You are here

Home

ASPNIDRAFT_171575-T1, ASPNIDRAFT_171575-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_171575-T1
Unique NameASPNIDRAFT_171575-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3743700..3744956+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_171575-T1 ID=ASPNIDRAFT_171575-T1|Name=ASPNIDRAFT_171575-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1257bp|location=Sequence derived from alignment at ACJE01000004.1:3743700..3744956+ (Aspergillus niger ATCC 1015)
ATGTCCGCACCAACTGACGCCACTCCGGCATCCAATGTTCTTGGCACCAT
CGGCACCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTATAACT
GGCGACGGAAAAAGACAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGG
GCTGTTTGTATGGACTAACTACCTCCCTCCCCCCTCCCCGGTGATGGTGA
TATATATATAGCACAAGTGTACTTGTAGTATCCGCGATTGGTACCGTGCC
AAAGACAGGAGTGCCACAGTTAGTAATATTGAACGAAATCCTATCAGGTG
CTGTGCCCATGGGTGTGTATTTGATCCTACAGGTAAACGTCATCCTTCAC
TTTGCCCGTCAGGTTCTGGTCATGACTCGGAAAGTCGAGGTGCTTACTAT
CATGAATGCCAGGAAGTCAATCTCCCTATGCAAATCCAGCCGCAGATATT
CGGGACATTTTCGGCCATCATTTGGGCTCAGATTTTACATTATGATCAGT
TAGACCTACTCTTTTTGTTCCCAGTCCTGGAAATATCTTTGCTCAAGATG
TATCGATGTCGATATACTAACAAGCGTGACAGCAATTATACCACTCGGAA
GGCCACATTGGCGTGTGTTGGGTTATTGGCAGTTATGGGTGGGCTCGAAG
CCCTACTCATCTTAACTTTGAGGGCATGATGACCGTTCTACCCGTTCATT
ACAATCTTGCGTACTAACTCGGCCCTGGTCGCAGATACCATACAATAAAG
GCATCACCTGGCCGGATATCTTGGTTGGTGCGATAGCAACAGTGCTTCTC
GCCGGCGGAATGTTACCCATTTATTTTGAATTGGGGAAAAGACAAGGCCG
AGTAATTGGAATCAGTACGTGTTGTTCCTGTTTCTCGTGGGCGAGAGAGC
GAATTCTCATCGACATAGATTGGGTCTTCTTGTGCATCGACACGCTGGGA
GGACTGTTCTCAATCTTTGCGCTTGGTATGGCCGTTACATCCCTCCCCGT
ACGACATGCTAACGGACTCCAACAGTGGCACAAGGGTCGTTTGATATCCT
TGGCGGGGTTATGTATATTGTTGTGTGAGTCCAATCCTTGCCTCGCCGTA
CATGCTGAGTGTCTAACCCATAAATAGCGTGGTACTCGAGCTGGGAATCT
ACCTCAGCCACATCATATGGCGCATCCGATTCCGGGAGGCCCGGAAAGAA
GCCAAACATTCGGGTAGAAGTGTCGAGGATATTCTCCAAATGTCTAATCC
CGCGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:3743700..3744956+

>ASPNIDRAFT_171575-T1 ID=ASPNIDRAFT_171575-T1|Name=ASPNIDRAFT_171575-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5880bp|location=Sequence derived from alignment at ACJE01000004.1:3743700..3744956+ (Aspergillus niger ATCC 1015)
ATGTCCGCACCAACTGACGCCACTCCGGCATCCAATGTTCTTGGCACCAT
CGGCACCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTATAACT
GGCGACGGAAAAAGACAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGG
GCTGTTTGTGCTGTGCCCATGGGTGTGTATTTGATCCTACAGGAAGTCAA
TCTCCCTATGCAAATCCAGCCGCAGATATTCGGGACATTTTCGGCCATCA
