You are here

Home

M747DRAFT_284202-T1, M747DRAFT_284202-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_284202-T1
Unique NameM747DRAFT_284202-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851927.1:234441..235826-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_284202-T1 ID=M747DRAFT_284202-T1|Name=M747DRAFT_284202-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1386bp|location=Sequence derived from alignment at KZ851927.1:234441..235826- (Aspergillus niger ATCC 13496)
ACTCAACCACAATCGGTCACATTTCAGCATATCATCATCATGGCGGACGC
TCAATTCGATAGTGCGCTGTAAGTGTTATGGCTCTGTTTTTGTTTCAAGA
CTATGAAGCCTGCATAGCCTCTGGGTGCAATCATTCCACGCGGTCAACCC
CGCTTGTTGCCTCCCGCTGACTATCATACCTGCTTCCAGGGACCTGCTCC
GGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATCACCTCC
ATCGTTCCCGACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCT
AGAAATCCGCAAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACT
ACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGAT
CCCCCGTTGGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGA
GGTCGCCGCCAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGG
GTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGC
GTTATCCTATTGAAGAAGGGTGAGCGAGTGATGTCTTGATACTTTCAGGC
TGGAAATACGTGCTGATATCTCGCCATTATAGGAGTTACGCCAGGTGCTA
AGAGCTCTGGGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGA
GCGCGCATGTCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGC
TAATGAAACTGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCC
GCCAGGTGGAGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCC
AATGTTGGTCGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCT
GCGTATGTCTTTTTTCTTAGCTATTGTGGCGCGAGAGTTGTTACATTTCT
GGGCTGCTTGCTAATTGAAATGTCCTTACAGAGGAGGTATACTTCGGCAA
GGCTAAGGATGTCGTGGGTGAACTTCGGAGTAAGTGCAGTCTAACCAGCT
GGTGGGCAATGCCAGACTAACAAGCGAAACAGGTCTCCCCTCCTTGTCCG
AGTCGAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCAC
AGCTAGTCGTCTGTTTGTCAGTTAAGGAAGCCATTATAGCGTCATTTTAG
AGGCTGTTATTCATTTACATTTGTTGTATGTACTTCGAGCTCAAGGTTCC
TGGGGATCCCAATATTACTCGTATACGATGAACTGCAAGTGCTATGCGAT
CGTATATTGTAAATACCGTACACTATGTGATGGCATGGCTAGCCATTACG
ACAATGAGCCCTTCATTATTATCAAGCAAAATCAAT
back to top

Coding sequence (CDS) from alignment at KZ851927.1:234441..235826-

>M747DRAFT_284202-T1 ID=M747DRAFT_284202-T1|Name=M747DRAFT_284202-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4005bp|location=Sequence derived from alignment at KZ851927.1:234441..235826- (Aspergillus niger ATCC 13496)
GTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGGAG
ATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGCTAAG
GATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCTCTGG
GGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGT
CCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACT
GAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGA
GGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTC
GACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGACCTGC
TCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATCACC
TCCATCGTTCCCGACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCC
TCTAGAAATCCGCAAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGTG
ACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTC
GATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCT
TGAGGTCGCCGCCAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACG
AGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCT
GGCGTTATCCTATTGAAGAAGGATGGCGGACGCTCAATTCGATAGTGCGC
TGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGGA
GATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGCTAA
GGATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCTCTG
GGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATG
TCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAAC
TGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGG
AGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGT
CGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGACCTG
CTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATCAC
CTCCATCGTTCCCGACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGC
CTCTAGAAATCCGCAAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGT
GACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATT
CGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGC
TTGAGGTCGCCGCCAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTAC
GAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGC
TGGCGTTATCCTATTGAAGAAGGATGGCGGACGCTCAATTCGATAGTGCG
CTGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGG
AGATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGCTA
AGGATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCTCT
GGGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCAT
GTCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAA
CTGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTG
GAGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGG
TCGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGACCT
GCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATCA
CCTCCATCGTTCCCGACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAG
CCTCTAGAAATCCGCAAGTGCCCCAAGACAGACCGCGACTACCTCCTCTG
TGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAAT
TCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAG
CTTGAGGTCGCCGCCAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTA
CGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCG
CTGGCGTTATCCTATTGAAGAAGGATGGCGGACGCTCAATTCGATAGTGC
GCTGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTG
GAGATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGCT
AAGGATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCTC
TGGGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCA
TGTCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAA
ACTGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGT
GGAGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTG
GTCGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGACC
TGCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATC
ACCTCCATCGTTCCCGACCTGACCGAAGACCTGCTCTCCTCTGTCGATCA
GCCTCTAGAAATCCGCAAGTGCCCCAAGACAGACCGCGACTACCTCCTCT
GTGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAA
TTCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAA
GCTTGAGGTCGCCGCCAACGAGGCTTTCGATGTCTACCGGGAGCTGTACT
ACGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTC
GCTGGCGTTATCCTATTGAAGAAGGATGGCGGACGCTCAATTCGATAGTG
CGCTGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCT
GGAGATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGC
TAAGGATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCT
CTGGGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGC
ATGTCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGA
AACTGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGG
TGGAGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTT
GGTCGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGAC
CTGCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAAT
CACCTCCATCGTTCCCGACCTGACCGAAGACCTGCTCTCCTCTGTCGATC
AGCCTCTAGAAATCCGCAAGTGCCCCAAGACAGACCGCGACTACCTCCTC
TGTGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGA
ATTCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAA
AGCTTGAGGTCGCCGCCAACGAGGCTTTCGATGTCTACCGGGAGCTGTAC
TACGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATT
CGCTGGCGTTATCCTATTGAAGAAGGATGGCGGACGCTCAATTCGATAGT
GCGCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0008290F-actin capping protein complex
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: Biological Process
TermDefinition
GO:0030036actin cytoskeleton organization
GO:0051016barbed-end actin filament capping
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAP2M747DRAFT_284202Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284202-T1M747DRAFT_284202-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284202-T1.cdsM747DRAFT_284202-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284202-T1.utr3p1M747DRAFT_284202-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284202-T1.exon5M747DRAFT_284202-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_284202-T1.exon4M747DRAFT_284202-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_284202-T1.exon3M747DRAFT_284202-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_284202-T1.exon2M747DRAFT_284202-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_284202-T1.exon1M747DRAFT_284202-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_284202-T1.utr5p1M747DRAFT_284202-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR037282
DBxrefInterPro:IPR019771
DBxrefInterPro:IPR042276
DBxrefInterPro:IPR001698
DBxrefPFAM:PF01115
ProductF-actin-capping protein subunit beta
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851927.1supercontigKZ851927.1:234441..235826 -
Powered by Drupal