M747DRAFT_139082-T1, M747DRAFT_139082-T1 (mRNA) Aspergillus niger ATCC 13496

Overview


Name	M747DRAFT_139082-T1
Unique Name	M747DRAFT_139082-T1
Type	mRNA
Organism	Aspergillus niger ATCC 13496

Sequences

The following sequences are available for this feature:

mRNA from alignment at KZ851948.1:26955..29338-
coding sequence from alignment at KZ851948.1:26955..29338-

mRNA from alignment at KZ851948.1:26955..29338-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>M747DRAFT_139082-T1 ID=M747DRAFT_139082-T1|Name=M747DRAFT_139082-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2384bp|location=Sequence derived from alignment at KZ851948.1:26955..29338- (Aspergillus niger ATCC 13496)
GACCACCGAAACTTGTCTCACGAGTATCGTTATTTCTCAAAATACAATGA
AGTCTCCAGAGTCTCGCTCCACTGCCGCTGCTACTGCTAAGTTCTGACGG
GAGTCACACTTGTCTCCGCATACAAATGGACTCTCATCCTTCCCCTACCA
AACAAAAGGCCTCCAAGCAAGCCTGCGACAACTGTCGTCGGCGTAAGATC
AAGTGCTCGAGAGAGCTTCCCTGCGATAAGTGTCGACGCCTTCTTCTTTC
TTGTTCCTACAGTGATGTGCTCCGGCGCAAAGGCCCCAAGTTCCGCACCT
TATATCCACTTGCGCCCATTCATCCCCTGGTATCACGACAACAGAATACA
TACCAACAGAATTCGTCACAAAATCCGTTAAACAAGCAATGGACTGCAGA
TGGAGTGGGCTATCCGTTAAGCTCACTAATGTCGCCTTCTTTCACAGTGG
CAGACCCTCAATACTTACCCCATGACGCTCCCGAGCCGTTCTCTCAGTTT
CCTCCGCCAGAGCTAGTCTCCTCACCCGACTCAACCAATTCATTGTCAGA
CTCTAGTATGGCACTAGTGCGCCCTTATGCACGACGCCTGTCTGCTCCGG
TGCTACTTGCTCATGTGAATGTTTATCTAAAATATCTGTTCCCCATCATG
CCTGTGGTGCGGAAGGAGGAGCTTCAACAAGATTGCCACCAGCCTGAACG
GTTATCGCCCCAACGATATGCCTTTCTTGTCGCCCTATGCGCAGCCACAC
ACATCCAGCTGAAACTAGATGGCACAGCATCTGTCCCAGAACCTTCACAC
CTTCAAGCCGGGATTGACGGGCATTCCTGGATGTCCGGCGAAGAGTTGCT
GGCTGAAGCAGTACGCGCAAGGAAGGATTGCGACCCAGTAGACGGCATGA
ACATAGAAAGCCTTCTTACGTCTTTCTTCCTGTTTGCTTCGTATGGTAAC
CTGGACAAACAGGACCATGCCTGGTTCTACCTTTGTCAGGCAACATCCAT
GGTCTTCACGCTGGCACTCCACCGAGAGTCAAGTTATGTGGATCTGAGTA
CCGAAGAAGCAGAGGAACGACGCAGGGTGTTTTGGCTACTGTTTGTCACC
GAAAGGTAGGTGCATCCTATGAAAGCATTGCCCATTTTTCGACTAATGTG
AATCAGGGGCTACGCACTTCAACAATCGAAACCGGTAATGCTGCGTAATT
CAATCCGCAAGCCTCAAGTACTTTGCTCCGAAGATCCTATCTTGGCCTAC
GGTTTCATCAATCTTATTAGCATCTTTGAGAAACTGACCGTCAACCTTTA
TGACTGGGTCTCTGCGGGAGGCATGGACGGCTCGTCCGAGATGCCCCCTA
CATCTGCTATTCAGTCTAGTCTCTGCAACGCAATTTCGGTCGACGGAGTC
TCGGAGATTCAAAAGGTCGACATACTCATCACCCAGCAATGGCTACAGAC
AGTAATGTGGAAACTTTCTATGACTCGTGCTACTCAGCCTGGATCTCGCG
ATGAGGCGGTTCTTCCCTTTCATCTCCCCGTTCTTGTCGGAAAAGCCGTT
ATGAATGTTATTGGTGCTGCATCCCAGGGAGCTGTTGATGTTCACGGCAT
TGGCATGGTCAGTATCTTAGTTCCGGCGCAGCACATGCCAATACCATTTA
CTAACAACATAACAGGAACAAAAATTATTCGACCTGGGTTCCTCAGTTGC
AGACGTGGCACGATCACTCAACTCCAAAGCTGCGCACCGCCTTACTGAAG
CGGCCGTCGATCCTCGCGAACTCCTTTGGGGCATTCTTACCACCTTATCA
CGCATCCGCGGCTCTCAGTCCTACCTCTTTCCTTCATTGTTGGAGCGATG
CAAAGGCGCCCTGGACTTTACCTCCCCCACGTCGATGGGCAACTTCCTCC
CTCCATTATCCACTGCTTCCACATGGGAAGAGGAAACGGGGCTCGCCGTG
GTTTCTGTCCCGGAGAATCCTGACCCTCATGAACAAGAAGCAGCATTAAT
GGAGCCGCTATCGCAGCTCTTACCAACTCCACAGGTGCAATTCCCGGAAA
ATAATCTTTTGAACTAGGAAGGCAACTACGACGATGACGATGCTAGCATT
AATCCGCGTTTGTTACGACTTTGCTTATGTTATGATACCATTTATCCGGA
GACTATGTGGCAATGTATACGGCATGAAGGTGAACTGTATGTAATAAAGC
ATGTATATAGGTGATGAGACTATCTTATATGATTACCGATCGTGGTCGAA
TATTAGCTGAGCCACCATGCATTGCATTGGACTATTCAGCCATCACACTT
CTGTTATTCTGAAAAGGTAGCATTAATTTTTTGTGGAATCTTTCTTTATT
TCAGTCTAACTGCGCTATACAAAGCAACACAACC

