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ASPNIDRAFT_196062-T1, ASPNIDRAFT_196062-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_196062-T1
Unique NameASPNIDRAFT_196062-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3023395..3025108-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_196062-T1 ID=ASPNIDRAFT_196062-T1|Name=ASPNIDRAFT_196062-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1714bp|location=Sequence derived from alignment at ACJE01000004.1:3023395..3025108- (Aspergillus niger ATCC 1015)
GATTTTTTTTGCAAAAGCTTCTATTCAAGGTCCTCGAGACTCGACAATTC
CGGATTTTCCTTCTCCCGAACGGGCCTTCCTTGCCAATTTTTCTTTTTCC
TATTCTCCGGTTAAACCGCAACCGAAGAATCGAAGCATCAGTCCGATAAT
TTTTCTGGACTGAGAGCATTTGGACTTTACGTCTTCGTCGACCTTTTTCG
ATTTAAATCACATATATCACAATGGCATTCGGTGGTCCTCGTGGTGGTGG
CCGTGGTGGTGGCCGTGGTGCTCCTCGTGGAGGTGGTGGCGGCCGTGGTG
GTAGAGGTTTGTTCACCATCGATTGATTTCATCTTGGGAGAAACGTGGCA
GGCAGGCATATGTGATCTTTTCGCATTGTTGTTGTCGATCATGTTGGAAC
TTGCTTCTTGTGACGGAGAACCTTGTTCTTGTCCCAGAGCATATCAGGTT
TTCCAATATGAGCGACTCGACTCGCGTGCCGGAACTGCGGTTATCCCTTC
ACGGAAAAAAGGAACATGTCGCTAATCTTTGCACGTTCTATAGGCGGTCT
TGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCTCCCCGCGGTG
GTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGGTGGTCGCGGC
GGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTGTAGGTGTTTC
CTGTTAAATCGATCGAGAAGAGAGACGTTGTATGGAGTCTAACCGGGATT
CGTCTAGGAACCCCACCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTA
AGGAAGATTTGCTCGTCACCAAGAACCTTACTCCCGGAGAGGCCGTCTAC
GGTGAGAAGCGCATCTCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGT
GACCAAGACCGAATACCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTG
CCGGTATCCTGGGTGGTCTGGATGACATCTACATGCGCCCTGGCTCCAAG
GTCCTGTATCTCGGTTCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGA
TATCGTCGGACCTACTGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTT
CCGGCCGTGACTTGATCGGCATGGCTACCCACCGCACCAACGTTATCCCC
ATCGTCGAGGACGCCAGACACCCTCTTCGTTACCGTATGCTCGTCCCCAT
GGTCGATGTCATCTTCGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTG
TCGGCCTGAACGCCCACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTC
TCCGTCAAGGCCAACTGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTT
CGCTCGTGAAGTCCAGAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAAC
AGCTGACCCTGGAGCCTTTCGAACGTGACCACTGTATAGTGTCTGGTATC
TACAAGCGCTCTGCATGAATTTAAGAAACAAAAAGAATCCGGTGGTTTTT
GCTCTTTTGTCTCTCTCATGTCATAATTACTTATGCTTCCCCTTTATACG
GCGTCGAGTGTTCCGTGATCTGTTGCAATTTTCTTCGATTTTTTCCTTGT
GTGTCCTCATGTCCAGGTTTCTTAGATGTACTTCTTGAGTCAGAAAATTT
CGAGGTTTACGGTTTCTGGTCGTTCAAGAATTTAGCTGCTAATTAAGCTG
GTCAATGATTCACC
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Coding sequence (CDS) from alignment at ACJE01000004.1:3023395..3025108-

>ASPNIDRAFT_196062-T1 ID=ASPNIDRAFT_196062-T1|Name=ASPNIDRAFT_196062-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2826bp|location=Sequence derived from alignment at ACJE01000004.1:3023395..3025108- (Aspergillus niger ATCC 1015)
GAACCCCACCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGA
TTTGCTCGTCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGA
AGCGCATCTCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAG
ACCGAATACCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTAT
CCTGGGTGGTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGT
ATCTCGGTTCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTC
GGACCTACTGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCG
TGACTTGATCGGCATGGCTACCCACCGCACCAACGTTATCCCCATCGTCG
AGGACGCCAGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGAT
GTCATCTTCGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCT
GAACGCCCACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCA
AGGCCAACTGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGT
GAAGTCCAGAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGAC
CCTGGAGCCTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTACAAGC
GCTCTGCATGAGCGGTCTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCC
GTGGTGCTCCCCGCGGTGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCT
CGCGGCGGTGGTCGCGGCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGT
CATCATTATGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCC
GTGGTGCTCCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGAACCCCA
CCGTCACGCTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCG
TCACCAAGAACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATC
TCTGTTGAGTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATA
CCGTGTCTGGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTG
GTCTGGATGACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGT
TCCGCCAGCGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTAC
TGGTAACGTCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGA
TCGGCATGGCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCC
AGACACCCTCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTT
CGCCGATGTTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCC
ACATGTTCCTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAAC
TGTATCGACAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCA
GAAGATGAGAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGC
CTTTCGAACGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCA
TGAGCGGTCTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCT
CCCCGCGGTGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGG
TGGTCGCGGCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTA
TGGCATTCGGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGCT
CCTCGTGGAGGTGGTGGCGGCCGTGGTGGTAGAGGAACCCCACCGTCACG
CTGGTGTCTTCGTCGCCCGTGGTGGTAAGGAAGATTTGCTCGTCACCAAG
AACCTTACTCCCGGAGAGGCCGTCTACGGTGAGAAGCGCATCTCTGTTGA
GTCCCCCGCTGAGGAGGATGGCACTGTGACCAAGACCGAATACCGTGTCT
GGAACCCCTTCCGTTCCAAGTTGGCTGCCGGTATCCTGGGTGGTCTGGAT
GACATCTACATGCGCCCTGGCTCCAAGGTCCTGTATCTCGGTTCCGCCAG
CGGTACCTCCGTCAGTCACGTTGCCGATATCGTCGGACCTACTGGTAACG
TCTACGCTGTTGAGTTCTCCCACCGTTCCGGCCGTGACTTGATCGGCATG
GCTACCCACCGCACCAACGTTATCCCCATCGTCGAGGACGCCAGACACCC
TCTTCGTTACCGTATGCTCGTCCCCATGGTCGATGTCATCTTCGCCGATG
TTGCCCAGCCCGACCAGGCCCGTATTGTCGGCCTGAACGCCCACATGTTC
CTCAAGGAGGGCGGTGGTGTCATTGTCTCCGTCAAGGCCAACTGTATCGA
CAGTACCGCTAAGCCCGAGGTTGTGTTCGCTCGTGAAGTCCAGAAGATGA
GAGAGGAGCGGATCAAGCCCAGGGAACAGCTGACCCTGGAGCCTTTCGAA
CGTGACCACTGTATAGTGTCTGGTATCTACAAGCGCTCTGCATGAGCGGT
CTTGGTGCCGGTGGTCGTGGTCGCGGCGGTGGCCGTGGTGCTCCCCGCGG
TGGTCGTGGTGCCCCCCGTGGCCGTGGTGGTCCTCGCGGCGGTGGTCGCG
GCGGTGCTAAGGGTGCCAAGGGTGGTGCTAAGGTCATCATTATGGCATTC
GGTGGTCCTCGTGGTGGTGGCCGTGGTGGTGGCCGTGGTGCTCCTCGTGG
AGGTGGTGGCGGCCGTGGTGGTAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP1ASPNIDRAFT_196062Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196062-T1ASPNIDRAFT_196062-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196062-T1.cdsASPNIDRAFT_196062-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196062-T1.utr3p1ASPNIDRAFT_196062-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196062-T1.exon3ASPNIDRAFT_196062-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196062-T1.exon2ASPNIDRAFT_196062-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196062-T1.exon1ASPNIDRAFT_196062-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196062-T1.utr5p1ASPNIDRAFT_196062-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092648VW
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR000692
DBxrefPFAM:PF01269
ProductSmall subunit processome complex component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3023395..3025108 -
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