You are here

Home

ASPNIDRAFT_53850-T1, ASPNIDRAFT_53850-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53850-T1
Unique NameASPNIDRAFT_53850-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1129903..1130979+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53850-T1 ID=ASPNIDRAFT_53850-T1|Name=ASPNIDRAFT_53850-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1077bp|location=Sequence derived from alignment at ACJE01000002.1:1129903..1130979+ (Aspergillus niger ATCC 1015)
ATGAACAGACAACTGCAGCTGAATACGTCCAATCTGGGCTCCAATCCGAG
ATACTCTTATATGGAAACTCCGTTAGAGATGCATGCTCCAGGAAGCCGAC
TAAGAGACGAGATCACACCTCCAGCGGCCACAACGAACACCCAGTCAACA
GAATCACAGACTGTCATGGAGCACTTTCAACCACCGGTGAATGAGAAGTC
GCAACAATACCAGCAAGACATGGCCGTTCAAGGCTATCCCTGCGGACCAA
ATCTCGAACAACATCCAGCCAACTATGCGCCGTACGCGGATGAGATCCAA
CAAGTCCAGCAGAATCCGAAAGTGCCTGAATACTCTTACGCACAGCCTCC
ACAATCCCCGGGCCCTCTTCCAGTCAAAAAAGACCTGGAAATGTCAGAAC
CGTTACCAAATAAACAGCCTATGGCTGTTGTGCCAGACACGAATCCTTTA
CATTCGCCTCAATTACCCCAGTTTCCCCCTCCAGTCGCCCATGGGGCGCC
AGCGACACCTGCAGGATTTGACCTTATGGCATATCATCGGCCGGGTCAAA
TAACGCATCCTGATCTCGAGATTAAAGGCGGATCGTGGCGCACTAGCATG
TGCGGCTGCTATGATGTTGGGTCATGCTGTCTCGGACTACTCTGTCCATG
CATCCTATTCGGAAAAACGCAATATCGACTTTCTATGAAGTCAAGGAGTG
AAGACCCAACCAATATGCTCGGGTATGAAACGTGTAATAGCTCCTGCACC
GCTATGGCTCTGGCCTGTGGGTGTCAATGTAAGTGTGCACCTTTCCAGTT
AGTCTTCAGCACCAGCAAAGTATGCTAACAAGCTGTCGCAGGTTTTCTGG
CAACATTTCAGCGCCGTCGAACGCGAAAAGCCTATAAGATCGAAGGGGAT
ATTGTCTCCGACTGCGTTCGAGCTACGTGCTGCACATGCTGTACGCTCAT
CCAAAACGAGGTCGAGATCAAGAAACGGGAAGAAGAACGCGGGAGATATG
CTAGTGCCACGGGGGCAGCGTTAGTATCACCATACCTGCCTCCGACGCAG
ATGTCGTACGGACCACCTCCGAGGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:1129903..1130979+

