You are here

Home

ASPNIDRAFT_43929-T1, ASPNIDRAFT_43929-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_43929-T1
Unique NameASPNIDRAFT_43929-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:122752..123615+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_43929-T1 ID=ASPNIDRAFT_43929-T1|Name=ASPNIDRAFT_43929-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=864bp|location=Sequence derived from alignment at ACJE01000005.1:122752..123615+ (Aspergillus niger ATCC 1015)
ATGGCTCTACCAGCTTGCAATCTGCTCAAGGGCAAAACAGCTGCCATCAC
CGGCGGCACGACAGGAATCGGGCGTGCGATCGCATTGGCCTTCATCACCC
AAGGCTGCAATGTTGCAGTCAACCATCTGGGTCTCCCCCAAGACGAGGTG
CATCGGCACAGTCTGCTTGACGAAGTCAAGTCCATCCAACAAGGCGGCAT
TGCGGCTGGCAAGATTCTCGAGATTCCGGGCGATGTGACTGCCCCGGAGA
CCAGCATAAACCTCGTCAAAGAAGCCGTTTCTCAATGGGGGAAGCTAGAT
ATTTTTGTCGCCAACGCAGGCGTGTTCAAACAAGCTGAATTTCTCCAGTG
AGTCTATTATCCTATAGTGAACGACAGAGAAGTGGTCACTAACATACCCA
GGATCGAGTCGTCTCTTCTCGACCACAGCATCGACGTCAACATCAAAGGC
TGCTTCTACTCCTGCCAAGCAGCTGCCCGGCAGATGGTCAAGCAGGGCCA
TGGCGGCTCCATCATCGGTATCTCCTCCGTCAGCGCGCTGGTCGGTGGAG
GCCTCCAGACCCACTACACGCCCACTAAGGCCGCTGTGCTTTCCATGATG
CAGTCCATGGCCATTTCTCTGGGCAAGGATCGGATCAGATGCAATGCTCT
GATGCCTGGGACCATCGCTACTCAGTTGGCTGATCATGATATGAAGAACC
CTACCAAGAAGGCTGCGCTCGAGGCGCGCATTCCGTTGGGGCGGATCGGA
AACCCGGACGATATGGCTGGCCCAGCGGTATTTCTGGCTTGTGAGGAGAT
GAGTCGATATGTAAATGCCACAGGGCTGTTGGCAGACGGTGGGATGTTTA
GTAACTTGCAATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:122752..123615+