Coding sequence (CDS) from alignment at KZ851948.1:26955..29338-

>M747DRAFT_139082-T1 ID=M747DRAFT_139082-T1|Name=M747DRAFT_139082-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5499bp|location=Sequence derived from alignment at KZ851948.1:26955..29338- (Aspergillus niger ATCC 13496)
GAACAAAAATTATTCGACCTGGGTTCCTCAGTTGCAGACGTGGCACGATC
ACTCAACTCCAAAGCTGCGCACCGCCTTACTGAAGCGGCCGTCGATCCTC
GCGAACTCCTTTGGGGCATTCTTACCACCTTATCACGCATCCGCGGCTCT
CAGTCCTACCTCTTTCCTTCATTGTTGGAGCGATGCAAAGGCGCCCTGGA
CTTTACCTCCCCCACGTCGATGGGCAACTTCCTCCCTCCATTATCCACTG
CTTCCACATGGGAAGAGGAAACGGGGCTCGCCGTGGTTTCTGTCCCGGAG
AATCCTGACCCTCATGAACAAGAAGCAGCATTAATGGAGCCGCTATCGCA
GCTCTTACCAACTCCACAGGTGCAATTCCCGGAAAATAATCTTTTGAACT
AGGGGCTACGCACTTCAACAATCGAAACCGGTAATGCTGCGTAATTCAAT
CCGCAAGCCTCAAGTACTTTGCTCCGAAGATCCTATCTTGGCCTACGGTT
TCATCAATCTTATTAGCATCTTTGAGAAACTGACCGTCAACCTTTATGAC
TGGGTCTCTGCGGGAGGCATGGACGGCTCGTCCGAGATGCCCCCTACATC
TGCTATTCAGTCTAGTCTCTGCAACGCAATTTCGGTCGACGGAGTCTCGG
AGATTCAAAAGGTCGACATACTCATCACCCAGCAATGGCTACAGACAGTA
ATGTGGAAACTTTCTATGACTCGTGCTACTCAGCCTGGATCTCGCGATGA
GGCGGTTCTTCCCTTTCATCTCCCCGTTCTTGTCGGAAAAGCCGTTATGA
ATGTTATTGGTGCTGCATCCCAGGGAGCTGTTGATGTTCACGGCATTGGC
ATGATGGACTCTCATCCTTCCCCTACCAAACAAAAGGCCTCCAAGCAAGC
CTGCGACAACTGTCGTCGGCGTAAGATCAAGTGCTCGAGAGAGCTTCCCT
GCGATAAGTGTCGACGCCTTCTTCTTTCTTGTTCCTACAGTGATGTGCTC
CGGCGCAAAGGCCCCAAGTTCCGCACCTTATATCCACTTGCGCCCATTCA
TCCCCTGGTATCACGACAACAGAATACATACCAACAGAATTCGTCACAAA
ATCCGTTAAACAAGCAATGGACTGCAGATGGAGTGGGCTATCCGTTAAGC
TCACTAATGTCGCCTTCTTTCACAGTGGCAGACCCTCAATACTTACCCCA
TGACGCTCCCGAGCCGTTCTCTCAGTTTCCTCCGCCAGAGCTAGTCTCCT
CACCCGACTCAACCAATTCATTGTCAGACTCTAGTATGGCACTAGTGCGC
CCTTATGCACGACGCCTGTCTGCTCCGGTGCTACTTGCTCATGTGAATGT
TTATCTAAAATATCTGTTCCCCATCATGCCTGTGGTGCGGAAGGAGGAGC
TTCAACAAGATTGCCACCAGCCTGAACGGTTATCGCCCCAACGATATGCC
TTTCTTGTCGCCCTATGCGCAGCCACACACATCCAGCTGAAACTAGATGG
CACAGCATCTGTCCCAGAACCTTCACACCTTCAAGCCGGGATTGACGGGC
ATTCCTGGATGTCCGGCGAAGAGTTGCTGGCTGAAGCAGTACGCGCAAGG
