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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851935.1:140425..141928- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_298436-T1 ID=M747DRAFT_298436-T1|Name=M747DRAFT_298436-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1504bp|location=Sequence derived from alignment at KZ851935.1:140425..141928- (Aspergillus niger ATCC 13496)
CCTCTCTCCCCTCCAGTCTAGACAGCTTCCTGCTCCGCGTTCTCCGGGCT
TGATCGGTTTATTTGCCCGATTCTCGCTCTTCTTTGACCTTTACACTTAA
TTTCTTCCATTTTCAAGTTTCGCGCCGCGGTGTGCTAAACCCCCTTAGCC
ATGGACGAGGACTACTCTGCAGGCTCCGTGGACGCCGACCGCGAGATGAC
CAGGCTCTGGCGCACATGGCGGACAGTCTTTGAGATGCTTTTGGATCGTG
TAAGAATTTTCTCCAGTTCCAGCTCCAGCGACGCTACAATAGCCACCCCG
CGAACATTCCACTGACCGAATCCCCAAATCCACAGGGCTACGAGGTGACC
GAAGATGAAGTCCAAATGCCTCTCCACGAGTTCAAGCAGAAATATTCCGA
CCCTCTAGGATACCCCGAGTATGCGCGCCTTCTATCCCATCCAATTCCCC
CCAGTCAACTCCCATCTAACCCAAAATCCCATCACACAGCCGCAACAAGA
TGAAAATCAGCGCCCGGCCCACGGAAGCCATGCAAGCGAAATACACCCCC
CTGCCCAGCAAATCCAACCCGAACCCCCAGCCCGACTGCGGTACCATCTA
CGTTGAATTCTGCCCGGACTCGACCGGCGTCGGCACCAAGCAAGTGCGTA
CCTTCAACCACTTCGTCGACGAGAACAACTTCCACACCGGCGTGTTCATC
ACCCAGACTCCGATCTCGCCATCCGCTGTGCGCCTGCTGAGCAGCATGCC
CGGCCGCATCTGCGAGCATTTCCAGGAGCAGGATCTGCTGGTCAACATCA
CCCGCCACGAACTGGTCCCGAAACACGTCCTGCTTAGCCCCGATGAGAAG
GCTCGTTTGTTGGAACGCTACCGTCTGAAGGAGTCGCAGTTGCCTCGTAT
ACAGGTGTCTGATCCTGTTGCCAGATACCTGGGTCTGCGCAGAGGTCAGG
TCGTGAAGATTATTCGGAGAAGTGAGACGGCTGGTCGGTATGCCAGTTAT
CGGTGGGTTATATAATCGCTGGATTGTTTTTTTGGGGGGTCCTGGGATGA
GAGAACTGAGTTGTCTCCGATTATGGCGATATGCTTATTGCTGAGCCGGA
GGTACAATCCTCATCTCCCTTCCCGACGCAGGTCCAGCAAAACGATCCAA
TGTGCCCTTCGGAAGAGTCTATCAAAGACACAGAAAACAAAGAACAGGAA
CAAGAAAAGAGAGGCTGGGTTGGAAGGAAACGGAGGGAGGAAAAGAAAGA
AAAGAAAAAGAAAAATTTACCGAATACAGGCATCGGGCAGCATGGCGTAA
CGGCGAAAAATCTTCTCGAAAGTGTGTTTCTTAACGGGTGGTGTATGTGT
GTATGTCTATGCTATGTCTCTTTTTATCTTCCGTTTTGACATTAAGGTGT
GCTTCGGTTTCACCTCTATTCTCCAACTACAAGTATATCTATCTATCTAC
ACAATTCATACAATGGCTGTACAAGATTAAATCGGATGTTATTAAGTTAA
GACT back to topCoding sequence (CDS) from alignment at KZ851935.1:140425..141928- >M747DRAFT_298436-T1 ID=M747DRAFT_298436-T1|Name=M747DRAFT_298436-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2124bp|location=Sequence derived from alignment at KZ851935.1:140425..141928- (Aspergillus niger ATCC 13496)
CCGCAACAAGATGAAAATCAGCGCCCGGCCCACGGAAGCCATGCAAGCGA
AATACACCCCCCTGCCCAGCAAATCCAACCCGAACCCCCAGCCCGACTGC
GGTACCATCTACGTTGAATTCTGCCCGGACTCGACCGGCGTCGGCACCAA
GCAAGTGCGTACCTTCAACCACTTCGTCGACGAGAACAACTTCCACACCG
GCGTGTTCATCACCCAGACTCCGATCTCGCCATCCGCTGTGCGCCTGCTG
