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ASPNIDRAFT_135894-T1, ASPNIDRAFT_135894-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_135894-T1
Unique NameASPNIDRAFT_135894-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:257853..259071-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_135894-T1 ID=ASPNIDRAFT_135894-T1|Name=ASPNIDRAFT_135894-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1219bp|location=Sequence derived from alignment at ACJE01000006.1:257853..259071- (Aspergillus niger ATCC 1015)
ATGCCGCCACCATCACTTCTGCAGCTCTGCACGGCGACTGCGATTAGGAA
CGTGAAACGTATGCAGAGCCCAATCCCACCTTGACAAGAGCCCATCGGTA
AACTGATACTAAGTGCTCGTGCAGAATTAAATGATATTGGCAACATTCCC
TATGTACTCGCTCGTCCATTTCTACTGAAAGTGGAGAGTCCTGAGAAACT
GGTGAGTCTGCAGCGGAACCCCCCCGTCCTTCGTCAGTAACCCTTTGGCT
AACAGTCAAACTCACCCCACAACACAGAGAACTCTGGAATTACAGTCCCC
ACATTTGATGCGAGATGACGAGGAACTCTGGCTGGAGTTCATCAAAAGAG
ATATCCCGCGATGGGACGAATACGATCTGCCTGAGAAACCCGATTGTTGG
TATGACGTATATTGTGACCTCCGGGAACAAGTCCAACGGGCAGTGGAAGA
GGATGCTGAAAAGCTGAAGATGGCTTTAGATGGCATCAGCTCGGAGCGCC
AGGAAAAAAGTGCCAAATTCGTTACCGATCGTCGAATCATCGGTCTCCCC
CGAGAGAGGCCGACCGCGAGGCAACGATATGCTTCGTACGATCGGAGACT
GGGCGGCTCGCCGACGTCGTCATCTTCCATGACCCCCTGGGCTTTTGGTA
GGCCAAGAGAAACAAAGAAAAAGAACAGCATATTTACAGCAACAAAGAGG
AATAATGTTCTTACTGTGCCAACAAAGCACCTTAATAACAGAGCTTCCCA
GGTCAGACAGGCTCCGCGGTCTCTGATCGAGGACCATATACGTCCTGCTG
AGCCCCCTGTCGCTCGACGAAAGGAGGCTCCAGCTCTGAGAGCGCCCGGT
CGGTCACGGCCCCAGATGAGTGCTCCCTCCACAAGCCAGAATAGTCTGGA
AGTTGGTCCCAGCTTGCGGGAAAGAGAGGCTCGTTTACGAGCAATAACCC
AATCGCATAGCCCTGCTGCAGCCAGTAAGCCTATGGCAGGGAGAAATGCA
CAGACATCGCTGCCAACAAGAGGTCCATCCGGATCTCTATCAGGGGTAGC
GGCCAAGAAACAGACATCCCATCCGCTCAGTAACAGTGCGACTGGCTCTC
ATCGGGGGTCTGCCGTAGAGGACATGCCAGCGTCTCCGCCACAACCACCC
CGTCCGGCAGTTGTCCGCAAACGTCCTGCCCCGAACCTCTTTATCCAACC
AAAGAAGAAGAAACTGAAC
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Coding sequence (CDS) from alignment at ACJE01000006.1:257853..259071-

>ASPNIDRAFT_135894-T1 ID=ASPNIDRAFT_135894-T1|Name=ASPNIDRAFT_135894-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4128bp|location=Sequence derived from alignment at ACJE01000006.1:257853..259071- (Aspergillus niger ATCC 1015)
AGAAACAAAGAAAAAGAACAGCATATTTACAGCAACAAAGAGGAATAATG
TTCTTACTGTGCCAACAAAGCACCTTAATAACAGAGCTTCCCAGGTCAGA
CAGGCTCCGCGGTCTCTGATCGAGGACCATATACGTCCTGCTGAGCCCCC
TGTCGCTCGACGAAAGGAGGCTCCAGCTCTGAGAGCGCCCGGTCGGTCAC
GGCCCCAGATGAGTGCTCCCTCCACAAGCCAGAATAGTCTGGAAGTTGGT
CCCAGCTTGCGGGAAAGAGAGGCTCGTTTACGAGCAATAACCCAATCGCA
