You are here

Home

M747DRAFT_375280-T1, M747DRAFT_375280-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_375280-T1
Unique NameM747DRAFT_375280-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851989.1:19442..21414+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_375280-T1 ID=M747DRAFT_375280-T1|Name=M747DRAFT_375280-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1973bp|location=Sequence derived from alignment at KZ851989.1:19442..21414+ (Aspergillus niger ATCC 13496)
GTTCTTTGCCTTTCTTTCGATGCTTCGCACATAGTCAGAAAGTCTCTTTG
GTGACTGTGGCTGTACAACCTGCCCTATTCCCTATTGTTACGTCTTCACG
GGATACCTCCCGTACCACCTAACTAGGATGGGCGACATGTACTCGGAAGC
CGAGTTGGAGCGACTTGGTCGCATGAGGCCGACTATCTTCCCTAATTTGC
TATCGGAACTGGGATTTTGCTTTTCGCTCGTGCTCTCGCAGATTATGGCA
GTAAGTTTCAGCAGGGTTTCTTCTGTTCACCGGTATAGACATCCGTCTTG
GGGGACCTATGCGCTGACCTGCATCAGGAATACTTCATTTCCGGCTTCAA
TGTTCTCCTCCCCTCTTTAGCTGAGGGACTGGACATCCCAGAAGCCTCGT
CCAGCTGGCCATCGAGTGCCTTTGCCCTGACGGCGGGTGGTTCGTTGCTC
TTCTTCGGCCGTCTGGCGGATCGCTATGGAGGGTTTGTCGTCTTCGCAGG
AGGGTTGGCCTGGCATCTTGTCTGGTCGCTCGTTGCCGGTTTCGCCAAGA
ATGCCCTCATGATGTATTTTTGTCGGGCGTTGCAGGGTTTTGGCCCGGCT
GCTTTTCTTTCGGCTGGAATCATGCTCTTGGGCACTACCTATCGTCCGGG
ATGGCGCAAGAACTTGGTGTTCAGTATCTACGGCGCCTGCGCGCCCATCG
GATTTGTCGCCGGAATCTTTGTCTCCGGCATGACTGGACAGTTTCTCGAC
TGGCGCTGGTATTTTTGGATCGGGACGATGTTGCTCTTCCTGGCTCTCAT
CGCAGCTGTCCTCTCCGTCCCAGCCAGTATTCGCCGCAAGCCTCCGCACC
CTGACATGTCCATAGATTGGGCTGGCGCCGGTCTCTTCTTTTGCAGTCTG
GTGCTGATATTTTTCGCCATCAACGATTGCGGCCATGCACCCGACGGCTG
GCGAACACCTTACGTGTATATCACGTTGATTGTGGGCTTTTTTGTGCTGC
TAGCTGCGATCTACGTCGAAGGTTGGGTGGCCAAGGAGCCACTTCTTCCT
CTTAGTCTCTTCCGCATCCCCCAACTATCGTCCCTACTCCTCGGACTGTT
CTGCTTCTACGGCGTGTTTGGCATCTGGCTGCTGTACTGTGTGGAGTACA
TGGAGAATATCATGCACGCCTCGCCCCTGCTCGTGGTAGCATACTTTGTC
CCCTTCGCATTAGGTGGCATCTTCTTTAGCCTGATTGGAGGCTTATTCCT
GCATGTTCTTCCCGGCACGGTTCTTCTTGTGATCTCGGGCATTGGATGGC
TGATGGCACCACTGCTATTTGCTATCATGCCGCTCGGAGCCAGCTACTGG
CCCTACGTATTTCCGGCCATGATCTGCGGCACCCTGGGCATGGATGTCAC
GTACAATGTGACCAACATCTTCGTTACTACCTCTCTTCCCGAGCGACAAC
AAGGGCTCGCCGCTGCGGTCGCCAACAGCGTTTTGTTCTTGGGCATTAGT
TTTTGGCTGGGGTGGGGTGACTTCACCTCGGCGCAGGTGAAGGGAGACTT
GCGCTCGAGATACCAGGCTCCACTCTGGATGGCGGTGGGGTTGGCCGGGC
TGGGACTGATCATCATGGTGCTCTTTGTGAAGATTAAGCCCGCCAAGAGT
GAGGTGACAGTGGATGAGAAGGAATGTAACTCAGGAGACACGGAGATGGT
GCCCAAGCAGGAGACAGACATTGCAGTGAATGGACGGGATGGGGATGTCC
