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M747DRAFT_374635-T1, M747DRAFT_374635-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_374635-T1
Unique NameM747DRAFT_374635-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851954.1:152476..153601-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_374635-T1 ID=M747DRAFT_374635-T1|Name=M747DRAFT_374635-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1126bp|location=Sequence derived from alignment at KZ851954.1:152476..153601- (Aspergillus niger ATCC 13496)
GATCAATATGTGTTCAAAACGAAAATCAGTATTTTCGCTACCCTCTGATA
GCGAAAAAAAGAAAGCAAAGGTAAACATAAATGCTCGTTTATCTCGGCTT
ACACTGACATCTTGGAAGTACAATGATGACTTGCAGCTTGCGAAAGATTC
AATCCCCTCCACCCACAGCCCGCAAAGCAAAGAGAATAATTTCGTCCTTC
TGAGAACATTGCTTCAGGATATTATACAGAGCCACGGCGATACTCAAAGC
CACGGATCCCAGACCGACACCGATATCTTTACTGCAGCTACTGAGCTCGA
CGCTGCATTACAGCGTGCAGCAGGTACCATAAAATCTACTACCAAACCCT
ATGAGGGTGCAACACTAGCGCTAGAGACATCGGAAGCCAATGTGGAGTGT
TCTTTGCCCCCTTTACCTCCAATATTGGATGACATGCTTGAGAGGGCAGT
TTTCACACACCCGGGTGTCAGCAACAACTCCGGAGCTACTTACGATCGGC
TCGAGGTTCTTGGAGATGCATATATTGAACTTATCTCCACGAAGCTCATC
TGGGACAGATTCCAGGATATTCCTTCGGGTCAAATATCTCAAATACGCGA
GAGACTTGTAAAGAATGAGACACTGTCTGATTATGCGTCTAAGTACGGAC
TCGACAGCAGGGCTTCCGTACCTCCGGACTATCGGAAGCAACCCAAAAGA
TGGCTTAAAACCAAGGCAGACATCTTTGAGGCTTATGTAGCTGCCGTTGT
CCTGTCAGATACCAGCAATGGTTATTGTGTGGCTGAAGAATGGCTAAGAC
AATTGTGGTCTCCGAAGCTTGAAAAGCTTGAAAAACCAAAATCCGCCTTG
CATGCCAAAGAAGCACTCGCAAAGAAAATCATGGGCAAGGGGATTAAGCT
TAATTACATCGATGAGCGCCCTCCTGCTCAGCGCGGCAGGGGGCTACAGA
CATATTTTATCGGAGTTTATCTCACTGGCTGGGGCTGGAACCATAAGCAC
CTTGGCTCTGGTCAAGGTTCTAATAAAGCAATTGCAGGAAATGAGGCGGC
CGAGCAGGCATTGTTAAATGAACCTCTAATCGAAAAGATCATGGAAGTTA
AGAAAGCACATCTAGCACAAAGATAA
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Coding sequence (CDS) from alignment at KZ851954.1:152476..153601-

>M747DRAFT_374635-T1 ID=M747DRAFT_374635-T1|Name=M747DRAFT_374635-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2142bp|location=Sequence derived from alignment at KZ851954.1:152476..153601- (Aspergillus niger ATCC 13496)
TACAATGATGACTTGCAGCTTGCGAAAGATTCAATCCCCTCCACCCACAG
CCCGCAAAGCAAAGAGAATAATTTCGTCCTTCTGAGAACATTGCTTCAGG
ATATTATACAGAGCCACGGCGATACTCAAAGCCACGGATCCCAGACCGAC
ACCGATATCTTTACTGCAGCTACTGAGCTCGACGCTGCATTACAGCGTGC
AGCAGGTACCATAAAATCTACTACCAAACCCTATGAGGGTGCAACACTAG
CGCTAGAGACATCGGAAGCCAATGTGGAGTGTTCTTTGCCCCCTTTACCT
CCAATATTGGATGACATGCTTGAGAGGGCAGTTTTCACACACCCGGGTGT
CAGCAACAACTCCGGAGCTACTTACGATCGGCTCGAGGTTCTTGGAGATG
CATATATTGAACTTATCTCCACGAAGCTCATCTGGGACAGATTCCAGGAT
