You are here

Home

ASPNIDRAFT_41928-T1, ASPNIDRAFT_41928-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41928-T1
Unique NameASPNIDRAFT_41928-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1434909..1435934-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41928-T1 ID=ASPNIDRAFT_41928-T1|Name=ASPNIDRAFT_41928-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1026bp|location=Sequence derived from alignment at ACJE01000002.1:1434909..1435934- (Aspergillus niger ATCC 1015)
ATGGTCAAGCGCAAGGAACTCAAAGACAATGATGTCGAGATGTCGGGGAC
GGATCCCCGCGTCGACGGCGACGACTCCGACGAGGTACATACATACCAAT
ACCCCTCCAAGCAATATACAAGCCCAGCCAAGCAACAACCTGAAATACGC
AAAGTAGAATTAACACATTGAGTCAGGACATGGACATGGTCAACGTCGAT
TTCGAATGGTTCGACCCTCAACCGGCTGTCGACTTCCACGGTCTGAAGAA
CCTCCTCCGCCAGCTCTTCGACACCGACGCCCAGATCTTCGACATGTCCG
CATTGGCCGATTTGATCCTCTCGCAACCTCTGCTTGGATCGACTGTTAAA
GTAGATGGGAATGAGTCGGATCCGTATGCGTTCTTGACTGTGTTGAACCT
TCAGGAGCACAAGGTGCGTCTCCGTTCTCCTTGGCATAAGGATAGAAGGA
AGAGAATCTAACAAAAACCAGGACAAACCCGTAATCAAAGACCTCACAGC
CTACCTCCAGCGCAAAGCCAATGCCGTACCAACACTCGCACCCCTGGCTC
AACTCCTCTCCCAAACTCCCATCCCTCCCATCGGCCTGATCCTGACGGAA
CGTCTCATCAACATGCCCGCAGAGGTCGTACCGCCTATGTACACGATGCT
GCAAGAGGAAATCGAATGGGCGATCAAGGACAAGGAGCCTTACAATTTCT
CGCACTATTTGATCGTGTCGAAGACGTACGAAGAGGTCGAGTCGAAGCTA
GATGCGGAGGAATCGCGGCCGCAAAAGAAGAAGAAGAAGGCTGCGGGTGG
GGAGAAGGCCGAGCGGTTCCTCTTCCATCCTGAGGATGAGGTTCTGGAAA
GGCATGCCGTGTGTGTTGGGCCTGTGGAGTATACGCATAAGGCGGAGGAG
GGACTGTCGGATGCGAAGCGCGCATTCCAGGATTTGGGTATTGTGACGAA
GGGGAGCTTGATTTTGTTGGAGGCGAGCAAGTTGGATGGGGCGGTTAAAG
ATATGGCGGAGTACTTTAAGCCATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:1434909..1435934-