>ASPNIDRAFT_43929-T1 ID=ASPNIDRAFT_43929-T1|Name=ASPNIDRAFT_43929-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2223bp|location=Sequence derived from alignment at ACJE01000005.1:122752..123615+ (Aspergillus niger ATCC 1015)
ATGGCTCTACCAGCTTGCAATCTGCTCAAGGGCAAAACAGCTGCCATCAC
CGGCGGCACGACAGGAATCGGGCACGAGGTGCATCGGCACAGTCTGCTTG
ACGAAGTCAAGTCCATCCAACAAGGCGGCATTGCGGCTGGCAAGATTCTC
GAGATTCCGGGCGATGTGACTGCCCCGGAGACCAGCATAAACCTCGTCAA
AGAAGCCGTTTCTCAATGGGGGAAGCTAGATATTTTTGTCGCCAACGCAG
GCGTGTTCAAACAAGCTGAATTTCTCCAGATCGAGTCGTCTCTTCTCGAC
CACAGCATCGACGTCAACATCAAAGGCTGCTTCTACTCCTGCCAAGCAGC
TGCCCGGCAGATGGTCAAGCAGGGCCATGGCGGCTCCATCATCGGTATCT
CCTCCGTCAGCGCGCTGGTCGGTGGAGGCCTCCAGACCCACTACACGCCC
ACTAAGGCCGCTGTGCTTTCCATGATGCAGTCCATGGCCATTTCTCTGGG
CAAGGATCGGATCAGATGCAATGCTCTGATGCCTGGGACCATCGCTACTC
AGTTGGCTGATCATGATATGAAGAACCCTACCAAGAAGGCTGCGCTCGAG
GCGCGCATTCCGTTGGGGCGGATCGGAAACCCGGACGATATGGCTGGCCC
AGCGGTATTTCTGGCTTGTGAGGAGATGAGTCGATATGTAAATGCCACAG
GGCTGTTGGCAGACGGTGGGATGTTTAGTAACTTGCAATAGATGGCTCTA
CCAGCTTGCAATCTGCTCAAGGGCAAAACAGCTGCCATCACCGGCGGCAC
GACAGGAATCGGGCACGAGGTGCATCGGCACAGTCTGCTTGACGAAGTCA
AGTCCATCCAACAAGGCGGCATTGCGGCTGGCAAGATTCTCGAGATTCCG
GGCGATGTGACTGCCCCGGAGACCAGCATAAACCTCGTCAAAGAAGCCGT
TTCTCAATGGGGGAAGCTAGATATTTTTGTCGCCAACGCAGGCGTGTTCA
AACAAGCTGAATTTCTCCAGATCGAGTCGTCTCTTCTCGACCACAGCATC
GACGTCAACATCAAAGGCTGCTTCTACTCCTGCCAAGCAGCTGCCCGGCA
GATGGTCAAGCAGGGCCATGGCGGCTCCATCATCGGTATCTCCTCCGTCA
GCGCGCTGGTCGGTGGAGGCCTCCAGACCCACTACACGCCCACTAAGGCC
GCTGTGCTTTCCATGATGCAGTCCATGGCCATTTCTCTGGGCAAGGATCG
GATCAGATGCAATGCTCTGATGCCTGGGACCATCGCTACTCAGTTGGCTG
ATCATGATATGAAGAACCCTACCAAGAAGGCTGCGCTCGAGGCGCGCATT
CCGTTGGGGCGGATCGGAAACCCGGACGATATGGCTGGCCCAGCGGTATT
TCTGGCTTGTGAGGAGATGAGTCGATATGTAAATGCCACAGGGCTGTTGG
CAGACGGTGGGATGTTTAGTAACTTGCAATAGATGGCTCTACCAGCTTGC
AATCTGCTCAAGGGCAAAACAGCTGCCATCACCGGCGGCACGACAGGAAT
CGGGCACGAGGTGCATCGGCACAGTCTGCTTGACGAAGTCAAGTCCATCC
AACAAGGCGGCATTGCGGCTGGCAAGATTCTCGAGATTCCGGGCGATGTG
ACTGCCCCGGAGACCAGCATAAACCTCGTCAAAGAAGCCGTTTCTCAATG
GGGGAAGCTAGATATTTTTGTCGCCAACGCAGGCGTGTTCAAACAAGCTG
AATTTCTCCAGATCGAGTCGTCTCTTCTCGACCACAGCATCGACGTCAAC
ATCAAAGGCTGCTTCTACTCCTGCCAAGCAGCTGCCCGGCAGATGGTCAA
GCAGGGCCATGGCGGCTCCATCATCGGTATCTCCTCCGTCAGCGCGCTGG
TCGGTGGAGGCCTCCAGACCCACTACACGCCCACTAAGGCCGCTGTGCTT
TCCATGATGCAGTCCATGGCCATTTCTCTGGGCAAGGATCGGATCAGATG
CAATGCTCTGATGCCTGGGACCATCGCTACTCAGTTGGCTGATCATGATA
TGAAGAACCCTACCAAGAAGGCTGCGCTCGAGGCGCGCATTCCGTTGGGG
CGGATCGGAAACCCGGACGATATGGCTGGCCCAGCGGTATTTCTGGCTTG
TGAGGAGATGAGTCGATATGTAAATGCCACAGGGCTGTTGGCAGACGGTG
GGATGTTTAGTAACTTGCAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43929ASPNIDRAFT_43929Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43929-T1.exon1ASPNIDRAFT_43929-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_43929-T1.exon2ASPNIDRAFT_43929-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_43929-T1.exon3ASPNIDRAFT_43929-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43929-T1.cdsASPNIDRAFT_43929-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43929-T1ASPNIDRAFT_43929-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productdehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:122752..123615 +
Powered by Drupal