You are here

Home

ASPNIDRAFT_50833-T1, ASPNIDRAFT_50833-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_50833-T1
Unique NameASPNIDRAFT_50833-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:189633..190198+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_50833-T1 ID=ASPNIDRAFT_50833-T1|Name=ASPNIDRAFT_50833-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=566bp|location=Sequence derived from alignment at ACJE01000003.1:189633..190198+ (Aspergillus niger ATCC 1015)
ATGAACAACCTCCGCCTTGAGGCCGAGGAGGCCCAGGAGAAGGTTGAGGA
GCTCAAGAGCAAGGTGAAGACGCTGGAGCAGGAGAACCTCGCCAAGGAGC
AGGAGATCACATCCCTCAACCACCGGAACCAGCTTCTGGAGGGTGAGGTC
GAGAAGCTCGAGACCGCTCTCAAGGAGGCCAAGGACTCTGCCAACCAGAG
TGCTCAGCACGATACTCAGAACGAGGCTCTCCAGCGCCGTCTGCAACTGC
TGGAAGAAGAGGCCGAAGACGCTGACCGGAACCTCCGGGAGACTAACGAG
AAGTACGTTTATTTTCCAAATCCGCCCCCGCCCCCTCCCCGCACCTCCTT
TCTCATGAGTCCCCAACGGAGTGACGCATATACTGACTACGCTGGTGCTC
TAGGCTCCGCCAAACCGACGTCAAGGCTGGCCACTACGAACGCAAGGTGC
AGGCTCTCGAAGCGTCTCGTGACCAGTGGGAGAGCAAGTACGAGGAGATG
GCGAAGAAATACGCCGAGTTGCAGAAGGATCTGCACGACCTCGAGGTCTC
CATCAGCAATGTTTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000003.1:189633..190198+

>ASPNIDRAFT_50833-T1 ID=ASPNIDRAFT_50833-T1|Name=ASPNIDRAFT_50833-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=930bp|location=Sequence derived from alignment at ACJE01000003.1:189633..190198+ (Aspergillus niger ATCC 1015)
ATGAACAACCTCCGCCTTGAGGCCGAGGAGGCCCAGGAGAAGGTTGAGGA
GCTCAAGAGCAAGGTGAAGACGCTGGAGCAGGAGAACCTCGCCAAGGAGC
AGGAGATCACATCCCTCAACCACCGGAACCAGCTTCTGGAGGGTGAGGTC
GAGAAGCTCGAGACCGCTCTCAAGGAGGCCAAGGACTCTGCCAACCAGAG
TGCTCAGCACGATACTCAGAACGAGGCTCTCCAGCGCCGTCTGCAACTGC
TGGAAGAAGAGGCCGAAGACGCTGACCGGAACCTCCGGGAGACTAACGAG
AAGCTCCGCCAAACCGACGTCAAGGCTGGCCACTACGAACGCAAGGTGCA
GGCTCTCGAAGCGTCTCGTGACCAGTGGGAGAGCAAGTACGAGGAGATGG
CGAAGAAATACGCCGAGTTGCAGAAGGATCTGCACGACCTCGAGGTCTCC
ATCAGCAATGTTTAAATGAACAACCTCCGCCTTGAGGCCGAGGAGGCCCA
GGAGAAGGTTGAGGAGCTCAAGAGCAAGGTGAAGACGCTGGAGCAGGAGA
ACCTCGCCAAGGAGCAGGAGATCACATCCCTCAACCACCGGAACCAGCTT
CTGGAGGGTGAGGTCGAGAAGCTCGAGACCGCTCTCAAGGAGGCCAAGGA
CTCTGCCAACCAGAGTGCTCAGCACGATACTCAGAACGAGGCTCTCCAGC
GCCGTCTGCAACTGCTGGAAGAAGAGGCCGAAGACGCTGACCGGAACCTC
CGGGAGACTAACGAGAAGCTCCGCCAAACCGACGTCAAGGCTGGCCACTA
CGAACGCAAGGTGCAGGCTCTCGAAGCGTCTCGTGACCAGTGGGAGAGCA
AGTACGAGGAGATGGCGAAGAAATACGCCGAGTTGCAGAAGGATCTGCAC
GACCTCGAGGTCTCCATCAGCAATGTTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50833ASPNIDRAFT_50833Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50833-T1.exon1ASPNIDRAFT_50833-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50833-T1.exon2ASPNIDRAFT_50833-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50833-T1.cdsASPNIDRAFT_50833-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50833-T1ASPNIDRAFT_50833-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264XUV
DBxrefInterPro:IPR000533
DBxrefPFAM:PF12718
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:189633..190198 +
Powered by Drupal