ATTCCTTCGGGTCAAATATCTCAAATACGCGAGAGACTTGTAAAGAATGA
GACACTGTCTGATTATGCGTCTAAGTACGGACTCGACAGCAGGGCTTCCG
TACCTCCGGACTATCGGAAGCAACCCAAAAGATGGCTTAAAACCAAGGCA
GACATCTTTGAGGCTTATGTAGCTGCCGTTGTCCTGTCAGATACCAGCAA
TGGTTATTGTGTGGCTGAAGAATGGCTAAGACAATTGTGGTCTCCGAAGC
TTGAAAAGCTTGAAAAACCAAAATCCGCCTTGCATGCCAAAGAAGCACTC
GCAAAGAAAATCATGGGCAAGGGGATTAAGCTTAATTACATCGATGAGCG
CCCTCCTGCTCAGCGCGGCAGGGGGCTACAGACATATTTTATCGGAGTTT
ATCTCACTGGCTGGGGCTGGAACCATAAGCACCTTGGCTCTGGTCAAGGT
TCTAATAAAGCAATTGCAGGAAATGAGGCGGCCGAGCAGGCATTGTTAAA
TGAACCTCTAATCGAAAAGATCATGGAAGTTAAGAAAGCACATCTAGCAC
AAAGATAAATGTGTTCAAAACGAAAATCAGTATTTTCGCTACCCTCTGAT
AGCGAAAAAAAGAAAGCAAAGTACAATGATGACTTGCAGCTTGCGAAAGA
TTCAATCCCCTCCACCCACAGCCCGCAAAGCAAAGAGAATAATTTCGTCC
TTCTGAGAACATTGCTTCAGGATATTATACAGAGCCACGGCGATACTCAA
AGCCACGGATCCCAGACCGACACCGATATCTTTACTGCAGCTACTGAGCT
CGACGCTGCATTACAGCGTGCAGCAGGTACCATAAAATCTACTACCAAAC
CCTATGAGGGTGCAACACTAGCGCTAGAGACATCGGAAGCCAATGTGGAG
TGTTCTTTGCCCCCTTTACCTCCAATATTGGATGACATGCTTGAGAGGGC
AGTTTTCACACACCCGGGTGTCAGCAACAACTCCGGAGCTACTTACGATC
GGCTCGAGGTTCTTGGAGATGCATATATTGAACTTATCTCCACGAAGCTC
ATCTGGGACAGATTCCAGGATATTCCTTCGGGTCAAATATCTCAAATACG
CGAGAGACTTGTAAAGAATGAGACACTGTCTGATTATGCGTCTAAGTACG
GACTCGACAGCAGGGCTTCCGTACCTCCGGACTATCGGAAGCAACCCAAA
AGATGGCTTAAAACCAAGGCAGACATCTTTGAGGCTTATGTAGCTGCCGT
TGTCCTGTCAGATACCAGCAATGGTTATTGTGTGGCTGAAGAATGGCTAA
GACAATTGTGGTCTCCGAAGCTTGAAAAGCTTGAAAAACCAAAATCCGCC
TTGCATGCCAAAGAAGCACTCGCAAAGAAAATCATGGGCAAGGGGATTAA
GCTTAATTACATCGATGAGCGCCCTCCTGCTCAGCGCGGCAGGGGGCTAC
AGACATATTTTATCGGAGTTTATCTCACTGGCTGGGGCTGGAACCATAAG
CACCTTGGCTCTGGTCAAGGTTCTAATAAAGCAATTGCAGGAAATGAGGC
GGCCGAGCAGGCATTGTTAAATGAACCTCTAATCGAAAAGATCATGGAAG
TTAAGAAAGCACATCTAGCACAAAGATAAATGTGTTCAAAACGAAAATCA
GTATTTTCGCTACCCTCTGATAGCGAAAAAAAGAAAGCAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_374635M747DRAFT_374635Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_374635-T1M747DRAFT_374635-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_374635-T1.cdsM747DRAFT_374635-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_374635-T1.exon2M747DRAFT_374635-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_374635-T1.exon1M747DRAFT_374635-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_374635-T1.utr5p1M747DRAFT_374635-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF14622
DBxrefPFAM:PF00636
Productribonuclease III
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851954.1supercontigKZ851954.1:152476..153601 -
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