TGCAATAACTGGGACAGGATTCGTTCATTCTCACTATCACCCCCGGGGTT
GATATGAAATTGTCAATCACCGCTTACGCTCTGAACGCTTCCTTTCAAAT
ACTACATTCCGGTGGAAAGGGTCTCGTATTGCGAGAAATAAACCTTTCCT
AGAGTATTCGTATAGATATTGACAACCCCCCCCCCCTTTTTTTTGGAAGG
TGTTCACTCGAGTACGGATTTGC
back to top

Coding sequence (CDS) from alignment at KZ851989.1:19442..21414+

>M747DRAFT_375280-T1 ID=M747DRAFT_375280-T1|Name=M747DRAFT_375280-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3108bp|location=Sequence derived from alignment at KZ851989.1:19442..21414+ (Aspergillus niger ATCC 13496)
ATGGGCGACATGTACTCGGAAGCCGAGTTGGAGCGACTTGGTCGCATGAG
GCCGACTATCTTCCCTAATTTGCTATCGGAACTGGGATTTTGCTTTTCGC
TCGTGCTCTCGCAGATTATGGCAGAATACTTCATTTCCGGCTTCAATGTT
CTCCTCCCCTCTTTAGCTGAGGGACTGGACATCCCAGAAGCCTCGTCCAG
CTGGCCATCGAGTGCCTTTGCCCTGACGGCGGGTGGTTCGTTGCTCTTCT
TCGGCCGTCTGGCGGATCGCTATGGAGGGTTTGTCGTCTTCGCAGGAGGG
TTGGCCTGGCATCTTGTCTGGTCGCTCGTTGCCGGTTTCGCCAAGAATGC
CCTCATGATGTATTTTTGTCGGGCGTTGCAGGGTTTTGGCCCGGCTGCTT
TTCTTTCGGCTGGAATCATGCTCTTGGGCACTACCTATCGTCCGGGATGG
CGCAAGAACTTGGTGTTCAGTATCTACGGCGCCTGCGCGCCCATCGGATT
TGTCGCCGGAATCTTTGTCTCCGGCATGACTGGACAGTTTCTCGACTGGC
GCTGGTATTTTTGGATCGGGACGATGTTGCTCTTCCTGGCTCTCATCGCA
GCTGTCCTCTCCGTCCCAGCCAGTATTCGCCGCAAGCCTCCGCACCCTGA
CATGTCCATAGATTGGGCTGGCGCCGGTCTCTTCTTTTGCAGTCTGGTGC
TGATATTTTTCGCCATCAACGATTGCGGCCATGCACCCGACGGCTGGCGA
ACACCTTACGTGTATATCACGTTGATTGTGGGCTTTTTTGTGCTGCTAGC
TGCGATCTACGTCGAAGGTTGGGTGGCCAAGGAGCCACTTCTTCCTCTTA
GTCTCTTCCGCATCCCCCAACTATCGTCCCTACTCCTCGGACTGTTCTGC
TTCTACGGCGTGTTTGGCATCTGGCTGCTGTACTGTGTGGAGTACATGGA
GAATATCATGCACGCCTCGCCCCTGCTCGTGGTAGCATACTTTGTCCCCT
TCGCATTAGGTGGCATCTTCTTTAGCCTGATTGGAGGCTTATTCCTGCAT
GTTCTTCCCGGCACGGTTCTTCTTGTGATCTCGGGCATTGGATGGCTGAT
GGCACCACTGCTATTTGCTATCATGCCGCTCGGAGCCAGCTACTGGCCCT
ACGTATTTCCGGCCATGATCTGCGGCACCCTGGGCATGGATGTCACGTAC
AATGTGACCAACATCTTCGTTACTACCTCTCTTCCCGAGCGACAACAAGG
GCTCGCCGCTGCGGTCGCCAACAGCGTTTTGTTCTTGGGCATTAGTTTTT
GGCTGGGGTGGGGTGACTTCACCTCGGCGCAGGTGAAGGGAGACTTGCGC
TCGAGATACCAGGCTCCACTCTGGATGGCGGTGGGGTTGGCCGGGCTGGG
ACTGATCATCATGGTGCTCTTTGTGAAGATTAAGCCCGCCAAGAGTGAGG
TGACAGTGGATGAGAAGGAATGTAACTCAGGAGACACGGAGATGGTGCCC
AAGCAGGAGACAGACATTGCAGTGAATGGACGGGATGGGGATGTCCTGCA
ATAAATGGGCGACATGTACTCGGAAGCCGAGTTGGAGCGACTTGGTCGCA
TGAGGCCGACTATCTTCCCTAATTTGCTATCGGAACTGGGATTTTGCTTT
