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ASPNIDRAFT_206219-T1, ASPNIDRAFT_206219-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_206219-T1
Unique NameASPNIDRAFT_206219-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:942734..943739+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_206219-T1 ID=ASPNIDRAFT_206219-T1|Name=ASPNIDRAFT_206219-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1006bp|location=Sequence derived from alignment at ACJE01000004.1:942734..943739+ (Aspergillus niger ATCC 1015)
CTTCCTCAATCCCCTCTTCTCTCCTTCTCCTTCCCACGCCCTTCCCCCCT
TCTCCACCCTCCATTAGCTTCTCTGCAGCTCCTGTTTTTCCGGTCAATTG
CTTTCCCTCCCGGAACAGTTCGTCATCATGCGCTGCGCTAGCTTCGCCGT
GGCCATCCTGGCCCTTTTCACTGGTCTCTACAGCTACCTGAACGCGCGCC
TGGAGCAGTTCTACATCTTCGATCCCTCCCACCTGCACGACCTGTCGCAG
CGCGCCATTGCCGCTCATGGCAATGACACTCGCTCGGTGGTGAACTTCAT
CGTCTCCGAGCTGGGCGAGAAGGTCACCGACACGCACCTGAACCTGGACG
AGGAATGGGTCTTCAACAACGCCGGTGGTGCGATGGGGGCAATGTATATT
ATCCATGCTAGTGCGTCCCCTCTTTTGCTCCATACCACCTCTATAATTAT
CTATAGTGCCTGAACTAAGCTTTGATTCTCCTATAGGTATCACGGAGTAC
TTGATCATTTTCGGTATGGCTTCCCCTGTATCCCGGATATTTTTATGCCC
TCGATTGCACGAGCTAACTACTCTCTCCCTGTCCATTAGGCACCGCTATT
GGTACTGAGGGCCACACTGGCCGTCACACGGCCGACGACTACTTCAACAT
TCTTCAGGGCACCCAGCTCGCCTACGTCCCTGGATCCTACGAGCCCGAGG
TTTACCCCCAGGGTAGCGTGCACCACCTCCGCCGCGGTGAGGTCAAGCAG
TACAAGATGGATGAGTCGTGCTTTGCTCTGGAGTACGCCCGTGGCTGGAT
TCCCCCGATGCTCTTCTTCGGATACGCCGATACCTTCTCCAGCACTCTCG
ACTTCCCGACTCTGTGGGCGACGTCCAGAATCACTGGTCGCGAGATGATC
TCCAACCTGCTCAAGGGCAAGATGTGAATGATAGATGGCGAGATGATGGG
TATATGTATAATACTATTACTATTCTCACTATGTTAGATAGACGACGATG
TTGTTC
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Coding sequence (CDS) from alignment at ACJE01000004.1:942734..943739+

>ASPNIDRAFT_206219-T1 ID=ASPNIDRAFT_206219-T1|Name=ASPNIDRAFT_206219-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1944bp|location=Sequence derived from alignment at ACJE01000004.1:942734..943739+ (Aspergillus niger ATCC 1015)
ATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCT
CTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCT
CCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGAC
ACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCAC
CGACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTG
GTGCGATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTG
ATCATTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACAC
GGCCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCC
CTGGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTC
CGCCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCT
GGAGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCG
ATACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGA
ATCACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAAT
GCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCTCT
ACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCC
CACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGACAC
TCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCG
ACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGT
GCGATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTGAT
CATTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGG
CCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCT
GGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCG
CCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGG
AGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGAT
ACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAAT
CACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAATGC
GCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCTCTAC
AGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCCCA
CCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGACACTC
GCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCGAC
ACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGTGC
GATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTGATCA
TTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGGCC
GACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCTGG
ATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCGCC
GCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGGAG
TACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGATAC
CTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAATCA
CTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERG1ASPNIDRAFT_206219Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206219-T1ASPNIDRAFT_206219-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206219-T1.utr5p1ASPNIDRAFT_206219-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206219-T1.exon1ASPNIDRAFT_206219-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206219-T1.exon2ASPNIDRAFT_206219-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_206219-T1.exon3ASPNIDRAFT_206219-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206219-T1.cdsASPNIDRAFT_206219-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_206219-T1.utr3p1ASPNIDRAFT_206219-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006716
DBxrefPFAM:PF04622
ProductSqualene epoxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:942734..943739 +
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