You are here

Home

ASPNIDRAFT_210376-T1, ASPNIDRAFT_210376-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210376-T1
Unique NameASPNIDRAFT_210376-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1718782..1719954+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210376-T1 ID=ASPNIDRAFT_210376-T1|Name=ASPNIDRAFT_210376-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1173bp|location=Sequence derived from alignment at ACJE01000008.1:1718782..1719954+ (Aspergillus niger ATCC 1015)
ATGGCAAAAACCCCCATCCTCATTCTCGACGGCGGTCTCGGCACCTCCCT
CCAAGACCACTACAACATTACCTTCAGCAGCAGCACCACCCCTCTCTGGT
CCTCGCACCTAATGATCTCCGACCCCTCGACCCTCCTCTCCTGCCAACGC
GACTTCACCACCACCGCCGCCGTCGACGTCCTCCTAACTGCCACCTACCA
AGTCTCTCCGGAGGGCTTCCAGCGCACAAAAACCCCTTCCCACCCGACGG
GAATCCCCCGCGAGAGTATCGCCGGTTACCTTCGCACCGCCCTCGACGTC
GCCGGACAAGCTGTGCAGAATACTTCCGCCTCCGTGGCGCTAAGTCTAGG
TCCCTATGGCGCGTGCATGATCCCGGGACAAGAGTATAGTGGGAAGTATG
ACGGGGAACATGATACCGAGGAGAAGCTGTGGAGGTGGCATACGGACCGG
TTGGGACTTTTTAATGATGAGGCGATGGAGGGGATGAGGTTGGGAGAGAG
GGTGAAGTATATTGCTATGGAGACGGTGCCGAGGATTGATGAGGTGAGGG
CTGTGAGGAGGGCTGTGGGATCTTCTAGGTTTTGTGAGGGGATCCCGTTT
TGGGTGGCTTGTGTTTTTCCGATTGAGGATAAGGATACCCTGCCGGATGG
AAGTACCGTTGATGAGGTGGTGGAGGCGGCGTTGTTGCCGATTGAGGGGG
GTGCTACGCCGTGGGGAATTGGGATTAATTGTACGAAGCTTCATAAGTTG
CCCCGGTTGGTGAAATTGTTTGGGGATGCTGTGGAGAGGTTGTTGAGGGA
TGGGCGTATTCAGGAGAGGCCTGCGTTGGTGCTGTATCCGGATGGCACGC
AGGGGGAGGTTTATAATACTGCTACGCAGACGTGGGAAAAGGTTCAAGAT
AAGAGTGGTGCGGCTGATTCGGTAAGTGAACCTTTTGGATGTTGGTTGTG
ATATTGAAGAGATATATGTGCTGACTGATTAGCGACCCTGGGAGGTGCAA
TTGGCACAGGTGGTCAATGACGCTAGCGCGACTGGCCAGTTCAGCTCTAT
CCTTGTTGGCGGTTGCTGCAAGGCTTCGTTCAATGATATCAAGAGGCTTC
GCGAACAGCTCCGCCCGCAATAAATTAAAACTTGTATAATATGTATATAG
AAAGTATAAGACTTTTTTGACGG
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:1718782..1719954+