TCGCTCGTGCTCTCGCAGATTATGGCAGAATACTTCATTTCCGGCTTCAA
TGTTCTCCTCCCCTCTTTAGCTGAGGGACTGGACATCCCAGAAGCCTCGT
CCAGCTGGCCATCGAGTGCCTTTGCCCTGACGGCGGGTGGTTCGTTGCTC
TTCTTCGGCCGTCTGGCGGATCGCTATGGAGGGTTTGTCGTCTTCGCAGG
AGGGTTGGCCTGGCATCTTGTCTGGTCGCTCGTTGCCGGTTTCGCCAAGA
ATGCCCTCATGATGTATTTTTGTCGGGCGTTGCAGGGTTTTGGCCCGGCT
GCTTTTCTTTCGGCTGGAATCATGCTCTTGGGCACTACCTATCGTCCGGG
ATGGCGCAAGAACTTGGTGTTCAGTATCTACGGCGCCTGCGCGCCCATCG
GATTTGTCGCCGGAATCTTTGTCTCCGGCATGACTGGACAGTTTCTCGAC
TGGCGCTGGTATTTTTGGATCGGGACGATGTTGCTCTTCCTGGCTCTCAT
CGCAGCTGTCCTCTCCGTCCCAGCCAGTATTCGCCGCAAGCCTCCGCACC
CTGACATGTCCATAGATTGGGCTGGCGCCGGTCTCTTCTTTTGCAGTCTG
GTGCTGATATTTTTCGCCATCAACGATTGCGGCCATGCACCCGACGGCTG
GCGAACACCTTACGTGTATATCACGTTGATTGTGGGCTTTTTTGTGCTGC
TAGCTGCGATCTACGTCGAAGGTTGGGTGGCCAAGGAGCCACTTCTTCCT
CTTAGTCTCTTCCGCATCCCCCAACTATCGTCCCTACTCCTCGGACTGTT
CTGCTTCTACGGCGTGTTTGGCATCTGGCTGCTGTACTGTGTGGAGTACA
TGGAGAATATCATGCACGCCTCGCCCCTGCTCGTGGTAGCATACTTTGTC
CCCTTCGCATTAGGTGGCATCTTCTTTAGCCTGATTGGAGGCTTATTCCT
GCATGTTCTTCCCGGCACGGTTCTTCTTGTGATCTCGGGCATTGGATGGC
TGATGGCACCACTGCTATTTGCTATCATGCCGCTCGGAGCCAGCTACTGG
CCCTACGTATTTCCGGCCATGATCTGCGGCACCCTGGGCATGGATGTCAC
GTACAATGTGACCAACATCTTCGTTACTACCTCTCTTCCCGAGCGACAAC
AAGGGCTCGCCGCTGCGGTCGCCAACAGCGTTTTGTTCTTGGGCATTAGT
TTTTGGCTGGGGTGGGGTGACTTCACCTCGGCGCAGGTGAAGGGAGACTT
GCGCTCGAGATACCAGGCTCCACTCTGGATGGCGGTGGGGTTGGCCGGGC
TGGGACTGATCATCATGGTGCTCTTTGTGAAGATTAAGCCCGCCAAGAGT
GAGGTGACAGTGGATGAGAAGGAATGTAACTCAGGAGACACGGAGATGGT
GCCCAAGCAGGAGACAGACATTGCAGTGAATGGACGGGATGGGGATGTCC
TGCAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_375280M747DRAFT_375280Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_375280-T1.utr5p1M747DRAFT_375280-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_375280-T1.exon1M747DRAFT_375280-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_375280-T1.exon2M747DRAFT_375280-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_375280-T1.cdsM747DRAFT_375280-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_375280-T1.utr3p1M747DRAFT_375280-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_375280-T1M747DRAFT_375280-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
ProductMFS general substrate transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851989.1supercontigKZ851989.1:19442..21414 +
Powered by Drupal