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M747DRAFT_247285-T1, M747DRAFT_247285-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_247285-T1
Unique NameM747DRAFT_247285-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851949.1:180181..181270+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_247285-T1 ID=M747DRAFT_247285-T1|Name=M747DRAFT_247285-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1090bp|location=Sequence derived from alignment at KZ851949.1:180181..181270+ (Aspergillus niger ATCC 13496)
ATGCATACTCCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGC
CGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTG
CTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACATATTCCACCATC
GGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTA
CGTTGCCAGCGGCACGTATGAGGAGCAGCTGACCATTGACTACGCTGGCA
ACCTCACCTTGTACGGTGAGACTACCGACACCAGCACATACAAGGACAAT
GTGGTGACCATTACCCACACCATCTCGTCGTCGGATGCCGGCTCTCTCGA
CAAGAGCGCCACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACA
TCAACGTGGAGAATGGATATGGTGAGGGAGCACAGGCTGTAGCGTAAGTA
TGCCGATCTTCCCGATTCATTGAGATTGTTGGGCTAATGGCTTTGCTAGC
CTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGG
TTATCAAGACACTCTCTATGTCAAGGCCGGTACCCAGTATTACTCCAACT
GCATGATCGAGGGTCAGTATTTGTCCAAGCAGCACCATTAGCAAATTGAC
TAACTATTCCAGGCGCGGTCGACTACATCTTCGGCGATGCGTCCGTGTGG
TTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTC
ATCGCGCGAAACCTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCA
ACATCAAGGCTGCTTCGGGAGTCTCTCTCACGGAGGAAGTCTACCTGGGC
CGGCCGTGGCGCGTGCTGGCGCGAGTCATCTACCAGAACTCAGTGTTGTC
GGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGC
CGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACATCTGAT
CGCGAATACGAGACCTCCATTTCTGCTGCGGTTGACAAGACCACAGTGCT
GGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAA
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Coding sequence (CDS) from alignment at KZ851949.1:180181..181270+

>M747DRAFT_247285-T1 ID=M747DRAFT_247285-T1|Name=M747DRAFT_247285-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2952bp|location=Sequence derived from alignment at KZ851949.1:180181..181270+ (Aspergillus niger ATCC 13496)
ATGCATACTCCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGC
CGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTG
CTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACATATTCCACCATC
GGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTA
CGTTGCCAGCGGCACGTATGAGGAGCAGCTGACCATTGACTACGCTGGCA
ACCTCACCTTGTACGGTGAGACTACCGACACCAGCACATACAAGGACAAT
GTGGTGACCATTACCCACACCATCTCGTCGTCGGATGCCGGCTCTCTCGA
CAAGAGCGCCACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACA
TCAACGTGGAGAATGGATATGGTGAGGGAGCACAGGCTGTAGCCCTTGTC
GGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGGTTATCA
AGACACTCTCTATGTCAAGGCCGGTACCCAGTATTACTCCAACTGCATGA
TCGAGGGCGCGGTCGACTACATCTTCGGCGATGCGTCCGTGTGGTTCGGC
GAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTCATCGCG
CGAAACCTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCAACATCA
AGGCTGCTTCGGGAGTCTCTCTCACGGAGGAAGTCTACCTGGGCCGGCCG
TGGCGCGTGCTGGCGCGAGTCATCTACCAGAACTCAGTGTTGTCGGACAT
CATCAACCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGCCGCTGT
