You are here

Home

ASPNIDRAFT_46267-T1, ASPNIDRAFT_46267-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46267-T1
Unique NameASPNIDRAFT_46267-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3542095..3543982-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46267-T1 ID=ASPNIDRAFT_46267-T1|Name=ASPNIDRAFT_46267-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1888bp|location=Sequence derived from alignment at ACJE01000004.1:3542095..3543982- (Aspergillus niger ATCC 1015)
ATGTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCACAGCTGCTCCGCC
ATCTCAAGACCCTCCCCGTTCCCAGGACCGCGATGACCGCTCCTCCAAAA
CTGACAGTAACGAACGCCGGGACCGTGATCGGTCACGAGAGAAGGACCGC
AAGCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGCGAGATATCGATGG
AGATGAAGACATGAAGAGCCCGAGAAGCGAACATGGCAGTGCTAACGGAA
GCCATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAGCGAACGCCGTCGG
TCTCGTCGTGACCGTTACGGTGACGAATACCGTTCTGGTGGCGACTTCTA
CCGCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCGCCTTACGATGATC
GCTATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGAGCGAGATGAAGAT
AGACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCCCGAGAAGCCGCGA
GAGGACCCCGGAGCCTACTGAGGATGAGCGTGACAGGCGTACCATTTTCG
TTCAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCTGATTGCGTTCTTT
GAGAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTAAGGACCGTGTCAG
TGGACGGTCTAAAGGGTGAGTTCCCTGCGTTTCCATATGACAGGAGAGCT
GTGTACTAACTTTCACTAGTGTCGGTTATGTCGAGTTCAAAAGCGAAGAC
TCCGTTGCGCCCGCTATCCAGCTTACCGGACAGAAACTTCTAGGAATTCC
CATAATCGCCCAACTGACTGAAGCGGAAAAGAACCGCCAGGCCCGCAATC
CCGAGGCCAGCAGCGGCAACAATCACGCTGCTCCATTTCACAGGTTGTAC
GTGGGTAACATTCATTTCAGCATCACTGAAAGTGACCTTCAGAACGTCTT
TGAGCCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGAAGGATGAGACTG
GTCGTAGCAGGGGTTATGGATTCGTGCAGTGAGTGTTACCCCTATACAAT
TTCCCTTCATGATTAGTAACTGTTGCTAATACCGTGTATAGGTTCCGTGA
TCCAAACCAGGCTCGTGAGGCTTTGGAAAAGATGAATGGATTTGACCTTG
CTGGTCGAGCAATCCGCGTTGGCCTTGGCAACGATAAGTTCACTCCTGAC
TCGAACGCACAACGCATGCAGAGCCAAGGTGCAAACCAACATAACTTCCA
GGGCTCTCTCTTCTCGGGTCACGGAGGACGTGGTGTTCAAGCCGGCGGTA
CCAGCAACTTCGACCGCGCTGGTGGCCGTGACTCCGAAAAGGGGGCCGGC
GCTAGTGCATTGGACGATACGGATGTTGCCGGCGTAAATTTCAACAACTA
CAGTAGGGATGCATTGATGCGCAAGCTTGCAAGAACAGATGAACCATCCG
AGCCTGCTGCCGATGACCAGCAGAAGGTGCTCCGTCCCAAGACTGAGGCT