TAGCCCTGCTGCAGCCAGTAAGCCTATGGCAGGGAGAAATGCACAGACAT
CGCTGCCAACAAGAGGTCCATCCGGATCTCTATCAGGGGTAGCGGCCAAG
AAACAGACATCCCATCCGCTCAGTAACAGTGCGACTGGCTCTCATCGGGG
GTCTGCCGTAGAGGACATGCCAGCGTCTCCGCCACAACCACCCCGTCCGG
CAGTTGTCCGCAAACGTCCTGCCCCGAACCTCTTTATCCAACCAAAGAAG
AAGAAACTGAGAACTCTGGAATTACAGTCCCCACATTTGATGCGAGATGA
CGAGGAACTCTGGCTGGAGTTCATCAAAAGAGATATCCCGCGATGGGACG
AATACGATCTGCCTGAGAAACCCGATTGTTGGTATGACGTATATTGTGAC
CTCCGGGAACAAGTCCAACGGGCAGTGGAAGAGGATGCTGAAAAGCTGAA
GATGGCTTTAGATGGCATCAGCTCGGAGCGCCAGGAAAAAAGTGCCAAAT
TCGTTACCGATCGTCGAATCATCGGTCTCCCCCGAGAGAGGCCGACCGCG
AGGCAACGATATGCTTCGTACGATCGGAGACTGGGCGGCTCGCCGACAAT
TAAATGATATTGGCAACATTCCCTATGTACTCGCTCGTCCATTTCTACTG
AAAGTGGAGAGTCCTGAGAAACTGATGCCGCCACCATCACTTCTGCAGCT
CTGCACGGCGACTGCGATTAGGAACGTGAAACAGAAACAAAGAAAAAGAA
CAGCATATTTACAGCAACAAAGAGGAATAATGTTCTTACTGTGCCAACAA
AGCACCTTAATAACAGAGCTTCCCAGGTCAGACAGGCTCCGCGGTCTCTG
ATCGAGGACCATATACGTCCTGCTGAGCCCCCTGTCGCTCGACGAAAGGA
GGCTCCAGCTCTGAGAGCGCCCGGTCGGTCACGGCCCCAGATGAGTGCTC
CCTCCACAAGCCAGAATAGTCTGGAAGTTGGTCCCAGCTTGCGGGAAAGA
GAGGCTCGTTTACGAGCAATAACCCAATCGCATAGCCCTGCTGCAGCCAG
TAAGCCTATGGCAGGGAGAAATGCACAGACATCGCTGCCAACAAGAGGTC
CATCCGGATCTCTATCAGGGGTAGCGGCCAAGAAACAGACATCCCATCCG
CTCAGTAACAGTGCGACTGGCTCTCATCGGGGGTCTGCCGTAGAGGACAT
GCCAGCGTCTCCGCCACAACCACCCCGTCCGGCAGTTGTCCGCAAACGTC
CTGCCCCGAACCTCTTTATCCAACCAAAGAAGAAGAAACTGAGAACTCTG
GAATTACAGTCCCCACATTTGATGCGAGATGACGAGGAACTCTGGCTGGA
GTTCATCAAAAGAGATATCCCGCGATGGGACGAATACGATCTGCCTGAGA
AACCCGATTGTTGGTATGACGTATATTGTGACCTCCGGGAACAAGTCCAA
CGGGCAGTGGAAGAGGATGCTGAAAAGCTGAAGATGGCTTTAGATGGCAT
CAGCTCGGAGCGCCAGGAAAAAAGTGCCAAATTCGTTACCGATCGTCGAA
TCATCGGTCTCCCCCGAGAGAGGCCGACCGCGAGGCAACGATATGCTTCG
TACGATCGGAGACTGGGCGGCTCGCCGACAATTAAATGATATTGGCAACA
TTCCCTATGTACTCGCTCGTCCATTTCTACTGAAAGTGGAGAGTCCTGAG
AAACTGATGCCGCCACCATCACTTCTGCAGCTCTGCACGGCGACTGCGAT
TAGGAACGTGAAACAGAAACAAAGAAAAAGAACAGCATATTTACAGCAAC
AAAGAGGAATAATGTTCTTACTGTGCCAACAAAGCACCTTAATAACAGAG
CTTCCCAGGTCAGACAGGCTCCGCGGTCTCTGATCGAGGACCATATACGT
CCTGCTGAGCCCCCTGTCGCTCGACGAAAGGAGGCTCCAGCTCTGAGAGC
GCCCGGTCGGTCACGGCCCCAGATGAGTGCTCCCTCCACAAGCCAGAATA
GTCTGGAAGTTGGTCCCAGCTTGCGGGAAAGAGAGGCTCGTTTACGAGCA
ATAACCCAATCGCATAGCCCTGCTGCAGCCAGTAAGCCTATGGCAGGGAG
AAATGCACAGACATCGCTGCCAACAAGAGGTCCATCCGGATCTCTATCAG
GGGTAGCGGCCAAGAAACAGACATCCCATCCGCTCAGTAACAGTGCGACT
GGCTCTCATCGGGGGTCTGCCGTAGAGGACATGCCAGCGTCTCCGCCACA
ACCACCCCGTCCGGCAGTTGTCCGCAAACGTCCTGCCCCGAACCTCTTTA
TCCAACCAAAGAAGAAGAAACTGAGAACTCTGGAATTACAGTCCCCACAT