TTTGGGCTCAGATTTTACATTATGATCAGTTAGACCTACTCTTTTTGTTC
CCAGTCCTGGAAATATCTTTGCTCAAGATCGTGACAGCAATTATACCACT
CGGAAGGCCACATTGGCGTATACCATACAATAAAGGCATCACCTGGCCGG
ATATCTTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGAATGTTA
CCCATTTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAATTGGAATCAA
TTGGGTCTTCTTGTGCATCGACACGCTGGGAGGACTGTTCTCAATCTTTG
CGCTTGTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGTTATGTATATT
GTTGTCGTGGTACTCGAGCTGGGAATCTACCTCAGCCACATCATATGGCG
CATCCGATTCCGGGAGGCCCGGAAAGAAGCCAAACATTCGGGTAGAAGTG
TCGAGGATATTCTCCAAATGTCTAATCCCGCGTGAATGTCCGCACCAACT
GACGCCACTCCGGCATCCAATGTTCTTGGCACCATCGGCACCGTATTCTG
GTGTATCCAGCTTGTCCCCCAGATATGGTATAACTGGCGACGGAAAAAGA
CAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGGGCTGTTTGTGCTGTG
CCCATGGGTGTGTATTTGATCCTACAGGAAGTCAATCTCCCTATGCAAAT
CCAGCCGCAGATATTCGGGACATTTTCGGCCATCATTTGGGCTCAGATTT
TACATTATGATCAGTTAGACCTACTCTTTTTGTTCCCAGTCCTGGAAATA
TCTTTGCTCAAGATCGTGACAGCAATTATACCACTCGGAAGGCCACATTG
GCGTATACCATACAATAAAGGCATCACCTGGCCGGATATCTTGGTTGGTG
CGATAGCAACAGTGCTTCTCGCCGGCGGAATGTTACCCATTTATTTTGAA
TTGGGGAAAAGACAAGGCCGAGTAATTGGAATCAATTGGGTCTTCTTGTG
CATCGACACGCTGGGAGGACTGTTCTCAATCTTTGCGCTTGTGGCACAAG
GGTCGTTTGATATCCTTGGCGGGGTTATGTATATTGTTGTCGTGGTACTC
GAGCTGGGAATCTACCTCAGCCACATCATATGGCGCATCCGATTCCGGGA
GGCCCGGAAAGAAGCCAAACATTCGGGTAGAAGTGTCGAGGATATTCTCC
AAATGTCTAATCCCGCGTGAATGTCCGCACCAACTGACGCCACTCCGGCA
TCCAATGTTCTTGGCACCATCGGCACCGTATTCTGGTGTATCCAGCTTGT
CCCCCAGATATGGTATAACTGGCGACGGAAAAAGACAGAAGGATTACCTC
CTGCAATGGGGTTCTTGTGGGCTGTTTGTGCTGTGCCCATGGGTGTGTAT
TTGATCCTACAGGAAGTCAATCTCCCTATGCAAATCCAGCCGCAGATATT
CGGGACATTTTCGGCCATCATTTGGGCTCAGATTTTACATTATGATCAGT
TAGACCTACTCTTTTTGTTCCCAGTCCTGGAAATATCTTTGCTCAAGATC
GTGACAGCAATTATACCACTCGGAAGGCCACATTGGCGTATACCATACAA
TAAAGGCATCACCTGGCCGGATATCTTGGTTGGTGCGATAGCAACAGTGC
TTCTCGCCGGCGGAATGTTACCCATTTATTTTGAATTGGGGAAAAGACAA
GGCCGAGTAATTGGAATCAATTGGGTCTTCTTGTGCATCGACACGCTGGG
AGGACTGTTCTCAATCTTTGCGCTTGTGGCACAAGGGTCGTTTGATATCC
TTGGCGGGGTTATGTATATTGTTGTCGTGGTACTCGAGCTGGGAATCTAC
CTCAGCCACATCATATGGCGCATCCGATTCCGGGAGGCCCGGAAAGAAGC
CAAACATTCGGGTAGAAGTGTCGAGGATATTCTCCAAATGTCTAATCCCG
CGTGAATGTCCGCACCAACTGACGCCACTCCGGCATCCAATGTTCTTGGC
ACCATCGGCACCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTA
TAACTGGCGACGGAAAAAGACAGAAGGATTACCTCCTGCAATGGGGTTCT
TGTGGGCTGTTTGTGCTGTGCCCATGGGTGTGTATTTGATCCTACAGGAA
GTCAATCTCCCTATGCAAATCCAGCCGCAGATATTCGGGACATTTTCGGC
CATCATTTGGGCTCAGATTTTACATTATGATCAGTTAGACCTACTCTTTT
