATTGGTTCTATCGGTGTTCATTACATTGGGGGCACATATTCGGATCCAT
GGGATGGAAGGGGTGTTATTGGTAACTGGCGTTTGTATCTAGGTTTGACC
GTATAATAGCTGTCAGGATTCTTGTATAGAAAGTTGCATACTC
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Coding sequence (CDS) from alignment at KZ851922.1:573809..576251-

>M747DRAFT_297088-T1 ID=M747DRAFT_297088-T1|Name=M747DRAFT_297088-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1977bp|location=Sequence derived from alignment at KZ851922.1:573809..576251- (Aspergillus niger ATCC 13496)
ATGGCTACACCTACAGTATCGACTCCCGTGAAGACCCACCATGGGATCTT
CTCCACCAAGACGGCTGGTGGCCGCATGCCCCTTACACCTTCACCACGCA
CTCGCGCAGGAAGTGTGACGTCAAACCACTCTTCCCCATTCACACCTCCC
TGTGGTGCTCAAGAATCAGGCAAGGAGCATGGAAAGTCCGTCTACGGTGG
TAACCTCTCTTCATACTTCGCCAAGTCTGTCTCGAGGACAGCCCGCAACT
ACCGCGAATCCCCCAAGTCCAACATCGCCCGTGCTCGCACACGCAAGTCT
CCCAGACACCTTGAGCTGGGTGTATCAGAATGGGCCCTGACAGGCACCGG
TCCATCATCACGGACTCCTACCAAGGAGCGCCTACGAAAAGAGGTCGTGG
GGAAGGAAGTGGCCAAGGAGGTGACCAGAAAAGAACCGCCGAAGAAGGAG
GTAGTCAAGAAGGAGGCAGTCAAGAAGGAGGTGTCGAGGAAAGAAGCGCC
AAGAAAGGAGATCACCACTCGGACCACGAGGTCAGGAAAGACGACCGTCC
GCATTCCCCACAACGCGGGTGACAGATTCATTCCGAACCGTACTGCCAGT
GAGGGTCTTGTAACTGCCGGCACAGCCAAGCCAGAGGAAAGCCAACGGCC
AAAGACCAGCAGCAGTGATGGATCCTCTGTCCTTGCCAATGCCGCGAGTG
CCTTTGACATTGGTGGCCGCGGAACTGATGAAGACATCACCGCAGCTCTT
GAAAGCCTTGGGCTCGAGGATAACGAGCCAACGACCTCATACACCAAGCC
AGCACCGGATGCTGTCGCGTACGAGTCATCGTTGGCAGATGCCTGTGGTG
TGAATCTGAACACTCGCATCCTGGCCTTCAAACCGCCACCCCCAGAGTCA
TCCAAGCCCATTGATCTGCGCGCTCAGTACAACCGCCCTCTCAAGCCTGC
CAAATCCCAGTCAGCTCAGTTCCGCCGACGGGTCCAAACGGCTCCTGAGC
GTGTTCTGGACGCCCCTGGACTTCTTGACGATTACTATCTCAATTTGCTG
GATTGGAGCTCTGGCAACCAGGTTGCAATTGGCTTGGAGCGCAATGTTTA
CGTATGGTCCGCCGATTCAGGATCGGTCAGCTGCCTACTGGAGACTGCAC
CCGACACCTACGTGAGCAGTGTGAAGTGGAGTGGTGATGGCGCCTACGTC
GGTGTCGGCCTTGGAACTGGTGAAGTCCAAATTTGGGATGTTGAGGAAGG
AACCAAGCTTCGCAGTATGTTTGGCCATGACTCTCGTGTAGGTGTCATGG
GCTGGTCTAAGCACACACTGTCTACCGGTGCCCGCAGTGGTCTGGTATTC
AACCATGATGTTCGTATTGCACAGCACAAGGTTGCTGAGCTGGTCTCGCA
TACCTCTGAAGTCTGTGGTCTGGAATGGAGACCCGATGGTGCTCAGCTCG
CCACCGGTGGTAACGACAATCTGGTTAACATCTGGGATGCTCGCTCTCTC
AGCGCGCCCAAGTTCACCAAGACCAACCACCGCGCTGCCGTTAAGGCCCT
CAGTTGGTGCCCCTGGCAGTTGAACCTGCTTGCCACTGGTGGAGGTTCCT
ATGACCGCCACATCCACTTCTGGAACACTACCACTGGTGCTCGCACCAAC
AGCATCGACACCGGCTCCCAGGTCACCAGCTTGAGATGGAGCAACCACTA
CCGCGAGATTGTTAGCTCGAGTGGATTCCCCGACAACTCGTTGAGCATCT
GGAGCTATCCCACTCTGGTTCGGAACGTTGAGATTCCGGCCCACGAGACT
CGTGTACTGCACAGCTGTCTTAGCCCAGATGGGCAACTCCTGGCCACCGC
AGCCGCTGACGAGAGTTTGAAGTTCTGGAAGATCTTCGAGCGCAAGCCTG
GAACCACCGCTGCTGCCTCTCGGGAGGGTGGTGTTGGCAGCAAGGCTCAG
ATGACCAAATCCATGACCATCCGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297088M747DRAFT_297088Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297088-T1.cdsM747DRAFT_297088-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297088-T1.utr3p1M747DRAFT_297088-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297088-T1.exon1M747DRAFT_297088-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297088-T1.utr5p1M747DRAFT_297088-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297088-T1M747DRAFT_297088-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR024977
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
ProductWD repeat-containing protein slp1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851922.1supercontigKZ851922.1:573809..576251 -
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