You are here

Home

ASPNIDRAFT_196195-T1, ASPNIDRAFT_196195-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_196195-T1
Unique NameASPNIDRAFT_196195-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2487497..2488102+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_196195-T1 ID=ASPNIDRAFT_196195-T1|Name=ASPNIDRAFT_196195-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=606bp|location=Sequence derived from alignment at ACJE01000004.1:2487497..2488102+ (Aspergillus niger ATCC 1015)
CAAACCGCAACCATGGCCGGTCCCAGCAAGTGTATGTCCTTCGCCTCTAA
ATCTTCTCAATGCCAATTGCTAACCGCTATCTGCAGCTTTGATCCTTGAT
CCGGCCCTCCAGAAATACTACGGTCCGTTTGTTCCCGCCAATAAGACTCG
ACGCATTACAGTGCTCCTCCAGCGATAGCAATTGCTACTTATGAAGGAGT
TCGGATGGATGAGGGATGATAAATGACTGACGAAGTGGTATCTTGCAGAA
CTCAACGCCAACCGCTACAAGTACTTCCGGTGGACGCCGCGCCATGCCTG
GTTCTCGTTCCTCTACATGGCTTTGATTCCCGGTGCGCTGGGCTATGTCG
CTTATAAGACTGATGTGAGTGATCTGGGTTTTGATTGGGATCCGGTGGAT
GATAGGAGTGTGGCTAATGGGTATGTGTAGGGTCTGTACCAGCTGCGTGG
AAAGCGCAGGGGCGATACGATTGTCGAGTGGTAGATCGATTCGATTCTCT
CAAGCATGATGGTGATGGGAGGAAGAAAAGCGTGATGTGATGTGATGGGA
CGGGCTGGATGTGTATCTACTACTATTATACCGTTATTGAAGATTTCGTT
TACTAC
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:2487497..2488102+

>ASPNIDRAFT_196195-T1 ID=ASPNIDRAFT_196195-T1|Name=ASPNIDRAFT_196195-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=900bp|location=Sequence derived from alignment at ACJE01000004.1:2487497..2488102+ (Aspergillus niger ATCC 1015)
ATGGCCGGTCCCAGCAAGTCTTTGATCCTTGATCCGGCCCTCCAGAAATA
CTACGAACTCAACGCCAACCGCTACAAGTACTTCCGGTGGACGCCGCGCC
ATGCCTGGTTCTCGTTCCTCTACATGGCTTTGATTCCCGGTGCGCTGGGC
TATGTCGCTTATAAGACTGATGGTCTGTACCAGCTGCGTGGAAAGCGCAG
GGGCGATACGATTGTCGAGTGGTAGATGGCCGGTCCCAGCAAGTCTTTGA
TCCTTGATCCGGCCCTCCAGAAATACTACGAACTCAACGCCAACCGCTAC
AAGTACTTCCGGTGGACGCCGCGCCATGCCTGGTTCTCGTTCCTCTACAT
GGCTTTGATTCCCGGTGCGCTGGGCTATGTCGCTTATAAGACTGATGGTC
TGTACCAGCTGCGTGGAAAGCGCAGGGGCGATACGATTGTCGAGTGGTAG
ATGGCCGGTCCCAGCAAGTCTTTGATCCTTGATCCGGCCCTCCAGAAATA
CTACGAACTCAACGCCAACCGCTACAAGTACTTCCGGTGGACGCCGCGCC
ATGCCTGGTTCTCGTTCCTCTACATGGCTTTGATTCCCGGTGCGCTGGGC
TATGTCGCTTATAAGACTGATGGTCTGTACCAGCTGCGTGGAAAGCGCAG
GGGCGATACGATTGTCGAGTGGTAGATGGCCGGTCCCAGCAAGTCTTTGA
TCCTTGATCCGGCCCTCCAGAAATACTACGAACTCAACGCCAACCGCTAC
AAGTACTTCCGGTGGACGCCGCGCCATGCCTGGTTCTCGTTCCTCTACAT
GGCTTTGATTCCCGGTGCGCTGGGCTATGTCGCTTATAAGACTGATGGTC
TGTACCAGCTGCGTGGAAAGCGCAGGGGCGATACGATTGTCGAGTGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196195ASPNIDRAFT_196195Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196195-T1ASPNIDRAFT_196195-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196195-T1.utr5p1ASPNIDRAFT_196195-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196195-T1.exon1ASPNIDRAFT_196195-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196195-T1.exon2ASPNIDRAFT_196195-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196195-T1.exon3ASPNIDRAFT_196195-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196195-T1.exon4ASPNIDRAFT_196195-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196195-T1.cdsASPNIDRAFT_196195-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196195-T1.utr3p1ASPNIDRAFT_196195-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009866
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2487497..2488102 +
Powered by Drupal