>ASPNIDRAFT_41928-T1 ID=ASPNIDRAFT_41928-T1|Name=ASPNIDRAFT_41928-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2628bp|location=Sequence derived from alignment at ACJE01000002.1:1434909..1435934- (Aspergillus niger ATCC 1015)
GACAAACCCGTAATCAAAGACCTCACAGCCTACCTCCAGCGCAAAGCCAA
TGCCGTACCAACACTCGCACCCCTGGCTCAACTCCTCTCCCAAACTCCCA
TCCCTCCCATCGGCCTGATCCTGACGGAACGTCTCATCAACATGCCCGCA
GAGGTCGTACCGCCTATGTACACGATGCTGCAAGAGGAAATCGAATGGGC
GATCAAGGACAAGGAGCCTTACAATTTCTCGCACTATTTGATCGTGTCGA
AGACGTACGAAGAGGTCGAGTCGAAGCTAGATGCGGAGGAATCGCGGCCG
CAAAAGAAGAAGAAGAAGGCTGCGGGTGGGGAGAAGGCCGAGCGGTTCCT
CTTCCATCCTGAGGATGAGGTTCTGGAAAGGCATGCCGTGTGTGTTGGGC
CTGTGGAGTATACGCATAAGGCGGAGGAGGGACTGTCGGATGCGAAGCGC
GCATTCCAGGATTTGGGTATTGTGACGAAGGGGAGCTTGATTTTGTTGGA
GGCGAGCAAGTTGGATGGGGCGGTTAAAGATATGGCGGAGTACTTTAAGC
CATAGGACATGGACATGGTCAACGTCGATTTCGAATGGTTCGACCCTCAA
CCGGCTGTCGACTTCCACGGTCTGAAGAACCTCCTCCGCCAGCTCTTCGA
CACCGACGCCCAGATCTTCGACATGTCCGCATTGGCCGATTTGATCCTCT
CGCAACCTCTGCTTGGATCGACTGTTAAAGTAGATGGGAATGAGTCGGAT
CCGTATGCGTTCTTGACTGTGTTGAACCTTCAGGAGCACAAGATGGTCAA
GCGCAAGGAACTCAAAGACAATGATGTCGAGATGTCGGGGACGGATCCCC
GCGTCGACGGCGACGACTCCGACGAGGACAAACCCGTAATCAAAGACCTC
ACAGCCTACCTCCAGCGCAAAGCCAATGCCGTACCAACACTCGCACCCCT
GGCTCAACTCCTCTCCCAAACTCCCATCCCTCCCATCGGCCTGATCCTGA
CGGAACGTCTCATCAACATGCCCGCAGAGGTCGTACCGCCTATGTACACG
ATGCTGCAAGAGGAAATCGAATGGGCGATCAAGGACAAGGAGCCTTACAA
TTTCTCGCACTATTTGATCGTGTCGAAGACGTACGAAGAGGTCGAGTCGA
AGCTAGATGCGGAGGAATCGCGGCCGCAAAAGAAGAAGAAGAAGGCTGCG
GGTGGGGAGAAGGCCGAGCGGTTCCTCTTCCATCCTGAGGATGAGGTTCT
GGAAAGGCATGCCGTGTGTGTTGGGCCTGTGGAGTATACGCATAAGGCGG
AGGAGGGACTGTCGGATGCGAAGCGCGCATTCCAGGATTTGGGTATTGTG
ACGAAGGGGAGCTTGATTTTGTTGGAGGCGAGCAAGTTGGATGGGGCGGT
TAAAGATATGGCGGAGTACTTTAAGCCATAGGACATGGACATGGTCAACG
TCGATTTCGAATGGTTCGACCCTCAACCGGCTGTCGACTTCCACGGTCTG
AAGAACCTCCTCCGCCAGCTCTTCGACACCGACGCCCAGATCTTCGACAT
GTCCGCATTGGCCGATTTGATCCTCTCGCAACCTCTGCTTGGATCGACTG
TTAAAGTAGATGGGAATGAGTCGGATCCGTATGCGTTCTTGACTGTGTTG
AACCTTCAGGAGCACAAGATGGTCAAGCGCAAGGAACTCAAAGACAATGA
TGTCGAGATGTCGGGGACGGATCCCCGCGTCGACGGCGACGACTCCGACG
AGGACAAACCCGTAATCAAAGACCTCACAGCCTACCTCCAGCGCAAAGCC
AATGCCGTACCAACACTCGCACCCCTGGCTCAACTCCTCTCCCAAACTCC
CATCCCTCCCATCGGCCTGATCCTGACGGAACGTCTCATCAACATGCCCG
CAGAGGTCGTACCGCCTATGTACACGATGCTGCAAGAGGAAATCGAATGG
GCGATCAAGGACAAGGAGCCTTACAATTTCTCGCACTATTTGATCGTGTC
GAAGACGTACGAAGAGGTCGAGTCGAAGCTAGATGCGGAGGAATCGCGGC
CGCAAAAGAAGAAGAAGAAGGCTGCGGGTGGGGAGAAGGCCGAGCGGTTC
CTCTTCCATCCTGAGGATGAGGTTCTGGAAAGGCATGCCGTGTGTGTTGG
GCCTGTGGAGTATACGCATAAGGCGGAGGAGGGACTGTCGGATGCGAAGC
GCGCATTCCAGGATTTGGGTATTGTGACGAAGGGGAGCTTGATTTTGTTG
GAGGCGAGCAAGTTGGATGGGGCGGTTAAAGATATGGCGGAGTACTTTAA
GCCATAGGACATGGACATGGTCAACGTCGATTTCGAATGGTTCGACCCTC
AACCGGCTGTCGACTTCCACGGTCTGAAGAACCTCCTCCGCCAGCTCTTC
GACACCGACGCCCAGATCTTCGACATGTCCGCATTGGCCGATTTGATCCT
CTCGCAACCTCTGCTTGGATCGACTGTTAAAGTAGATGGGAATGAGTCGG
ATCCGTATGCGTTCTTGACTGTGTTGAACCTTCAGGAGCACAAGATGGTC
AAGCGCAAGGAACTCAAAGACAATGATGTCGAGATGTCGGGGACGGATCC
CCGCGTCGACGGCGACGACTCCGACGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
BCP1ASPNIDRAFT_41928Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41928-T1ASPNIDRAFT_41928-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41928-T1.cdsASPNIDRAFT_41928-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41928-T1.exon3ASPNIDRAFT_41928-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41928-T1.exon2ASPNIDRAFT_41928-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41928-T1.exon1ASPNIDRAFT_41928-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG092649VA
DBxrefInterPro:IPR025602
DBxrefPFAM:PF13862
ProductMss4p nuclear export
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1434909..1435934 -
Powered by Drupal