AAGCCTCTGCCTGTTAACGTCAACATGGCAAGTCGGTGTGTCATGCTCCG
CAACATGTTTGACCCCAACGAGTAAGTTGCTCAATCATAGCTATCTGTCT
TCTCTATACAGAATCTAACAATATCGCAGGGAGGAGGGTGAAGCTTGGAT
TAAGGAGCTGGAGGATGACGTTCGCGCTGAGTGCGAAGACAAATATGGCC
ATGTTGTTCACATTGCACTAGATCCCAACTCGCAAGGCGATATTTACCTG
AAGTTCGACCGCGTCCAGGGTGGCGAGAACGCCATCAAGGGCCTGAACGG
GCGTTTCTTTGGTGGTCGACAGATCACCGCCCAGCCCGTCGTCGACGCTG
TCTACAGCAGTCTGTTCTCCCGAACCAAAGCGATCTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:3542095..3543982-

>ASPNIDRAFT_46267-T1 ID=ASPNIDRAFT_46267-T1|Name=ASPNIDRAFT_46267-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6852bp|location=Sequence derived from alignment at ACJE01000004.1:3542095..3543982- (Aspergillus niger ATCC 1015)
GGAGGAGGGTGAAGCTTGGATTAAGGAGCTGGAGGATGACGTTCGCGCTG
AGTGCGAAGACAAATATGGCCATGTTGTTCACATTGCACTAGATCCCAAC
TCGCAAGGCGATATTTACCTGAAGTTCGACCGCGTCCAGGGTGGCGAGAA
CGCCATCAAGGGCCTGAACGGGCGTTTCTTTGGTGGTCGACAGATCACCG
CCCAGCCCGTCGTCGACGCTGTCTACAGCAGTCTGTTCTCCCGAACCAAA
GCGATCTAAGTTCCGTGATCCAAACCAGGCTCGTGAGGCTTTGGAAAAGA
TGAATGGATTTGACCTTGCTGGTCGAGCAATCCGCGTTGGCCTTGGCAAC
GATAAGTTCACTCCTGACTCGAACGCACAACGCATGCAGAGCCAAGGTGC
AAACCAACATAACTTCCAGGGCTCTCTCTTCTCGGGTCACGGAGGACGTG
GTGTTCAAGCCGGCGGTACCAGCAACTTCGACCGCGCTGGTGGCCGTGAC
TCCGAAAAGGGGGCCGGCGCTAGTGCATTGGACGATACGGATGTTGCCGG
CGTAAATTTCAACAACTACAGTAGGGATGCATTGATGCGCAAGCTTGCAA
GAACAGATGAACCATCCGAGCCTGCTGCCGATGACCAGCAGAAGGTGCTC
CGTCCCAAGACTGAGGCTAAGCCTCTGCCTGTTAACGTCAACATGGCAAG
TCGGTGTGTCATGCTCCGCAACATGTTTGACCCCAACGATGTCGGTTATG
TCGAGTTCAAAAGCGAAGACTCCGTTGCGCCCGCTATCCAGCTTACCGGA
CAGAAACTTCTAGGAATTCCCATAATCGCCCAACTGACTGAAGCGGAAAA
GAACCGCCAGGCCCGCAATCCCGAGGCCAGCAGCGGCAACAATCACGCTG
CTCCATTTCACAGGTTGTACGTGGGTAACATTCATTTCAGCATCACTGAA
AGTGACCTTCAGAACGTCTTTGAGCCTTTTGGCGAACTCGAATTTGTCCA
GCTGCAGAAGGATGAGACTGGTCGTAGCAGGGGTTATGGATTCGTGCAAT
GTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCACAGCTGCTCCGCCAT
CTCAAGACCCTCCCCGTTCCCAGGACCGCGATGACCGCTCCTCCAAAACT
GACAGTAACGAACGCCGGGACCGTGATCGGTCACGAGAGAAGGACCGCAA
GCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGCGAGATATCGATGGAG
ATGAAGACATGAAGAGCCCGAGAAGCGAACATGGCAGTGCTAACGGAAGC
CATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAGCGAACGCCGTCGGTC
TCGTCGTGACCGTTACGGTGACGAATACCGTTCTGGTGGCGACTTCTACC
GCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCGCCTTACGATGATCGC
TATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGAGCGAGATGAAGATAG
ACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCCCGAGAAGCCGCGAGA
GGACCCCGGAGCCTACTGAGGATGAGCGTGACAGGCGTACCATTTTCGTT
CAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCTGATTGCGTTCTTTGA
GAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTAAGGACCGTGTCAGTG
GACGGTCTAAAGGGGAGGAGGGTGAAGCTTGGATTAAGGAGCTGGAGGAT
GACGTTCGCGCTGAGTGCGAAGACAAATATGGCCATGTTGTTCACATTGC
ACTAGATCCCAACTCGCAAGGCGATATTTACCTGAAGTTCGACCGCGTCC
AGGGTGGCGAGAACGCCATCAAGGGCCTGAACGGGCGTTTCTTTGGTGGT
CGACAGATCACCGCCCAGCCCGTCGTCGACGCTGTCTACAGCAGTCTGTT
CTCCCGAACCAAAGCGATCTAAGTTCCGTGATCCAAACCAGGCTCGTGAG
GCTTTGGAAAAGATGAATGGATTTGACCTTGCTGGTCGAGCAATCCGCGT
TGGCCTTGGCAACGATAAGTTCACTCCTGACTCGAACGCACAACGCATGC
AGAGCCAAGGTGCAAACCAACATAACTTCCAGGGCTCTCTCTTCTCGGGT
CACGGAGGACGTGGTGTTCAAGCCGGCGGTACCAGCAACTTCGACCGCGC
TGGTGGCCGTGACTCCGAAAAGGGGGCCGGCGCTAGTGCATTGGACGATA
CGGATGTTGCCGGCGTAAATTTCAACAACTACAGTAGGGATGCATTGATG
CGCAAGCTTGCAAGAACAGATGAACCATCCGAGCCTGCTGCCGATGACCA
GCAGAAGGTGCTCCGTCCCAAGACTGAGGCTAAGCCTCTGCCTGTTAACG
TCAACATGGCAAGTCGGTGTGTCATGCTCCGCAACATGTTTGACCCCAAC
GATGTCGGTTATGTCGAGTTCAAAAGCGAAGACTCCGTTGCGCCCGCTAT
CCAGCTTACCGGACAGAAACTTCTAGGAATTCCCATAATCGCCCAACTGA
CTGAAGCGGAAAAGAACCGCCAGGCCCGCAATCCCGAGGCCAGCAGCGGC
AACAATCACGCTGCTCCATTTCACAGGTTGTACGTGGGTAACATTCATTT
CAGCATCACTGAAAGTGACCTTCAGAACGTCTTTGAGCCTTTTGGCGAAC
TCGAATTTGTCCAGCTGCAGAAGGATGAGACTGGTCGTAGCAGGGGTTAT
GGATTCGTGCAATGTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCACA
GCTGCTCCGCCATCTCAAGACCCTCCCCGTTCCCAGGACCGCGATGACCG
CTCCTCCAAAACTGACAGTAACGAACGCCGGGACCGTGATCGGTCACGAG
AGAAGGACCGCAAGCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGCGA
GATATCGATGGAGATGAAGACATGAAGAGCCCGAGAAGCGAACATGGCAG
TGCTAACGGAAGCCATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAGCG
AACGCCGTCGGTCTCGTCGTGACCGTTACGGTGACGAATACCGTTCTGGT
GGCGACTTCTACCGCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCGCC
TTACGATGATCGCTATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGAGC
GAGATGAAGATAGACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCCCG
AGAAGCCGCGAGAGGACCCCGGAGCCTACTGAGGATGAGCGTGACAGGCG
TACCATTTTCGTTCAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCTGA
TTGCGTTCTTTGAGAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTAAG
GACCGTGTCAGTGGACGGTCTAAAGGGGAGGAGGGTGAAGCTTGGATTAA
GGAGCTGGAGGATGACGTTCGCGCTGAGTGCGAAGACAAATATGGCCATG
TTGTTCACATTGCACTAGATCCCAACTCGCAAGGCGATATTTACCTGAAG
TTCGACCGCGTCCAGGGTGGCGAGAACGCCATCAAGGGCCTGAACGGGCG
TTTCTTTGGTGGTCGACAGATCACCGCCCAGCCCGTCGTCGACGCTGTCT
ACAGCAGTCTGTTCTCCCGAACCAAAGCGATCTAAGTTCCGTGATCCAAA
CCAGGCTCGTGAGGCTTTGGAAAAGATGAATGGATTTGACCTTGCTGGTC
GAGCAATCCGCGTTGGCCTTGGCAACGATAAGTTCACTCCTGACTCGAAC
GCACAACGCATGCAGAGCCAAGGTGCAAACCAACATAACTTCCAGGGCTC
TCTCTTCTCGGGTCACGGAGGACGTGGTGTTCAAGCCGGCGGTACCAGCA
ACTTCGACCGCGCTGGTGGCCGTGACTCCGAAAAGGGGGCCGGCGCTAGT
GCATTGGACGATACGGATGTTGCCGGCGTAAATTTCAACAACTACAGTAG
GGATGCATTGATGCGCAAGCTTGCAAGAACAGATGAACCATCCGAGCCTG
CTGCCGATGACCAGCAGAAGGTGCTCCGTCCCAAGACTGAGGCTAAGCCT
CTGCCTGTTAACGTCAACATGGCAAGTCGGTGTGTCATGCTCCGCAACAT
GTTTGACCCCAACGATGTCGGTTATGTCGAGTTCAAAAGCGAAGACTCCG
TTGCGCCCGCTATCCAGCTTACCGGACAGAAACTTCTAGGAATTCCCATA
ATCGCCCAACTGACTGAAGCGGAAAAGAACCGCCAGGCCCGCAATCCCGA
GGCCAGCAGCGGCAACAATCACGCTGCTCCATTTCACAGGTTGTACGTGG
GTAACATTCATTTCAGCATCACTGAAAGTGACCTTCAGAACGTCTTTGAG
CCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGAAGGATGAGACTGGTCG
TAGCAGGGGTTATGGATTCGTGCAATGTCAGGTCTCGATGTTGAGGCTCT
CCTTGAGTCCACAGCTGCTCCGCCATCTCAAGACCCTCCCCGTTCCCAGG
ACCGCGATGACCGCTCCTCCAAAACTGACAGTAACGAACGCCGGGACCGT
GATCGGTCACGAGAGAAGGACCGCAAGCGCAGGGACCGCAGCCGTGATCG
ACGTCGCTCGCGAGATATCGATGGAGATGAAGACATGAAGAGCCCGAGAA
GCGAACATGGCAGTGCTAACGGAAGCCATAGAAGCAGAAAGAGGAGCAGG
AGTCGTGATAGCGAACGCCGTCGGTCTCGTCGTGACCGTTACGGTGACGA
ATACCGTTCTGGTGGCGACTTCTACCGCGGTGGTGGACGGGCTCGCACTC
GCTCTCGGTCGCCTTACGATGATCGCTATTACCGCCCCTCGGGCCGCTCC
CGTCGCGATGAGCGAGATGAAGATAGACGCACTCGCCGTGACCGCAAACG
AAGCCCGAGCCCGAGAAGCCGCGAGAGGACCCCGGAGCCTACTGAGGATG
AGCGTGACAGGCGTACCATTTTCGTTCAGCAGCTTGCTGCGCGGTTGAGA
ACTAAGGAGCTGATTGCGTTCTTTGAGAAAGTCGGACCTGTCAAGGAAGC
CCAGATCGTTAAGGACCGTGTCAGTGGACGGTCTAAAGGGGAGGAGGGTG
AAGCTTGGATTAAGGAGCTGGAGGATGACGTTCGCGCTGAGTGCGAAGAC
AAATATGGCCATGTTGTTCACATTGCACTAGATCCCAACTCGCAAGGCGA
TATTTACCTGAAGTTCGACCGCGTCCAGGGTGGCGAGAACGCCATCAAGG
GCCTGAACGGGCGTTTCTTTGGTGGTCGACAGATCACCGCCCAGCCCGTC
GTCGACGCTGTCTACAGCAGTCTGTTCTCCCGAACCAAAGCGATCTAAGT
TCCGTGATCCAAACCAGGCTCGTGAGGCTTTGGAAAAGATGAATGGATTT
GACCTTGCTGGTCGAGCAATCCGCGTTGGCCTTGGCAACGATAAGTTCAC