AAGGATTGCGACCCAGTAGACGGCATGAACATAGAAAGCCTTCTTACGTC
TTTCTTCCTGTTTGCTTCGTATGGTAACCTGGACAAACAGGACCATGCCT
GGTTCTACCTTTGTCAGGCAACATCCATGGTCTTCACGCTGGCACTCCAC
CGAGAGTCAAGTTATGTGGATCTGAGTACCGAAGAAGCAGAGGAACGACG
CAGGGTGTTTTGGCTACTGTTTGTCACCGAAAGGAACAAAAATTATTCGA
CCTGGGTTCCTCAGTTGCAGACGTGGCACGATCACTCAACTCCAAAGCTG
CGCACCGCCTTACTGAAGCGGCCGTCGATCCTCGCGAACTCCTTTGGGGC
ATTCTTACCACCTTATCACGCATCCGCGGCTCTCAGTCCTACCTCTTTCC
TTCATTGTTGGAGCGATGCAAAGGCGCCCTGGACTTTACCTCCCCCACGT
CGATGGGCAACTTCCTCCCTCCATTATCCACTGCTTCCACATGGGAAGAG
GAAACGGGGCTCGCCGTGGTTTCTGTCCCGGAGAATCCTGACCCTCATGA
ACAAGAAGCAGCATTAATGGAGCCGCTATCGCAGCTCTTACCAACTCCAC
AGGTGCAATTCCCGGAAAATAATCTTTTGAACTAGGGGCTACGCACTTCA
ACAATCGAAACCGGTAATGCTGCGTAATTCAATCCGCAAGCCTCAAGTAC
TTTGCTCCGAAGATCCTATCTTGGCCTACGGTTTCATCAATCTTATTAGC
ATCTTTGAGAAACTGACCGTCAACCTTTATGACTGGGTCTCTGCGGGAGG
CATGGACGGCTCGTCCGAGATGCCCCCTACATCTGCTATTCAGTCTAGTC
TCTGCAACGCAATTTCGGTCGACGGAGTCTCGGAGATTCAAAAGGTCGAC
ATACTCATCACCCAGCAATGGCTACAGACAGTAATGTGGAAACTTTCTAT
GACTCGTGCTACTCAGCCTGGATCTCGCGATGAGGCGGTTCTTCCCTTTC
ATCTCCCCGTTCTTGTCGGAAAAGCCGTTATGAATGTTATTGGTGCTGCA
TCCCAGGGAGCTGTTGATGTTCACGGCATTGGCATGATGGACTCTCATCC
TTCCCCTACCAAACAAAAGGCCTCCAAGCAAGCCTGCGACAACTGTCGTC
GGCGTAAGATCAAGTGCTCGAGAGAGCTTCCCTGCGATAAGTGTCGACGC
CTTCTTCTTTCTTGTTCCTACAGTGATGTGCTCCGGCGCAAAGGCCCCAA
GTTCCGCACCTTATATCCACTTGCGCCCATTCATCCCCTGGTATCACGAC
AACAGAATACATACCAACAGAATTCGTCACAAAATCCGTTAAACAAGCAA
TGGACTGCAGATGGAGTGGGCTATCCGTTAAGCTCACTAATGTCGCCTTC
TTTCACAGTGGCAGACCCTCAATACTTACCCCATGACGCTCCCGAGCCGT
TCTCTCAGTTTCCTCCGCCAGAGCTAGTCTCCTCACCCGACTCAACCAAT
TCATTGTCAGACTCTAGTATGGCACTAGTGCGCCCTTATGCACGACGCCT
GTCTGCTCCGGTGCTACTTGCTCATGTGAATGTTTATCTAAAATATCTGT
TCCCCATCATGCCTGTGGTGCGGAAGGAGGAGCTTCAACAAGATTGCCAC
CAGCCTGAACGGTTATCGCCCCAACGATATGCCTTTCTTGTCGCCCTATG
CGCAGCCACACACATCCAGCTGAAACTAGATGGCACAGCATCTGTCCCAG
AACCTTCACACCTTCAAGCCGGGATTGACGGGCATTCCTGGATGTCCGGC
GAAGAGTTGCTGGCTGAAGCAGTACGCGCAAGGAAGGATTGCGACCCAGT
