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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:1848688..1850141+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_205884-T1 ID=ASPNIDRAFT_205884-T1|Name=ASPNIDRAFT_205884-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1454bp|location=Sequence derived from alignment at ACJE01000004.1:1848688..1850141+ (Aspergillus niger ATCC 1015)
GCGGAGTCCTCCAATTCCGCCGCGGCCTCAGGCCCGGCCCAGTCCGCAGC
GTCTACCAGCGCTCCCAAGCCCTCCAACCCAGCCTTCAGAATGCTTGGTA
TAGATCCCCAATGCCCTCAGCCAGTATCCTTATACCTAATAGCCTTCAAG
GAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATCTTC
TTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGAGAGA
GAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACATCTCCA
AGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTCCTG
TCCGCGCCACCGGGTGACGGTATCCGCGTGGCTCGCGACCACTTCAAAGA
ATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAATCATCG
AAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATTCGC
AAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACCCCAC
GGTCGAAGACGTCGTTTTCGCCGCAAGGACGCAGATGGGCGTTATAGAGG
AGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATGGAAGGAG
TACATTCGCGGTCTGCACGAAGGTTGGCTGGGTCCTCTTGATCCTCCCCC
TCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGCACACCCG
CCGCAGAGGCCGCCTCTGAGACCAAGGAGGGCGATGCCAATGCCCCCGAG
CAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACACCAGC
TTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTACTATCC
CCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCCTGGGT
TTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCCACAT
GGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCATACA
GCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATCTCC
GACGATACCCTTGGCAGCACCACCTATGAACAACAGACCGTCCTCGAGGA
GGAAGAAAAGGAATGGCACAAGTCCGTCCACCGCAAGGACGAAGCAAACC
CTGACAAGGAACGCGAATGGCTCGACGACATCGTCATCGACCCGCGCCTC
GCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCCGCGC
TCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGCCCTG
TTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATACGGAGAG
GATGAGGAGACGTTGAGGAGGAAGCCTATCTTGGGCAACCTTGATGAGGA
TTAA back to topCoding sequence (CDS) from alignment at ACJE01000004.1:1848688..1850141+ >ASPNIDRAFT_205884-T1 ID=ASPNIDRAFT_205884-T1|Name=ASPNIDRAFT_205884-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2622bp|location=Sequence derived from alignment at ACJE01000004.1:1848688..1850141+ (Aspergillus niger ATCC 1015)
ATGCTTGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGAT
GATCTTCTTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACC
GGAGAGAGAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCAC
ATCTCCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGT
CTTCCTGTCCGCGCCACCGGGTGACGGTATCCGCGTGGCTCGCGACCACT
TCAAAGAATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAA
ATCATCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCG
CATTCGCAAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGG
ACCCCACGGTCGAAGACGTCGTTTTCGCCGCAAGGACGCAGATGGGCGTT
ATAGAGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATG
GAAGGAGTACATTCGCGGTCTGCACGAAGGTTGGCTGGGTCCTCTTGATC
CTCCCCCTCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGC
ACACCCGCCGCAGAGGCCGCCTCTGAGACCAAGGAGGGCGATGCCAATGC
CCCCGAGCAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGA
CACCAGCTTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGT
ACTATCCCCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACAT
CCTGGGTTTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGC
GCCACATGGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCC
TCATACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCC
CATCTCCGACGATACCCTTGGCAGCACCACCTATGAACAACAGACCGTCC
TCGAGGAGGAAGAAAAGGAATGGCACAAGTCCGTCCACCGCAAGGACGAA
GCAAACCCTGACAAGGAACGCGAATGGCTCGACGACATCGTCATCGACCC
GCGCCTCGCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGG
CCCGCGCTCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAA
CGCCCTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATA
CGGAGAGGATGAGGAGACGTTGAGGAGGAAGCCTATCTTGGGCAACCTTG
ATGAGGATTAAATGCTTGGAATGCCGAACCTTCGCATGAAACTTCCCTCT
CGGAATTGGATGATCTTCTTCACCATCACCGGCTCGTTCGCCGCAGCTGT
CATTTACGACCGGAGAGAGAAGCGCCGCGCGCAACAAAAATGGAGTGATC
TCGTCGCTCACATCTCCAAGGAGCATCTTCCCATCGAGCAAACCCGACGC
AAAATCAACGTCTTCCTGTCCGCGCCACCGGGTGACGGTATCCGCGTGGC
TCGCGACCACTTCAAAGAATACGTTAAGCCGATCCTCGTGGCAGCGGCAC
TAGACTACCAAATCATCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGT
TACGCGGAGCGCATTCGCAAGTGGAGACGTAAGGCAGGCGAACCGAGTAC
GGTGGTGGAGGACCCCACGGTCGAAGACGTCGTTTTCGCCGCAAGGACGC
AGATGGGCGTTATAGAGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGT
CGTCACACATGGAAGGAGTACATTCGCGGTCTGCACGAAGGTTGGCTGGG
TCCTCTTGATCCTCCCCCTCCGCCTCCTGCCACGGAGGATCCCGCTCCTG
TGGAATCCAGCACACCCGCCGCAGAGGCCGCCTCTGAGACCAAGGAGGGC
GATGCCAATGCCCCCGAGCAGGAAAAGAAGGAAGAGAAGCCTGCTAAACC
CGTGGGACCGACACCAGCTTACATCTCCACATCCGACTACTCATCGCAAC
CCCTCCCGCGTACTATCCCCCAGACTCTTTCAGGCTCCGTCCCCATCGCC
TTCCCCCACATCCTGGGTTTCCTCAACACCCCCATCAGACTCTACCGCTA
CCTTAACCAGCGCCACATGGCCGAGAGCGTAGGCCGCGACGTCGCAGCCA
TTGTCCTGGCCTCATACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCG
GATGCCTCCCCCATCTCCGACGATACCCTTGGCAGCACCACCTATGAACA
ACAGACCGTCCTCGAGGAGGAAGAAAAGGAATGGCACAAGTCCGTCCACC
GCAAGGACGAAGCAAACCCTGACAAGGAACGCGAATGGCTCGACGACATC
GTCATCGACCCGCGCCTCGCCTCCCGCATGCATCGCTACAGCGTCTCGCC
TGAGGAAGAGGCCCGCGCTCAGCGCATCCTCGAAGGCCAGGAATACATCC
TGGGTCAGGAACGCCCTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTG
AAGTATGGATACGGAGAGGATGAGGAGACGTTGAGGAGGAAGCCTATCTT
GGGCAACCTTGATGAGGATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263XVS |
| DBxref | InterPro:IPR021056 |
| DBxref | PFAM:PF11711 |
| Product | mitochondrial import inner membrane translocase subunit tim54 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:1848688..1850141 + |
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