You are here

Home

M747DRAFT_297263-T1, M747DRAFT_297263-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297263-T1
Unique NameM747DRAFT_297263-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851924.1:356091..357442-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297263-T1 ID=M747DRAFT_297263-T1|Name=M747DRAFT_297263-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1352bp|location=Sequence derived from alignment at KZ851924.1:356091..357442- (Aspergillus niger ATCC 13496)
GACAACCCGTACGATACGACACGAAGCCGCCCACCATGGTATGTTGAATG
CGCCATGCTGCTATTCGCAGTTTTTGATTCTGCGTGAAAAAAGTGAAATG
CTGACGGGAGTTTTTCTATTTGAAGTCGTCCAAGGTCAAGGCTGGTCAGC
TCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGAATTGAAG
ACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTGCCTCCTC
GAAGACCCACAGAATGTGCGTTTGAAAAGAATTCATCTGATTTTCTCCTG
CGAACCCCTCATGTGTGTGCGTTGTGTGTGGTGTGTGAAGGATATGAGAT
TTGCACCTGTCGGATTGTGGATTACGGCGGGAGGAAGGAAACGACAACGA
CATTCGACAATTGGAAAAATGAGACGACGCATACCAGTCAAGAACAGAAA
TCCCGACAACCCATGAAATCGACCTACAATAAGGAAACGAGGGGTACACG
ACCGAACGACAACAAGATCCAAGCCGAGAAGAAACTTTCCGACAGGGCGC
AAAATCCAACATATCTACCACCTACATGAAAAAATGGGCACACATGCGCA
GTGAACCAGGAACAAGAACAGGGATGCTGATATACCGTCTTTTAACAGCC
ACGACGTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCAACGCCAAC
CAGCGCGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTACACTCCTCT
TGACCTCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCTCACCAAGC
ACGAGGCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGATCCACTTC
CCCCAGCGGAAGTACGCTGTTAAGGTACGACCTGCCCAACATACCTGAAT
ATATGACCCCGCGGGGGAAAATATGAAGGACATTGGCTAACTGAAATTGC
AACAGGCTTAAATGCTTAAGACGGGGTCGTCTCTGGATCTGGATGGAGTT
AACGGGAACGTCGTTTAATGATGACGGGTTGACCTAACCTTGCCGTGAGG
GGGGTCGGATTCATCAAAACGGTTTCTTTTGAAAAAAGAAATCGATTATG
TATCTTAGAAAAAAGAAGATGCAGATCGATGTTTTTAAATGAAGGCCTTG
CTTGACATGACATGAGATAAAGATTCTTATTATTGGTATTGTGGTAGTTG
CGGAGTACTGTGATCATCTTGTCTCCCTGGGTAGTGCTTTTGTTTTCCCC
CGCTCTCGAGTAGTATAGTCTATCTTGTACGACTGTCCATATGCAACAAT
TATTATTCATTGGGTATGGTCTTTGAAGTCGACATACGTCCACATGTTAT
GA
back to top

Coding sequence (CDS) from alignment at KZ851924.1:356091..357442-

>M747DRAFT_297263-T1 ID=M747DRAFT_297263-T1|Name=M747DRAFT_297263-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1500bp|location=Sequence derived from alignment at KZ851924.1:356091..357442- (Aspergillus niger ATCC 13496)
GCTTAACCACGACGTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCA
ACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTAC
ACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCT
CACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGA
TCCACTTCCCCCAGCGGAAGTACGCTGTTAAGTCGTCCAAGGTCAAGGCT
GGTCAGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGA
ATTGAAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTG
CCTCCTCGAAGACCCACAGAATATGGCTTAACCACGACGTTCGCAAGTCG
ATCGCTCGCGTTCTGACCGTCATCAACGCCAACCAGCGCGCTCAGCTCCG
CTTGTTCTACAAGAGCAAGAAGTACACTCCTCTTGACCTCCGCCCCAAGC
TCACCCGTGCTCTCCGCCGCCGTCTCACCAAGCACGAGGCTACCCTGAAG
ACCGAGCGCAAGCGCAAGCAGGAGATCCACTTCCCCCAGCGGAAGTACGC
TGTTAAGTCGTCCAAGGTCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGG
ATGACCTCACCAAGCAGCTGGAGGAATTGAAGACCGAGCTGAGCCAGCTC
CGTGTCCAGAAGATCGCTGGCGGTGCCTCCTCGAAGACCCACAGAATATG
GCTTAACCACGACGTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCA
ACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTAC
ACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCT
CACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGA
TCCACTTCCCCCAGCGGAAGTACGCTGTTAAGTCGTCCAAGGTCAAGGCT
GGTCAGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGA
ATTGAAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTG
CCTCCTCGAAGACCCACAGAATATGGCTTAACCACGACGTTCGCAAGTCG
ATCGCTCGCGTTCTGACCGTCATCAACGCCAACCAGCGCGCTCAGCTCCG
CTTGTTCTACAAGAGCAAGAAGTACACTCCTCTTGACCTCCGCCCCAAGC
TCACCCGTGCTCTCCGCCGCCGTCTCACCAAGCACGAGGCTACCCTGAAG
ACCGAGCGCAAGCGCAAGCAGGAGATCCACTTCCCCCAGCGGAAGTACGC
TGTTAAGTCGTCCAAGGTCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGG
ATGACCTCACCAAGCAGCTGGAGGAATTGAAGACCGAGCTGAGCCAGCTC
CGTGTCCAGAAGATCGCTGGCGGTGCCTCCTCGAAGACCCACAGAATATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL35M747DRAFT_297263Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297263-T1M747DRAFT_297263-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297263-T1.cdsM747DRAFT_297263-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297263-T1.utr3p1M747DRAFT_297263-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297263-T1.exon4M747DRAFT_297263-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297263-T1.exon3M747DRAFT_297263-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297263-T1.exon2M747DRAFT_297263-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297263-T1.exon1M747DRAFT_297263-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297263-T1.utr5p1M747DRAFT_297263-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265FTY
DBxrefInterPro:IPR036049
DBxrefInterPro:IPR001854
DBxrefPFAM:PF00831
Product60S ribosomal protein L35
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851924.1supercontigKZ851924.1:356091..357442 -
Powered by Drupal