TGTTCCCAGTCCTGGAAATATCTTTGCTCAAGATCGTGACAGCAATTATA
CCACTCGGAAGGCCACATTGGCGTATACCATACAATAAAGGCATCACCTG
GCCGGATATCTTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGAA
TGTTACCCATTTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAATTGGA
ATCAATTGGGTCTTCTTGTGCATCGACACGCTGGGAGGACTGTTCTCAAT
CTTTGCGCTTGTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGTTATGT
ATATTGTTGTCGTGGTACTCGAGCTGGGAATCTACCTCAGCCACATCATA
TGGCGCATCCGATTCCGGGAGGCCCGGAAAGAAGCCAAACATTCGGGTAG
AAGTGTCGAGGATATTCTCCAAATGTCTAATCCCGCGTGAATGTCCGCAC
CAACTGACGCCACTCCGGCATCCAATGTTCTTGGCACCATCGGCACCGTA
TTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTATAACTGGCGACGGAA
AAAGACAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGGGCTGTTTGTG
CTGTGCCCATGGGTGTGTATTTGATCCTACAGGAAGTCAATCTCCCTATG
CAAATCCAGCCGCAGATATTCGGGACATTTTCGGCCATCATTTGGGCTCA
GATTTTACATTATGATCAGTTAGACCTACTCTTTTTGTTCCCAGTCCTGG
AAATATCTTTGCTCAAGATCGTGACAGCAATTATACCACTCGGAAGGCCA
CATTGGCGTATACCATACAATAAAGGCATCACCTGGCCGGATATCTTGGT
TGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGAATGTTACCCATTTATT
TTGAATTGGGGAAAAGACAAGGCCGAGTAATTGGAATCAATTGGGTCTTC
TTGTGCATCGACACGCTGGGAGGACTGTTCTCAATCTTTGCGCTTGTGGC
ACAAGGGTCGTTTGATATCCTTGGCGGGGTTATGTATATTGTTGTCGTGG
TACTCGAGCTGGGAATCTACCTCAGCCACATCATATGGCGCATCCGATTC
CGGGAGGCCCGGAAAGAAGCCAAACATTCGGGTAGAAGTGTCGAGGATAT
TCTCCAAATGTCTAATCCCGCGTGAATGTCCGCACCAACTGACGCCACTC
CGGCATCCAATGTTCTTGGCACCATCGGCACCGTATTCTGGTGTATCCAG
CTTGTCCCCCAGATATGGTATAACTGGCGACGGAAAAAGACAGAAGGATT
ACCTCCTGCAATGGGGTTCTTGTGGGCTGTTTGTGCTGTGCCCATGGGTG
TGTATTTGATCCTACAGGAAGTCAATCTCCCTATGCAAATCCAGCCGCAG
ATATTCGGGACATTTTCGGCCATCATTTGGGCTCAGATTTTACATTATGA
TCAGTTAGACCTACTCTTTTTGTTCCCAGTCCTGGAAATATCTTTGCTCA
AGATCGTGACAGCAATTATACCACTCGGAAGGCCACATTGGCGTATACCA
TACAATAAAGGCATCACCTGGCCGGATATCTTGGTTGGTGCGATAGCAAC
AGTGCTTCTCGCCGGCGGAATGTTACCCATTTATTTTGAATTGGGGAAAA
GACAAGGCCGAGTAATTGGAATCAATTGGGTCTTCTTGTGCATCGACACG
CTGGGAGGACTGTTCTCAATCTTTGCGCTTGTGGCACAAGGGTCGTTTGA
TATCCTTGGCGGGGTTATGTATATTGTTGTCGTGGTACTCGAGCTGGGAA
TCTACCTCAGCCACATCATATGGCGCATCCGATTCCGGGAGGCCCGGAAA
GAAGCCAAACATTCGGGTAGAAGTGTCGAGGATATTCTCCAAATGTCTAA
TCCCGCGTGAATGTCCGCACCAACTGACGCCACTCCGGCATCCAATGTTC
TTGGCACCATCGGCACCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATA
TGGTATAACTGGCGACGGAAAAAGACAGAAGGATTACCTCCTGCAATGGG
GTTCTTGTGGGCTGTTTGTGCTGTGCCCATGGGTGTGTATTTGATCCTAC
AGGAAGTCAATCTCCCTATGCAAATCCAGCCGCAGATATTCGGGACATTT
TCGGCCATCATTTGGGCTCAGATTTTACATTATGATCAGTTAGACCTACT
