You are here

Home

ASPNIDRAFT_57277-T1, ASPNIDRAFT_57277-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_57277-T1
Unique NameASPNIDRAFT_57277-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:657654..659334+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_57277-T1 ID=ASPNIDRAFT_57277-T1|Name=ASPNIDRAFT_57277-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1681bp|location=Sequence derived from alignment at ACJE01000012.1:657654..659334+ (Aspergillus niger ATCC 1015)
CTGATAACGACCGAATCCGACTTTCGCTTTCCCTTCTCCAAGAGTTTACG
AACCCAGATCTTTCATCCTTCTCCTAGTACAGCTTCTGCTATCTTCATTT
TCCTTCGAAAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCC
AGCTCGACAAGGAGGTAAGTCGTGTGTGCGTTTTCTGGTTTTGTGTCCTA
TTCCTCCTCCCTGTCTCCCCCCAATCGGTTTGCGAAAGGGGTTTCCTTTC
TACCTGCATTGTATCTGCTCGTTTATTCCTGTCTTACAATGTTTATTCAT
CACGGATTGGAATCGTCGGAGAGCTGGAGGATGGGATGAAGTCGTGTTGT
TGTTCTCCGATTTCTGCCTACTTGCATATTTCTCAGCCGCCAGTTTCGAA
GCTAAACTAACCATCTCCTCTTCACACTTTAGCTCTCCAAGTACCCTGTC
CTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATCCT
GGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGGTG
AATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCCTG
AACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACAGGTATGCTCCAT
CTCTTTATTCCCTACTGTTTTCTTAGATGATAATTGTGCTGATGATCGTG
ACCCTGCGTTTAGTGGTTGACGGTATGTTTCTCGTGATCCCCGTTATCGC
GACATGACTCGGGCGTTTCATACGCCTAGGTTATCTTTCTGCACGTGACG
ACGTGCGCTCGTCAGCTAGCGGTTATACTGATTGGCATGTGATTCTTCTA
GTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTG
CCCCCTACTGGTTCCGTAAGTATTCGCAACGTTTGATGTGATTCCTACAG
TGGAAAGTACATAAACTGATCGCGACGCTTCAACACAGCCTTCTACTATA
TCTTCAAGTTCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAAGTAA
GCTATCCACTTCCCGCAGCTCCGAAACCCATTATTATTATCATCACCAGA
ACTCCGACTGACCCTCTTCTCCAGCGGTGCTCAAGTTGTCTTCCACTCCT
TCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCC
AACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGTAAACAGCTAA
ACCGCGAACTCCGGGTGAATCTGTGGCTTGATCTCGGTCAACTCACAGAG
TCAGTCGTGTCTCGGTTTATGTTTTGGAGGAATTTTGCAAAACAAAGGCA
ATTACGAAAGCTTTCCTTCTAGGATCCTTTCAATGCCGATATGTTTGGAG
AAAATCGATGTAACTGGATGAAGCGGTGTGATTGATTGATTGATTGACTG
ATTGATACGATACGATACTTTGAGCCTTGTCGGGCGAGAATTGGGCTATC
CTTGTGTGGTTGTTTTCATGCTGTTCATTTTTGCCATGACTTGAATCTAA
GTAGAATTGTGTGTTGAATCTTTTCGCGTTGGTTGGAAAGGGGAGAGGTT
ATCACGGGCCTAATATCCGTGCTCTCTCCCATGGCTGTGTGGTATTATTA
TTATAGCTATACTTTGATGCATTATGCCTCG
back to top

Coding sequence (CDS) from alignment at ACJE01000012.1:657654..659334+

>ASPNIDRAFT_57277-T1 ID=ASPNIDRAFT_57277-T1|Name=ASPNIDRAFT_57277-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3060bp|location=Sequence derived from alignment at ACJE01000012.1:657654..659334+ (Aspergillus niger ATCC 1015)
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCG
TCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTG
GTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCT
CATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCG
ACGACACACAGTGGTTGACGTACTGGGTTGTTTACGCCTTCTTCACCGTC
ATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTT
CAAGTTCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTC
AAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAG
GGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAA
GGACCAGTAAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCC
AGCTCGACAAGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGC
CAGACCTCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTA
CTTCTTCTTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCG
CTGGTTTCCTCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCC
GGAAAGGCCGACGACACACAGTGGTTGACGTACTGGGTTGTTTACGCCTT
CTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCT
ACTATATCTTCAAGTTCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACC
AACGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCG
CTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGG
CTGCTGCTAAGGACCAGTAAATGGCCTCTTTCCAGGATCGTGCTCAGCAC
GCCATTGCCCAGCTCGACAAGGAGCTCTCCAAGTACCCTGTCCTCAACAA
CTTGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGG
TCGGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGGTGAATTCCTC
GTCAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCCTGAACGCTCT
GTTCACCGCCGGAAAGGCCGACGACACACAGTGGTTGACGTACTGGGTTG
TTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGG
TTCCCCTTCTACTATATCTTCAAGTTCGCCCTTGTCCTCTGGATGTCTCT
TCCCCAGACCAACGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCG
TGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCC
CAGGCCGAGGCTGCTGCTAAGGACCAGTAAATGGCCTCTTTCCAGGATCG
TGCTCAGCACGCCATTGCCCAGCTCGACAAGGAGCTCTCCAAGTACCCTG
TCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATC
CTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGG
TGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCC
TGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACAGTGGTTGACG
TACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTGC
CCCCTACTGGTTCCCCTTCTACTATATCTTCAAGTTCGCCCTTGTCCTCT
GGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTTGTCTTCCACTCCTTC
ATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCCAA
CCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGTAAATGGCCTCTT
TCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAAGGAGCTCTCC
AAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGT
CTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCA
ACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGT
TACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACA
GTGGTTGACGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAGCG
CCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTTCAAGTTCGCC
CTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTTGTCTT
CCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCA
CTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGTAA
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCG
TCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTG
GTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCT
CATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCG
ACGACACACAGTGGTTGACGTACTGGGTTGTTTACGCCTTCTTCACCGTC
ATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTT
CAAGTTCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTC
AAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAG
GGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAA
GGACCAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YOP1ASPNIDRAFT_57277Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57277-T1ASPNIDRAFT_57277-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57277-T1.utr5p1ASPNIDRAFT_57277-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57277-T1.exon1ASPNIDRAFT_57277-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57277-T1.exon2ASPNIDRAFT_57277-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57277-T1.exon3ASPNIDRAFT_57277-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57277-T1.exon4ASPNIDRAFT_57277-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57277-T1.exon5ASPNIDRAFT_57277-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57277-T1.exon6ASPNIDRAFT_57277-T1.exon6Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57277-T1.cdsASPNIDRAFT_57277-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57277-T1.utr3p1ASPNIDRAFT_57277-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264USX
DBxrefInterPro:IPR004345
DBxrefPFAM:PF03134
ProductER membrane protein DP1/Yop1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:657654..659334 +
Powered by Drupal