TTGATGCGAGATGACGAGGAACTCTGGCTGGAGTTCATCAAAAGAGATAT
CCCGCGATGGGACGAATACGATCTGCCTGAGAAACCCGATTGTTGGTATG
ACGTATATTGTGACCTCCGGGAACAAGTCCAACGGGCAGTGGAAGAGGAT
GCTGAAAAGCTGAAGATGGCTTTAGATGGCATCAGCTCGGAGCGCCAGGA
AAAAAGTGCCAAATTCGTTACCGATCGTCGAATCATCGGTCTCCCCCGAG
AGAGGCCGACCGCGAGGCAACGATATGCTTCGTACGATCGGAGACTGGGC
GGCTCGCCGACAATTAAATGATATTGGCAACATTCCCTATGTACTCGCTC
GTCCATTTCTACTGAAAGTGGAGAGTCCTGAGAAACTGATGCCGCCACCA
TCACTTCTGCAGCTCTGCACGGCGACTGCGATTAGGAACGTGAAACAGAA
ACAAAGAAAAAGAACAGCATATTTACAGCAACAAAGAGGAATAATGTTCT
TACTGTGCCAACAAAGCACCTTAATAACAGAGCTTCCCAGGTCAGACAGG
CTCCGCGGTCTCTGATCGAGGACCATATACGTCCTGCTGAGCCCCCTGTC
GCTCGACGAAAGGAGGCTCCAGCTCTGAGAGCGCCCGGTCGGTCACGGCC
CCAGATGAGTGCTCCCTCCACAAGCCAGAATAGTCTGGAAGTTGGTCCCA
GCTTGCGGGAAAGAGAGGCTCGTTTACGAGCAATAACCCAATCGCATAGC
CCTGCTGCAGCCAGTAAGCCTATGGCAGGGAGAAATGCACAGACATCGCT
GCCAACAAGAGGTCCATCCGGATCTCTATCAGGGGTAGCGGCCAAGAAAC
AGACATCCCATCCGCTCAGTAACAGTGCGACTGGCTCTCATCGGGGGTCT
GCCGTAGAGGACATGCCAGCGTCTCCGCCACAACCACCCCGTCCGGCAGT
TGTCCGCAAACGTCCTGCCCCGAACCTCTTTATCCAACCAAAGAAGAAGA
AACTGAGAACTCTGGAATTACAGTCCCCACATTTGATGCGAGATGACGAG
GAACTCTGGCTGGAGTTCATCAAAAGAGATATCCCGCGATGGGACGAATA
CGATCTGCCTGAGAAACCCGATTGTTGGTATGACGTATATTGTGACCTCC
GGGAACAAGTCCAACGGGCAGTGGAAGAGGATGCTGAAAAGCTGAAGATG
GCTTTAGATGGCATCAGCTCGGAGCGCCAGGAAAAAAGTGCCAAATTCGT
TACCGATCGTCGAATCATCGGTCTCCCCCGAGAGAGGCCGACCGCGAGGC
AACGATATGCTTCGTACGATCGGAGACTGGGCGGCTCGCCGACAATTAAA
TGATATTGGCAACATTCCCTATGTACTCGCTCGTCCATTTCTACTGAAAG
TGGAGAGTCCTGAGAAACTGATGCCGCCACCATCACTTCTGCAGCTCTGC
ACGGCGACTGCGATTAGGAACGTGAAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0070449elongin complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135894ASPNIDRAFT_135894Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135894-T1ASPNIDRAFT_135894-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135894-T1.cdsASPNIDRAFT_135894-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135894-T1.utr3p1ASPNIDRAFT_135894-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135894-T1.exon4ASPNIDRAFT_135894-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_135894-T1.exon3ASPNIDRAFT_135894-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_135894-T1.exon2ASPNIDRAFT_135894-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_135894-T1.exon1ASPNIDRAFT_135894-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR010684
DBxrefPFAM:PF06881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:257853..259071 -
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