ATTATGAATACAACAACTCTGGTGCGGGATCGGACACATCTGATCGCGAA
TACGAGACCTCCATTTCTGCTGCGGTTGACAAGACCACAGTGCTGGGCGA
GACTTGGGGAGACTGGATTGATCGGAGCTACTAAATGCATACTCCATATC
TTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGCTCCGGCA
GAGCACATCAAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAGGGTGTCT
GACGGTCGGATCGGATGGAACATATTCCACCATCGGCGACGCGCTTGACG
CTCTAGGCTCATCCACTTCGTCCGCTTGCATTTACGTTGCCAGCGGCACG
TATGAGGAGCAGCTGACCATTGACTACGCTGGCAACCTCACCTTGTACGG
TGAGACTACCGACACCAGCACATACAAGGACAATGTGGTGACCATTACCC
ACACCATCTCGTCGTCGGATGCCGGCTCTCTCGACAAGAGCGCCACCGTC
AACGTGGTCTCGGATGGGTTCAGCATGTACAACATCAACGTGGAGAATGG
ATATGGTGAGGGAGCACAGGCTGTAGCCCTTGTCGGAAACGCAGATCAAC
TGGGCTTCTATGGATGCCAATTCAGTGGTTATCAAGACACTCTCTATGTC
AAGGCCGGTACCCAGTATTACTCCAACTGCATGATCGAGGGCGCGGTCGA
CTACATCTTCGGCGATGCGTCCGTGTGGTTCGGCGAATGTGACATTGTGT
CTAACGGCGCCGGTGCCATCACGGCCTCATCGCGCGAAACCTCCTCTGAC
TCAGGCTGGTACGCTATCGACAACTGCAACATCAAGGCTGCTTCGGGAGT
CTCTCTCACGGAGGAAGTCTACCTGGGCCGGCCGTGGCGCGTGCTGGCGC
GAGTCATCTACCAGAACTCAGTGTTGTCGGACATCATCAACCCCAAGGGA
TGGACGACCATGGCAGACGGTGCGACGCCGCTGTATTATGAATACAACAA
CTCTGGTGCGGGATCGGACACATCTGATCGCGAATACGAGACCTCCATTT
CTGCTGCGGTTGACAAGACCACAGTGCTGGGCGAGACTTGGGGAGACTGG
ATTGATCGGAGCTACTAAATGCATACTCCATATCTTCTGGGCGCCCTTGC
CGCCCTGGCTGCTACCGCCGTCGGTGCTCCGGCAGAGCACATCAAGAAGC
GAGAGAGCCGGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGGATCGGAT
GGAACATATTCCACCATCGGCGACGCGCTTGACGCTCTAGGCTCATCCAC
TTCGTCCGCTTGCATTTACGTTGCCAGCGGCACGTATGAGGAGCAGCTGA
CCATTGACTACGCTGGCAACCTCACCTTGTACGGTGAGACTACCGACACC
AGCACATACAAGGACAATGTGGTGACCATTACCCACACCATCTCGTCGTC
GGATGCCGGCTCTCTCGACAAGAGCGCCACCGTCAACGTGGTCTCGGATG
GGTTCAGCATGTACAACATCAACGTGGAGAATGGATATGGTGAGGGAGCA
CAGGCTGTAGCCCTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGATG
CCAATTCAGTGGTTATCAAGACACTCTCTATGTCAAGGCCGGTACCCAGT
ATTACTCCAACTGCATGATCGAGGGCGCGGTCGACTACATCTTCGGCGAT
GCGTCCGTGTGGTTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGC
CATCACGGCCTCATCGCGCGAAACCTCCTCTGACTCAGGCTGGTACGCTA
TCGACAACTGCAACATCAAGGCTGCTTCGGGAGTCTCTCTCACGGAGGAA
GTCTACCTGGGCCGGCCGTGGCGCGTGCTGGCGCGAGTCATCTACCAGAA
CTCAGTGTTGTCGGACATCATCAACCCCAAGGGATGGACGACCATGGCAG
ACGGTGCGACGCCGCTGTATTATGAATACAACAACTCTGGTGCGGGATCG
GACACATCTGATCGCGAATACGAGACCTCCATTTCTGCTGCGGTTGACAA
GACCACAGTGCTGGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_247285M747DRAFT_247285Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_247285-T1.exon1M747DRAFT_247285-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_247285-T1.exon2M747DRAFT_247285-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_247285-T1.exon3M747DRAFT_247285-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_247285-T1.cdsM747DRAFT_247285-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_247285-T1M747DRAFT_247285-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:CE8
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR033131
DBxrefInterPro:IPR000070
DBxrefInterPro:IPR012334
DBxrefPFAM:PF01095
Productpectin lyase-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851949.1supercontigKZ851949.1:180181..181270 +
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