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M747DRAFT_287267-T1, M747DRAFT_287267-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_287267-T1
Unique NameM747DRAFT_287267-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851941.1:226845..228452+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_287267-T1 ID=M747DRAFT_287267-T1|Name=M747DRAFT_287267-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1608bp|location=Sequence derived from alignment at KZ851941.1:226845..228452+ (Aspergillus niger ATCC 13496)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTTTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGTGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATTCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGGTGAGCTACAGACCACTCTAGCGACTGTCAAGTCACATACAC
TAACAATATTGATTTAGATAACCTTGGTGCCATCCTGGCCGTCGCAGATG
TCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACA
ATGCAGCAGGTTCTGGAGGCCCTGATCAAGGCGTATGAGATTCAGGGCTG
CTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTGGACCACACCATCC
TGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCC
CGCGAGCAAGCCCTTAGTGCCGTATCTCACGCCTGGATGGACGGCCACCC
ACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGCTGGG
CAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAG
GCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTT
CTACGATGTACTGTTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTG
GCACCTGGGTCATTGAAACGGTGCTGTTTAAGGTGAACACGGCCGAGGGC
CATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCG
GGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGA
CCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGCGCAACTTTGCAT
AACGCCGCAGATCGTGACCACTGCCTGCGGTACATGGTCGCTGTGGTGCT
GCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGTCCCT
GGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCA
GAAGACCCCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGT
GGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAG
TGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAG
GAGGTTTACGCAAAATCAGAGCGGAATCTGGGTCTTCGACTGTCGACAGA
TAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGC
TACCAGCATGCCATTTTGTGAACCTTTTCAGTTTGTAACCGAGGAATGGA
AGGAGATTATTCTATATTGGAGACTTCTGATGAATATGTGGTTTATGTTT
ATGTCTAA
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Coding sequence (CDS) from alignment at KZ851941.1:226845..228452+

>M747DRAFT_287267-T1 ID=M747DRAFT_287267-T1|Name=M747DRAFT_287267-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4356bp|location=Sequence derived from alignment at KZ851941.1:226845..228452+ (Aspergillus niger ATCC 13496)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTTTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGTGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATTCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGATAACCTTGGTGCCATCCTGGCCGTCGCAGATGTCCGCAGCC
GTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAG
GTTCTGGAGGCCCTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAGAT
CAAGAATGCCTTCAACAAAGTCGGGTTGGACCACACCATCCTGGTCAAGA
TTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCCCGCGAGCAA
GCCCTTAGTGCCGTATCTCACGCCTGGATGGACGGCCACCCACTGCGCGT
GTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGCTGGGCAGCGGGTG
ATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAA
CCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGATGT
ACTGTTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTGGCACCTGGG
TCATTGAAACGGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATG
ACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGTGG
ACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGACCCAGGCTG
CTGGTATGACGATCATCAACAAGGGCGGCGCAACTTTGCATAACGCCGCA
GATCGTGACCACTGCCTGCGGTACATGGTCGCTGTGGTGCTGCTGAAGGG
AGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGTCCCTGGGCGACGG
ACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAAGACCCC
AAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAATTC
GCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAGTGTTGGTAG
AATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAGGTTTAC
GCAAAATCAGAGCGGAATCTGGGTCTTCGACTGTCGACAGATAGAGTCCA
GCAGATCCTGAAGACGACTTCTGATGAATATGTGGTTTATGTTTATGTCT
AAATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGAT
GCTGTGATCCAGGCCATCGTCGACTATGTTTACGACTACCAGATCGCCAC
CGATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAG
CTGCCCTCGAGAGTATCCATACCAGTCCCCAATGTGCACAGCTCGTTGGA
CCGGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGG
AACAGCCTACCAGCTGGATATTCTCAAGGGAGCCTTTGATCTGGGGGCCA
TGATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGG
CATCCCTCGGATAACCTTGGTGCCATCCTGGCCGTCGCAGATGTCCGCAG
CCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGC
AGGTTCTGGAGGCCCTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAG
ATCAAGAATGCCTTCAACAAAGTCGGGTTGGACCACACCATCCTGGTCAA
GATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCCCGCGAGC
AAGCCCTTAGTGCCGTATCTCACGCCTGGATGGACGGCCACCCACTGCGC
GTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGCTGGGCAGCGGG
TGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGAC
AACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGAT
GTACTGTTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTGGCACCTG
GGTCATTGAAACGGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAA
TGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGT
GGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGACCCAGGC
TGCTGGTATGACGATCATCAACAAGGGCGGCGCAACTTTGCATAACGCCG
CAGATCGTGACCACTGCCTGCGGTACATGGTCGCTGTGGTGCTGCTGAAG
GGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGTCCCTGGGCGAC
GGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAAGACC
CCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAAT
TCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAGTGTTGGT
AGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAGGTTT
ACGCAAAATCAGAGCGGAATCTGGGTCTTCGACTGTCGACAGATAGAGTC
CAGCAGATCCTGAAGACGACTTCTGATGAATATGTGGTTTATGTTTATGT
CTAAATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACG
ATGCTGTGATCCAGGCCATCGTCGACTATGTTTACGACTACCAGATCGCC
ACCGATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGG
AGCTGCCCTCGAGAGTATCCATACCAGTCCCCAATGTGCACAGCTCGTTG
GACCGGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCG
GGAACAGCCTACCAGCTGGATATTCTCAAGGGAGCCTTTGATCTGGGGGC
CATGATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGG
GGCATCCCTCGGATAACCTTGGTGCCATCCTGGCCGTCGCAGATGTCCGC
AGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCA
GCAGGTTCTGGAGGCCCTGATCAAGGCGTATGAGATTCAGGGCTGCTTCC
AGATCAAGAATGCCTTCAACAAAGTCGGGTTGGACCACACCATCCTGGTC
AAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCCCGCGA
GCAAGCCCTTAGTGCCGTATCTCACGCCTGGATGGACGGCCACCCACTGC
GCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGCTGGGCAGCG
GGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGG
ACAACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACG
ATGTACTGTTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTGGCACC
TGGGTCATTGAAACGGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGG
AATGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGC
GTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGACCCAG
GCTGCTGGTATGACGATCATCAACAAGGGCGGCGCAACTTTGCATAACGC
CGCAGATCGTGACCACTGCCTGCGGTACATGGTCGCTGTGGTGCTGCTGA
AGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGTCCCTGGGCG
ACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAAGA
CCCCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGA
ATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAGTGTTG
GTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAGGT
TTACGCAAAATCAGAGCGGAATCTGGGTCTTCGACTGTCGACAGATAGAG
TCCAGCAGATCCTGAAGACGACTTCTGATGAATATGTGGTTTATGTTTAT
GTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:00475472-methylcitrate dehydratase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_287267M747DRAFT_287267Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287267-T1.exon1M747DRAFT_287267-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_287267-T1.exon2M747DRAFT_287267-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_287267-T1.exon3M747DRAFT_287267-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287267-T1.cdsM747DRAFT_287267-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_287267-T1M747DRAFT_287267-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519411.1
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR012705
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR042183
DBxrefPFAM:PF03972
Product2-methylcitrate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851941.1supercontigKZ851941.1:226845..228452 +
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