TCCTGACTCGAACGCACAACGCATGCAGAGCCAAGGTGCAAACCAACATA
ACTTCCAGGGCTCTCTCTTCTCGGGTCACGGAGGACGTGGTGTTCAAGCC
GGCGGTACCAGCAACTTCGACCGCGCTGGTGGCCGTGACTCCGAAAAGGG
GGCCGGCGCTAGTGCATTGGACGATACGGATGTTGCCGGCGTAAATTTCA
ACAACTACAGTAGGGATGCATTGATGCGCAAGCTTGCAAGAACAGATGAA
CCATCCGAGCCTGCTGCCGATGACCAGCAGAAGGTGCTCCGTCCCAAGAC
TGAGGCTAAGCCTCTGCCTGTTAACGTCAACATGGCAAGTCGGTGTGTCA
TGCTCCGCAACATGTTTGACCCCAACGATGTCGGTTATGTCGAGTTCAAA
AGCGAAGACTCCGTTGCGCCCGCTATCCAGCTTACCGGACAGAAACTTCT
AGGAATTCCCATAATCGCCCAACTGACTGAAGCGGAAAAGAACCGCCAGG
CCCGCAATCCCGAGGCCAGCAGCGGCAACAATCACGCTGCTCCATTTCAC
AGGTTGTACGTGGGTAACATTCATTTCAGCATCACTGAAAGTGACCTTCA
GAACGTCTTTGAGCCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGAAGG
ATGAGACTGGTCGTAGCAGGGGTTATGGATTCGTGCAATGTCAGGTCTCG
ATGTTGAGGCTCTCCTTGAGTCCACAGCTGCTCCGCCATCTCAAGACCCT
CCCCGTTCCCAGGACCGCGATGACCGCTCCTCCAAAACTGACAGTAACGA
ACGCCGGGACCGTGATCGGTCACGAGAGAAGGACCGCAAGCGCAGGGACC
GCAGCCGTGATCGACGTCGCTCGCGAGATATCGATGGAGATGAAGACATG
AAGAGCCCGAGAAGCGAACATGGCAGTGCTAACGGAAGCCATAGAAGCAG
AAAGAGGAGCAGGAGTCGTGATAGCGAACGCCGTCGGTCTCGTCGTGACC
GTTACGGTGACGAATACCGTTCTGGTGGCGACTTCTACCGCGGTGGTGGA
CGGGCTCGCACTCGCTCTCGGTCGCCTTACGATGATCGCTATTACCGCCC
CTCGGGCCGCTCCCGTCGCGATGAGCGAGATGAAGATAGACGCACTCGCC
GTGACCGCAAACGAAGCCCGAGCCCGAGAAGCCGCGAGAGGACCCCGGAG
CCTACTGAGGATGAGCGTGACAGGCGTACCATTTTCGTTCAGCAGCTTGC
TGCGCGGTTGAGAACTAAGGAGCTGATTGCGTTCTTTGAGAAAGTCGGAC
CTGTCAAGGAAGCCCAGATCGTTAAGGACCGTGTCAGTGGACGGTCTAAA
GG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46267ASPNIDRAFT_46267Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46267-T1ASPNIDRAFT_46267-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46267-T1.cdsASPNIDRAFT_46267-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46267-T1.exon4ASPNIDRAFT_46267-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46267-T1.exon3ASPNIDRAFT_46267-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46267-T1.exon2ASPNIDRAFT_46267-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46267-T1.exon1ASPNIDRAFT_46267-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR029123
DBxrefInterPro:IPR006509
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF15519
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3542095..3543982 -
Powered by Drupal