AGACGGCATGAACATAGAAAGCCTTCTTACGTCTTTCTTCCTGTTTGCTT
CGTATGGTAACCTGGACAAACAGGACCATGCCTGGTTCTACCTTTGTCAG
GCAACATCCATGGTCTTCACGCTGGCACTCCACCGAGAGTCAAGTTATGT
GGATCTGAGTACCGAAGAAGCAGAGGAACGACGCAGGGTGTTTTGGCTAC
TGTTTGTCACCGAAAGGAACAAAAATTATTCGACCTGGGTTCCTCAGTTG
CAGACGTGGCACGATCACTCAACTCCAAAGCTGCGCACCGCCTTACTGAA
GCGGCCGTCGATCCTCGCGAACTCCTTTGGGGCATTCTTACCACCTTATC
ACGCATCCGCGGCTCTCAGTCCTACCTCTTTCCTTCATTGTTGGAGCGAT
GCAAAGGCGCCCTGGACTTTACCTCCCCCACGTCGATGGGCAACTTCCTC
CCTCCATTATCCACTGCTTCCACATGGGAAGAGGAAACGGGGCTCGCCGT
GGTTTCTGTCCCGGAGAATCCTGACCCTCATGAACAAGAAGCAGCATTAA
TGGAGCCGCTATCGCAGCTCTTACCAACTCCACAGGTGCAATTCCCGGAA
AATAATCTTTTGAACTAGGGGCTACGCACTTCAACAATCGAAACCGGTAA
TGCTGCGTAATTCAATCCGCAAGCCTCAAGTACTTTGCTCCGAAGATCCT
ATCTTGGCCTACGGTTTCATCAATCTTATTAGCATCTTTGAGAAACTGAC
CGTCAACCTTTATGACTGGGTCTCTGCGGGAGGCATGGACGGCTCGTCCG
AGATGCCCCCTACATCTGCTATTCAGTCTAGTCTCTGCAACGCAATTTCG
GTCGACGGAGTCTCGGAGATTCAAAAGGTCGACATACTCATCACCCAGCA
ATGGCTACAGACAGTAATGTGGAAACTTTCTATGACTCGTGCTACTCAGC
CTGGATCTCGCGATGAGGCGGTTCTTCCCTTTCATCTCCCCGTTCTTGTC
GGAAAAGCCGTTATGAATGTTATTGGTGCTGCATCCCAGGGAGCTGTTGA
TGTTCACGGCATTGGCATGATGGACTCTCATCCTTCCCCTACCAAACAAA
AGGCCTCCAAGCAAGCCTGCGACAACTGTCGTCGGCGTAAGATCAAGTGC
TCGAGAGAGCTTCCCTGCGATAAGTGTCGACGCCTTCTTCTTTCTTGTTC
CTACAGTGATGTGCTCCGGCGCAAAGGCCCCAAGTTCCGCACCTTATATC
CACTTGCGCCCATTCATCCCCTGGTATCACGACAACAGAATACATACCAA
CAGAATTCGTCACAAAATCCGTTAAACAAGCAATGGACTGCAGATGGAGT
GGGCTATCCGTTAAGCTCACTAATGTCGCCTTCTTTCACAGTGGCAGACC
CTCAATACTTACCCCATGACGCTCCCGAGCCGTTCTCTCAGTTTCCTCCG
CCAGAGCTAGTCTCCTCACCCGACTCAACCAATTCATTGTCAGACTCTAG
TATGGCACTAGTGCGCCCTTATGCACGACGCCTGTCTGCTCCGGTGCTAC
TTGCTCATGTGAATGTTTATCTAAAATATCTGTTCCCCATCATGCCTGTG
GTGCGGAAGGAGGAGCTTCAACAAGATTGCCACCAGCCTGAACGGTTATC
GCCCCAACGATATGCCTTTCTTGTCGCCCTATGCGCAGCCACACACATCC
AGCTGAAACTAGATGGCACAGCATCTGTCCCAGAACCTTCACACCTTCAA
GCCGGGATTGACGGGCATTCCTGGATGTCCGGCGAAGAGTTGCTGGCTGA
AGCAGTACGCGCAAGGAAGGATTGCGACCCAGTAGACGGCATGAACATAG