>ASPNIDRAFT_53850-T1 ID=ASPNIDRAFT_53850-T1|Name=ASPNIDRAFT_53850-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2028bp|location=Sequence derived from alignment at ACJE01000002.1:1129903..1130979+ (Aspergillus niger ATCC 1015)
ATGAACAGACAACTGCAGCTGAATACGTCCAATCTGGGCTCCAATCCGAG
ATACTCTTATATGGAAACTCCGTTAGAGATGCATGCTCCAGGAAGCCGAC
TAAGAGACGAGATCACACCTCCAGCGGCCACAACGAACACCCAGTCAACA
GAATCACAGACTGTCATGGAGCACTTTCAACCACCGGTGAATGAGAAGTC
GCAACAATACCAGCAAGACATGGCCGTTCAAGGCTATCCCTGCGGACCAA
ATCTCGAACAACATCCAGCCAACTATGCGCCGTACGCGGATGAGATCCAA
CAAGTCCAGCAGAATCCGAAAGTGCCTGAATACTCTTACGCACAGCCTCC
ACAATCCCCGGGCCCTCTTCCAGTCAAAAAAGACCTGGAAATGTCAGAAC
CGTTACCAAATAAACAGCCTATGGCTGTTGTGCCAGACACGAATCCTTTA
CATTCGCCTCAATTACCCCAGTTTCCCCCTCCAGTCGCCCATGGGGCGCC
AGCGACACCTGCAGGATTTGACCTTATGGCATATCATCGGCCGGGTCAAA
TAACGCATCCTGATCTCGAGATTAAAGGCGGATCGTGGCGCACTAGCATG
TGCGGCTGCTATGATGTTGGGTCATGCTGTCTCGGACTACTCTGTCCATG
CATCCTATTCGGAAAAACGCAATATCGACTTTCTATGAAGTCAAGGAGTG
AAGACCCAACCAATATGCTCGGGTATGAAACGTGTAATAGCTCCTGCACC
GCTATGGCTCTGGCCTGTGGGTGTCAATGTTTTCTGGCAACATTTCAGCG
CCGTCGAACGCGAAAAGCCTATAAGATCGAAGGGGATATTGTCTCCGACT
GCGTTCGAGCTACGTGCTGCACATGCTGTACGCTCATCCAAAACGAGGTC
GAGATCAAGAAACGGGAAGAAGAACGCGGGAGATATGCTAGTGCCACGGG
GGCAGCGTTAGTATCACCATACCTGCCTCCGACGCAGATGTCGTACGGAC
CACCTCCGAGGTGAATGAACAGACAACTGCAGCTGAATACGTCCAATCTG
GGCTCCAATCCGAGATACTCTTATATGGAAACTCCGTTAGAGATGCATGC
TCCAGGAAGCCGACTAAGAGACGAGATCACACCTCCAGCGGCCACAACGA
ACACCCAGTCAACAGAATCACAGACTGTCATGGAGCACTTTCAACCACCG
GTGAATGAGAAGTCGCAACAATACCAGCAAGACATGGCCGTTCAAGGCTA
TCCCTGCGGACCAAATCTCGAACAACATCCAGCCAACTATGCGCCGTACG
CGGATGAGATCCAACAAGTCCAGCAGAATCCGAAAGTGCCTGAATACTCT
TACGCACAGCCTCCACAATCCCCGGGCCCTCTTCCAGTCAAAAAAGACCT
GGAAATGTCAGAACCGTTACCAAATAAACAGCCTATGGCTGTTGTGCCAG
ACACGAATCCTTTACATTCGCCTCAATTACCCCAGTTTCCCCCTCCAGTC
GCCCATGGGGCGCCAGCGACACCTGCAGGATTTGACCTTATGGCATATCA
TCGGCCGGGTCAAATAACGCATCCTGATCTCGAGATTAAAGGCGGATCGT
GGCGCACTAGCATGTGCGGCTGCTATGATGTTGGGTCATGCTGTCTCGGA
CTACTCTGTCCATGCATCCTATTCGGAAAAACGCAATATCGACTTTCTAT
GAAGTCAAGGAGTGAAGACCCAACCAATATGCTCGGGTATGAAACGTGTA
ATAGCTCCTGCACCGCTATGGCTCTGGCCTGTGGGTGTCAATGTTTTCTG
GCAACATTTCAGCGCCGTCGAACGCGAAAAGCCTATAAGATCGAAGGGGA
TATTGTCTCCGACTGCGTTCGAGCTACGTGCTGCACATGCTGTACGCTCA
TCCAAAACGAGGTCGAGATCAAGAAACGGGAAGAAGAACGCGGGAGATAT
GCTAGTGCCACGGGGGCAGCGTTAGTATCACCATACCTGCCTCCGACGCA
GATGTCGTACGGACCACCTCCGAGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53850ASPNIDRAFT_53850Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53850-T1.exon1ASPNIDRAFT_53850-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53850-T1.exon2ASPNIDRAFT_53850-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53850-T1.cdsASPNIDRAFT_53850-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53850-T1ASPNIDRAFT_53850-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR006461
DBxrefPFAM:PF04749
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1129903..1130979 +
Powered by Drupal