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ASPNIDRAFT_189254-T1, ASPNIDRAFT_189254-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_189254-T1
Unique NameASPNIDRAFT_189254-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:508507..509342+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_189254-T1 ID=ASPNIDRAFT_189254-T1|Name=ASPNIDRAFT_189254-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=836bp|location=Sequence derived from alignment at ACJE01000001.1:508507..509342+ (Aspergillus niger ATCC 1015)
ATGAAGGTCTCCAGCCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGC
CACAACCATCTACCTGGCGGGGGACTCCACCATGGCCACTGGCGGCGGTG
GTTCCGACACAGCAGGTACTTTCCCACCTACACCATCACACCTTCATCCA
CTAACAAACAATCAGGCTGGGGTGACTACGTCGCCCAATACCTGAGCAAC
TCAAGCGGCATCACCGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACG
GTCCTACACGCGCGAAGGCCGGTTCGACGACATCGCCAGCACCCTTGAAG
CGGGCGACTACGTGATCATCGAGTTCGGTCACAACGACGGCGGCACGCTC
AGCTCGACCAGCGACAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGA
AGTATGCTACTCGGAATACGACGGCGTCAATGAAACCATCCTCACCTTCC
CTGCATACCTCGAGAACGCCGCCAATACATTCAAAAAAATCGGCGCGACC
GTCATCATCTCTTCGCAGACGCCCGATAACCCCTGGGAAACAGGCACTTT
CGTGGATGACCCGCCGCGGTTCGTCGAATACGCGGAGATCGCGGCGGACA
CGGCGGATACGTCGTACGTGAATCATTTTGCCTATGTGGATCAGGTGTAT
GAGGCGTTGGGAGCGGATACCGTGGATGCATTTTATCCGATTGATCATAC
GCATACGAGTCCGGCGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGG
GTGTGGTCTGTGGAAAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGAT
TTGGAGTTGGATGAGTATGAATGTTTGGATGAGTAG
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Coding sequence (CDS) from alignment at ACJE01000001.1:508507..509342+

>ASPNIDRAFT_189254-T1 ID=ASPNIDRAFT_189254-T1|Name=ASPNIDRAFT_189254-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1572bp|location=Sequence derived from alignment at ACJE01000001.1:508507..509342+ (Aspergillus niger ATCC 1015)
ATGAAGGTCTCCAGCCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGC
CACAACCATCTACCTGGCGGGGGACTCCACCATGGCCACTGGCGGCGGTG
GTTCCGACACAGCAGGCTGGGGTGACTACGTCGCCCAATACCTGAGCAAC
TCAAGCGGCATCACCGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACG
GTCCTACACGCGCGAAGGCCGGTTCGACGACATCGCCAGCACCCTTGAAG
CGGGCGACTACGTGATCATCGAGTTCGGTCACAACGACGGCGGCACGCTC
AGCTCGACCAGCGACAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGA
AGTATGCTACTCGGAATACGACGGCGTCAATGAAACCATCCTCACCTTCC
CTGCATACCTCGAGAACGCCGCCAATACATTCAAAAAAATCGGCGCGACC
GTCATCATCTCTTCGCAGACGCCCGATAACCCCTGGGAAACAGGCACTTT
CGTGGATGACCCGCCGCGGTTCGTCGAATACGCGGAGATCGCGGCGGACA
CGGCGGATACGTCGTACGTGAATCATTTTGCCTATGTGGATCAGGTGTAT
GAGGCGTTGGGAGCGGATACCGTGGATGCATTTTATCCGATTGATCATAC
GCATACGAGTCCGGCGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGG
GTGTGGTCTGTGGAAAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGAT
TTGGAGTTGGATGAGTATGAATGTTTGGATGAGTAGATGAAGGTCTCCAG
CCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGCCACAACCATCTACC
TGGCGGGGGACTCCACCATGGCCACTGGCGGCGGTGGTTCCGACACAGCA
GGCTGGGGTGACTACGTCGCCCAATACCTGAGCAACTCAAGCGGCATCAC
CGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACGGTCCTACACGCGCG
AAGGCCGGTTCGACGACATCGCCAGCACCCTTGAAGCGGGCGACTACGTG
ATCATCGAGTTCGGTCACAACGACGGCGGCACGCTCAGCTCGACCAGCGA
CAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGAAGTATGCTACTCGG
AATACGACGGCGTCAATGAAACCATCCTCACCTTCCCTGCATACCTCGAG
AACGCCGCCAATACATTCAAAAAAATCGGCGCGACCGTCATCATCTCTTC
GCAGACGCCCGATAACCCCTGGGAAACAGGCACTTTCGTGGATGACCCGC
CGCGGTTCGTCGAATACGCGGAGATCGCGGCGGACACGGCGGATACGTCG
TACGTGAATCATTTTGCCTATGTGGATCAGGTGTATGAGGCGTTGGGAGC
GGATACCGTGGATGCATTTTATCCGATTGATCATACGCATACGAGTCCGG
CGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGGGTGTGGTCTGTGGA
AAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGATTTGGAGTTGGATGA
GTATGAATGTTTGGATGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RHA1ASPNIDRAFT_189254Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_189254-T1.exon1ASPNIDRAFT_189254-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_189254-T1.exon2ASPNIDRAFT_189254-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_189254-T1.cdsASPNIDRAFT_189254-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_189254-T1ASPNIDRAFT_189254-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
NoteCAZy:CE12
DBxrefInterPro:IPR037459
DBxrefInterPro:IPR013830
DBxrefInterPro:IPR036514
DBxrefPFAM:PF13472
DBxrefPFAM:PF00657
ProductRhamnogalacturonan acetylesterase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:508507..509342 +
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