CTTTTTGTTCCCAGTCCTGGAAATATCTTTGCTCAAGATCGTGACAGCAA
TTATACCACTCGGAAGGCCACATTGGCGTATACCATACAATAAAGGCATC
ACCTGGCCGGATATCTTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGG
CGGAATGTTACCCATTTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAA
TTGGAATCAATTGGGTCTTCTTGTGCATCGACACGCTGGGAGGACTGTTC
TCAATCTTTGCGCTTGTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGT
TATGTATATTGTTGTCGTGGTACTCGAGCTGGGAATCTACCTCAGCCACA
TCATATGGCGCATCCGATTCCGGGAGGCCCGGAAAGAAGCCAAACATTCG
GGTAGAAGTGTCGAGGATATTCTCCAAATGTCTAATCCCGCGTGAATGTC
CGCACCAACTGACGCCACTCCGGCATCCAATGTTCTTGGCACCATCGGCA
CCGTATTCTGGTGTATCCAGCTTGTCCCCCAGATATGGTATAACTGGCGA
CGGAAAAAGACAGAAGGATTACCTCCTGCAATGGGGTTCTTGTGGGCTGT
TTGTGCTGTGCCCATGGGTGTGTATTTGATCCTACAGGAAGTCAATCTCC
CTATGCAAATCCAGCCGCAGATATTCGGGACATTTTCGGCCATCATTTGG
GCTCAGATTTTACATTATGATCAGTTAGACCTACTCTTTTTGTTCCCAGT
CCTGGAAATATCTTTGCTCAAGATCGTGACAGCAATTATACCACTCGGAA
GGCCACATTGGCGTATACCATACAATAAAGGCATCACCTGGCCGGATATC
TTGGTTGGTGCGATAGCAACAGTGCTTCTCGCCGGCGGAATGTTACCCAT
TTATTTTGAATTGGGGAAAAGACAAGGCCGAGTAATTGGAATCAATTGGG
TCTTCTTGTGCATCGACACGCTGGGAGGACTGTTCTCAATCTTTGCGCTT
GTGGCACAAGGGTCGTTTGATATCCTTGGCGGGGTTATGTATATTGTTGT
CGTGGTACTCGAGCTGGGAATCTACCTCAGCCACATCATATGGCGCATCC
GATTCCGGGAGGCCCGGAAAGAAGCCAAACATTCGGGTAGAAGTGTCGAG
GATATTCTCCAAATGTCTAATCCCGCGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_171575ASPNIDRAFT_171575Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_171575-T1ASPNIDRAFT_171575-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_171575-T1.exon1ASPNIDRAFT_171575-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_171575-T1.exon2ASPNIDRAFT_171575-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_171575-T1.exon3ASPNIDRAFT_171575-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_171575-T1.exon4ASPNIDRAFT_171575-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_171575-T1.exon5ASPNIDRAFT_171575-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_171575-T1.exon6ASPNIDRAFT_171575-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_171575-T1.exon7ASPNIDRAFT_171575-T1.exon7Aspergillus niger ATCC 1015exon
ASPNIDRAFT_171575-T1.exon8ASPNIDRAFT_171575-T1.exon8Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_171575-T1.cdsASPNIDRAFT_171575-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR006603
DBxrefPFAM:PF04193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3743700..3744956 +
Powered by Drupal