>ASPNIDRAFT_210376-T1 ID=ASPNIDRAFT_210376-T1|Name=ASPNIDRAFT_210376-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2124bp|location=Sequence derived from alignment at ACJE01000008.1:1718782..1719954+ (Aspergillus niger ATCC 1015)
ATGGCAAAAACCCCCATCCTCATTCTCGACGGCGGTCTCGGCACCTCCCT
CCAAGACCACTACAACATTACCTTCAGCAGCAGCACCACCCCTCTCTGGT
CCTCGCACCTAATGATCTCCGACCCCTCGACCCTCCTCTCCTGCCAACGC
GACTTCACCACCACCGCCGCCGTCGACGTCCTCCTAACTGCCACCTACCA
AGTCTCTCCGGAGGGCTTCCAGCGCACAAAAACCCCTTCCCACCCGACGG
GAATCCCCCGCGAGAGTATCGCCGGTTACCTTCGCACCGCCCTCGACGTC
GCCGGACAAGCTGTGCAGAATACTTCCGCCTCCGTGGCGCTAAGTCTAGG
TCCCTATGGCGCGTGCATGATCCCGGGACAAGAGTATAGTGGGAAGTATG
ACGGGGAACATGATACCGAGGAGAAGCTGTGGAGGTGGCATACGGACCGG
TTGGGACTTTTTAATGATGAGGCGATGGAGGGGATGAGGTTGGGAGAGAG
GGTGAAGTATATTGCTATGGAGACGGTGCCGAGGATTGATGAGGTGAGGG
CTGTGAGGAGGGCTGTGGGATCTTCTAGGTTTTGTGAGGGGATCCCGTTT
TGGGTGGCTTGTGTTTTTCCGATTGAGGATAAGGATACCCTGCCGGATGG
AAGTACCGTTGATGAGGTGGTGGAGGCGGCGTTGTTGCCGATTGAGGGGG
GTGCTACGCCGTGGGGAATTGGGATTAATTGTACGAAGCTTCATAAGTTG
CCCCGGTTGGTGAAATTGTTTGGGGATGCTGTGGAGAGGTTGTTGAGGGA
TGGGCGTATTCAGGAGAGGCCTGCGTTGGTGCTGTATCCGGATGGCACGC
AGGGGGAGGTTTATAATACTGCTACGCAGACGTGGGAAAAGGTTCAAGAT
AAGAGTGGTGCGGCTGATTCGCGACCCTGGGAGGTGCAATTGGCACAGGT
GGTCAATGACGCTAGCGCGACTGGCCAGTTCAGCTCTATCCTTGTTGGCG
GTTGCTGCAAGGCTTCGTTCAATGATATCAAGAGGCTTCGCGAACAGCTC
CGCCCGCAATAAATGGCAAAAACCCCCATCCTCATTCTCGACGGCGGTCT
CGGCACCTCCCTCCAAGACCACTACAACATTACCTTCAGCAGCAGCACCA
CCCCTCTCTGGTCCTCGCACCTAATGATCTCCGACCCCTCGACCCTCCTC
TCCTGCCAACGCGACTTCACCACCACCGCCGCCGTCGACGTCCTCCTAAC
TGCCACCTACCAAGTCTCTCCGGAGGGCTTCCAGCGCACAAAAACCCCTT
CCCACCCGACGGGAATCCCCCGCGAGAGTATCGCCGGTTACCTTCGCACC
GCCCTCGACGTCGCCGGACAAGCTGTGCAGAATACTTCCGCCTCCGTGGC
GCTAAGTCTAGGTCCCTATGGCGCGTGCATGATCCCGGGACAAGAGTATA
GTGGGAAGTATGACGGGGAACATGATACCGAGGAGAAGCTGTGGAGGTGG
CATACGGACCGGTTGGGACTTTTTAATGATGAGGCGATGGAGGGGATGAG
GTTGGGAGAGAGGGTGAAGTATATTGCTATGGAGACGGTGCCGAGGATTG
ATGAGGTGAGGGCTGTGAGGAGGGCTGTGGGATCTTCTAGGTTTTGTGAG
GGGATCCCGTTTTGGGTGGCTTGTGTTTTTCCGATTGAGGATAAGGATAC
CCTGCCGGATGGAAGTACCGTTGATGAGGTGGTGGAGGCGGCGTTGTTGC
CGATTGAGGGGGGTGCTACGCCGTGGGGAATTGGGATTAATTGTACGAAG
CTTCATAAGTTGCCCCGGTTGGTGAAATTGTTTGGGGATGCTGTGGAGAG
GTTGTTGAGGGATGGGCGTATTCAGGAGAGGCCTGCGTTGGTGCTGTATC
CGGATGGCACGCAGGGGGAGGTTTATAATACTGCTACGCAGACGTGGGAA
AAGGTTCAAGATAAGAGTGGTGCGGCTGATTCGCGACCCTGGGAGGTGCA
ATTGGCACAGGTGGTCAATGACGCTAGCGCGACTGGCCAGTTCAGCTCTA
TCCTTGTTGGCGGTTGCTGCAAGGCTTCGTTCAATGATATCAAGAGGCTT
CGCGAACAGCTCCGCCCGCAATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210376ASPNIDRAFT_210376Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210376-T1.exon1ASPNIDRAFT_210376-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210376-T1.exon2ASPNIDRAFT_210376-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210376-T1.cdsASPNIDRAFT_210376-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210376-T1.utr3p1ASPNIDRAFT_210376-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210376-T1ASPNIDRAFT_210376-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003726
DBxrefInterPro:IPR036589
DBxrefPFAM:PF02574
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1718782..1719954 +
Powered by Drupal