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ASPNIDRAFT_35550-T1, ASPNIDRAFT_35550-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_35550-T1
Unique NameASPNIDRAFT_35550-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3130449..3131419-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_35550-T1 ID=ASPNIDRAFT_35550-T1|Name=ASPNIDRAFT_35550-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=971bp|location=Sequence derived from alignment at ACJE01000004.1:3130449..3131419- (Aspergillus niger ATCC 1015)
ATGTCCTCCATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGG
TCAGCTCGAAGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGTAC
ATACATACCTTCACTTTCTTGCCATAGCCCCCCATTGCCGAAGTATTCTG
CAGTACTAATAGAAATGAAATCTTAGGATTACTCCCTCCGCGCGAAAGAC
TACAACACGAAGAAAGAGAAAATTAAGCGCCTCCAAGAAAAAGTCCGCGA
CCGCAACCCCGATGAATTCGCCTTCGGAATGATGTCGAGTTCGTCCGCTC
GACAAGGCAAACACGGCGCTGCGGGAAACCGCGACTCGGCTGCCGCGCGC
GGTCTCAGCCACGATGCCATTAAGTTGCTCAAGACACAGGATGCGGGGTA
CCTGCGGACAGTTGGGGAGCGGATCCGACGACAGATGGAGAAGTTGGAGG
AGGAGGTGCGGTTGCAGGATGGGATGAAGGAGATCCTGGATGGGGATGCT
GGGGAGGATAAGAAGAAAGAGGAGGACGTGATGGATGACGATGATATGGA
CTTTGATTTCGATTTCGGGGATGATGAGGTGGATCAGAAGAAGAATAAGA
AGAGCAGGAAATTGGTGTTTGCGGATGATCGGAAGGAGCAGAGGGTGTTG
AGGAAGAAGAAGTTACGTGAGGAAGAAGAAGATGATGATGATGAGGAAGA
GGATGATTCGTTCGGAAAGCAGGTGATGAAAAAGTCGAGGAAGCAGTTGG
AGGCGGAGAGACAGGCGCTTGTGGAGGCTCGTCGGGCTCGCAAAATGAAG
AAGCGTGCGGCAGAGGCGCGGATGAACAAGCTCAAGGCGCTGCAGAAGCA
GTACAAGGAGATCACGGCCGCGGAGCGCGAGCTGGATTGGCAGCGTGGTC
GGATGGATAATGTGGTGGGTGGCACGAATAAGAATGGTGTCAAGTGGAAG
ATCCGTGAGCGGAAGAAGTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:3130449..3131419-

>ASPNIDRAFT_35550-T1 ID=ASPNIDRAFT_35550-T1|Name=ASPNIDRAFT_35550-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1782bp|location=Sequence derived from alignment at ACJE01000004.1:3130449..3131419- (Aspergillus niger ATCC 1015)
GATTACTCCCTCCGCGCGAAAGACTACAACACGAAGAAAGAGAAAATTAA
GCGCCTCCAAGAAAAAGTCCGCGACCGCAACCCCGATGAATTCGCCTTCG
GAATGATGTCGAGTTCGTCCGCTCGACAAGGCAAACACGGCGCTGCGGGA
AACCGCGACTCGGCTGCCGCGCGCGGTCTCAGCCACGATGCCATTAAGTT
GCTCAAGACACAGGATGCGGGGTACCTGCGGACAGTTGGGGAGCGGATCC
GACGACAGATGGAGAAGTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATG
AAGGAGATCCTGGATGGGGATGCTGGGGAGGATAAGAAGAAAGAGGAGGA
CGTGATGGATGACGATGATATGGACTTTGATTTCGATTTCGGGGATGATG
AGGTGGATCAGAAGAAGAATAAGAAGAGCAGGAAATTGGTGTTTGCGGAT
GATCGGAAGGAGCAGAGGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGA
AGAAGATGATGATGATGAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGA
TGAAAAAGTCGAGGAAGCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAG
GCTCGTCGGGCTCGCAAAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAA
CAAGCTCAAGGCGCTGCAGAAGCAGTACAAGGAGATCACGGCCGCGGAGC
GCGAGCTGGATTGGCAGCGTGGTCGGATGGATAATGTGGTGGGTGGCACG
AATAAGAATGGTGTCAAGTGGAAGATCCGTGAGCGGAAGAAGTGAATGTC
CTCCATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGGTCAGC
TCGAAGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGATTACTCC
CTCCGCGCGAAAGACTACAACACGAAGAAAGAGAAAATTAAGCGCCTCCA
AGAAAAAGTCCGCGACCGCAACCCCGATGAATTCGCCTTCGGAATGATGT
CGAGTTCGTCCGCTCGACAAGGCAAACACGGCGCTGCGGGAAACCGCGAC
TCGGCTGCCGCGCGCGGTCTCAGCCACGATGCCATTAAGTTGCTCAAGAC
ACAGGATGCGGGGTACCTGCGGACAGTTGGGGAGCGGATCCGACGACAGA
TGGAGAAGTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATGAAGGAGATC
CTGGATGGGGATGCTGGGGAGGATAAGAAGAAAGAGGAGGACGTGATGGA
TGACGATGATATGGACTTTGATTTCGATTTCGGGGATGATGAGGTGGATC
AGAAGAAGAATAAGAAGAGCAGGAAATTGGTGTTTGCGGATGATCGGAAG
GAGCAGAGGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGAAGAAGATGA
TGATGATGAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGATGAAAAAGT
CGAGGAAGCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAGGCTCGTCGG
GCTCGCAAAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAACAAGCTCAA
GGCGCTGCAGAAGCAGTACAAGGAGATCACGGCCGCGGAGCGCGAGCTGG
ATTGGCAGCGTGGTCGGATGGATAATGTGGTGGGTGGCACGAATAAGAAT
GGTGTCAAGTGGAAGATCCGTGAGCGGAAGAAGTGAATGTCCTCCATGCG
CAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGGTCAGCTCGAAGGCC
GTGAGAAATGGGGTATTCTCGAAAAGCACAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35550ASPNIDRAFT_35550Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35550-T1ASPNIDRAFT_35550-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35550-T1.cdsASPNIDRAFT_35550-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35550-T1.exon2ASPNIDRAFT_35550-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_35550-T1.exon1ASPNIDRAFT_35550-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09264CA0
DBxrefInterPro:IPR007144
DBxrefPFAM:PF03998
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3130449..3131419 -
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