AGCAGCATGCCCGGCCGCATCTGCGAGCATTTCCAGGAGCAGGATCTGCT
GGTCAACATCACCCGCCACGAACTGGTCCCGAAACACGTCCTGCTTAGCC
CCGATGAGAAGGCTCGTTTGTTGGAACGCTACCGTCTGAAGGAGTCGCAG
TTGCCTCGTATACAGGTGTCTGATCCTGTTGCCAGATACCTGGGTCTGCG
CAGAGGTCAGGTCGTGAAGATTATTCGGAGAAGTGAGACGGCTGGTCGGT
ATGCCAGTTATCGGTGGGTTATATAAGGCTACGAGGTGACCGAAGATGAA
GTCCAAATGCCTCTCCACGAGTTCAAGCAGAAATATTCCGACCCTCTAGG
ATACCCCGAATGGACGAGGACTACTCTGCAGGCTCCGTGGACGCCGACCG
CGAGATGACCAGGCTCTGGCGCACATGGCGGACAGTCTTTGAGATGCTTT
TGGATCGTCCGCAACAAGATGAAAATCAGCGCCCGGCCCACGGAAGCCAT
GCAAGCGAAATACACCCCCCTGCCCAGCAAATCCAACCCGAACCCCCAGC
CCGACTGCGGTACCATCTACGTTGAATTCTGCCCGGACTCGACCGGCGTC
GGCACCAAGCAAGTGCGTACCTTCAACCACTTCGTCGACGAGAACAACTT
CCACACCGGCGTGTTCATCACCCAGACTCCGATCTCGCCATCCGCTGTGC
GCCTGCTGAGCAGCATGCCCGGCCGCATCTGCGAGCATTTCCAGGAGCAG
GATCTGCTGGTCAACATCACCCGCCACGAACTGGTCCCGAAACACGTCCT
GCTTAGCCCCGATGAGAAGGCTCGTTTGTTGGAACGCTACCGTCTGAAGG
AGTCGCAGTTGCCTCGTATACAGGTGTCTGATCCTGTTGCCAGATACCTG
GGTCTGCGCAGAGGTCAGGTCGTGAAGATTATTCGGAGAAGTGAGACGGC
TGGTCGGTATGCCAGTTATCGGTGGGTTATATAAGGCTACGAGGTGACCG
AAGATGAAGTCCAAATGCCTCTCCACGAGTTCAAGCAGAAATATTCCGAC
CCTCTAGGATACCCCGAATGGACGAGGACTACTCTGCAGGCTCCGTGGAC
GCCGACCGCGAGATGACCAGGCTCTGGCGCACATGGCGGACAGTCTTTGA
GATGCTTTTGGATCGTCCGCAACAAGATGAAAATCAGCGCCCGGCCCACG
GAAGCCATGCAAGCGAAATACACCCCCCTGCCCAGCAAATCCAACCCGAA
CCCCCAGCCCGACTGCGGTACCATCTACGTTGAATTCTGCCCGGACTCGA
CCGGCGTCGGCACCAAGCAAGTGCGTACCTTCAACCACTTCGTCGACGAG
AACAACTTCCACACCGGCGTGTTCATCACCCAGACTCCGATCTCGCCATC
CGCTGTGCGCCTGCTGAGCAGCATGCCCGGCCGCATCTGCGAGCATTTCC
AGGAGCAGGATCTGCTGGTCAACATCACCCGCCACGAACTGGTCCCGAAA
CACGTCCTGCTTAGCCCCGATGAGAAGGCTCGTTTGTTGGAACGCTACCG
TCTGAAGGAGTCGCAGTTGCCTCGTATACAGGTGTCTGATCCTGTTGCCA
GATACCTGGGTCTGCGCAGAGGTCAGGTCGTGAAGATTATTCGGAGAAGT
GAGACGGCTGGTCGGTATGCCAGTTATCGGTGGGTTATATAAGGCTACGA
GGTGACCGAAGATGAAGTCCAAATGCCTCTCCACGAGTTCAAGCAGAAAT
ATTCCGACCCTCTAGGATACCCCGAATGGACGAGGACTACTCTGCAGGCT
CCGTGGACGCCGACCGCGAGATGACCAGGCTCTGGCGCACATGGCGGACA
GTCTTTGAGATGCTTTTGGATCGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264904 |
| DBxref | InterPro:IPR020609 |
| DBxref | InterPro:IPR020608 |
| DBxref | InterPro:IPR000783 |
| DBxref | InterPro:IPR014381 |
| DBxref | InterPro:IPR036710 |
| DBxref | InterPro:IPR005571 |
| DBxref | InterPro:IPR035913 |
| DBxref | PFAM:PF03871 |
| DBxref | PFAM:PF01191 |
| Product | and III subunit RPABC1 |
| Product | II |
| Product | DNA-directed RNA polymerases I |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851935.1 | supercontig | KZ851935.1:140425..141928 - |
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