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ASPNIDRAFT_127789-T1, ASPNIDRAFT_127789-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_127789-T1
Unique NameASPNIDRAFT_127789-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1061569..1061998-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_127789-T1 ID=ASPNIDRAFT_127789-T1|Name=ASPNIDRAFT_127789-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=430bp|location=Sequence derived from alignment at ACJE01000010.1:1061569..1061998- (Aspergillus niger ATCC 1015)
CAGTTACCTCTCGGTCTCCTGACGGCCGCGCAAGGCCACCCCATGCTCGT
GGAACTCAAGAACGGCGAAACCCTCAACGGACACCTCGCCAATTGCGACA
ACTGGATGAACCTGATACTCAAGGAAGTTGTTCAGACGAGTCCCGAAGGT
GACCGCTTCTTCCGGCTACCAGAGGTCTACGTCAGAGGAAACAATGTGAG
TATCTTGCCTGCGCCCACCCTAGATCCAATTTCAGGGAATCTCCCCGGCC
CTCCCTACTAACCGCTTATAGATCAAATACCTACGGATCCCCGAAGAAAT
CATAGAGATGGTCAAGGAGCAACAGGCGAACCAGTCGCAAAATCGCAACC
GCGGGCCGCGTGAGGGTGGTAGGGGTGACCGAGGTCGTGGTGGAGGCCGG
GGTCGTGGACGCGGCCGCGGCCGTGGTGGC
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Coding sequence (CDS) from alignment at ACJE01000010.1:1061569..1061998-

>ASPNIDRAFT_127789-T1 ID=ASPNIDRAFT_127789-T1|Name=ASPNIDRAFT_127789-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=708bp|location=Sequence derived from alignment at ACJE01000010.1:1061569..1061998- (Aspergillus niger ATCC 1015)
ATCAAATACCTACGGATCCCCGAAGAAATCATAGAGATGGTCAAGGAGCA
ACAGGCGAACCAGTCGCAAAATCGCAACCGCGGGCCGCGTGAGGGTGGTA
GGGGTGACCGAGGTCGTGGTGGAGGCCGGGGTCGTGGACGCGGCCGCGGC
CGTGGTGGCCAGTTACCTCTCGGTCTCCTGACGGCCGCGCAAGGCCACCC
CATGCTCGTGGAACTCAAGAACGGCGAAACCCTCAACGGACACCTCGCCA
ATTGCGACAACTGGATGAACCTGATACTCAAGGAAGTTGTTCAGACGAGT
CCCGAAGGTGACCGCTTCTTCCGGCTACCAGAGGTCTACGTCAGAGGAAA
CAATATCAAATACCTACGGATCCCCGAAGAAATCATAGAGATGGTCAAGG
AGCAACAGGCGAACCAGTCGCAAAATCGCAACCGCGGGCCGCGTGAGGGT
GGTAGGGGTGACCGAGGTCGTGGTGGAGGCCGGGGTCGTGGACGCGGCCG
CGGCCGTGGTGGCCAGTTACCTCTCGGTCTCCTGACGGCCGCGCAAGGCC
ACCCCATGCTCGTGGAACTCAAGAACGGCGAAACCCTCAACGGACACCTC
GCCAATTGCGACAACTGGATGAACCTGATACTCAAGGAAGTTGTTCAGAC
GAGTCCCGAAGGTGACCGCTTCTTCCGGCTACCAGAGGTCTACGTCAGAG
GAAACAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0000956nuclear-transcribed mRNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LSM4ASPNIDRAFT_127789Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127789-T1ASPNIDRAFT_127789-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127789-T1.cdsASPNIDRAFT_127789-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_127789-T1.exon2ASPNIDRAFT_127789-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_127789-T1.exon1ASPNIDRAFT_127789-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034101
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductRNA processing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1061569..1061998 -
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