AAAGCCTTCTTACGTCTTTCTTCCTGTTTGCTTCGTATGGTAACCTGGAC
AAACAGGACCATGCCTGGTTCTACCTTTGTCAGGCAACATCCATGGTCTT
CACGCTGGCACTCCACCGAGAGTCAAGTTATGTGGATCTGAGTACCGAAG
AAGCAGAGGAACGACGCAGGGTGTTTTGGCTACTGTTTGTCACCGAAAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0008270	zinc ion binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
M747DRAFT_139082	M747DRAFT_139082	Aspergillus niger ATCC 13496	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_139082-T1	M747DRAFT_139082-T1-protein	Aspergillus niger ATCC 13496	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_139082-T1.cds	M747DRAFT_139082-T1.cds	Aspergillus niger ATCC 13496	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_139082-T1.utr3p1	M747DRAFT_139082-T1.utr3p1	Aspergillus niger ATCC 13496	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_139082-T1.exon3	M747DRAFT_139082-T1.exon3	Aspergillus niger ATCC 13496	exon
M747DRAFT_139082-T1.exon2	M747DRAFT_139082-T1.exon2	Aspergillus niger ATCC 13496	exon
M747DRAFT_139082-T1.exon1	M747DRAFT_139082-T1.exon1	Aspergillus niger ATCC 13496	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
M747DRAFT_139082-T1.utr5p1	M747DRAFT_139082-T1.utr5p1	Aspergillus niger ATCC 13496	five_prime_UTR

Properties


Property Name	Value
Note	EggNog:ENOG41
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR007219
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
DBxref	PFAM:PF04082
Product	amylase cluster transcriptional regulator AmyR

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger ATCC 13496 whole genome analysis	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KZ851948.1	supercontig	KZ851948.1:26955..29338 -

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M747DRAFT_139082-T1, M747DRAFT_139082-T1 (mRNA) Aspergillus niger ATCC 13496

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M747DRAFT_139082-T1, M747DRAFT_139082-T1 (mRNA) Aspergillus niger ATCC 13496