You are here

Home

ASPNIDRAFT_135973-T1, ASPNIDRAFT_135973-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_135973-T1
Unique NameASPNIDRAFT_135973-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:532337..532897-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_135973-T1 ID=ASPNIDRAFT_135973-T1|Name=ASPNIDRAFT_135973-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=561bp|location=Sequence derived from alignment at ACJE01000013.1:532337..532897- (Aspergillus niger ATCC 1015)
ATGGCTTCTCTCAATAGCACAATCGTCCCTATTACCGGCGCCAACCAGGG
TCTAGGCTTTGCGGTCGCCAAAAAGCTAGCCACCGATCACCCGGGATACC
ATGTGCTCATGGGCTACCGCGATGCTACTAAGGGCGAAGAGGCCATTGCC
AAGCTAAAAAGCCGAGGACTGACCGTCGAGGGAGTGATGATCGACGTGAC
CGACGACACCTCCATGTAGAGGGCCGCCGAACAGGCTTCAGCCCAGTTCG
GTCGGCTAGACGTCCTCATCAACAACGCCGGAGTGATCTCCGAGGGACGC
TCACCCGAAGGCACCTCCCTCCGCCATACCTGGCAGACTGGCTTCGACAT
CAACATCACGGCCCACGTCATCACTCCAGAAGCCTTTGTGCCGCTCTTGG
AGAAGGCCGCTCTGCCGCTAGTGGTCTTTGTGTCCTCAGCTCTAGGATCA
TGTCCTGGCCGGTTGGACCCCAACGACCAATTTGCTGCCTTCCGATTCCC
CGCCTACCGCAGCACCAAGGTGGCGCTCAACATGGTCGCCTGTCACTATG
CCAATCTATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:532337..532897-

>ASPNIDRAFT_135973-T1 ID=ASPNIDRAFT_135973-T1|Name=ASPNIDRAFT_135973-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1074bp|location=Sequence derived from alignment at ACJE01000013.1:532337..532897- (Aspergillus niger ATCC 1015)
AGGGCCGCCGAACAGGCTTCAGCCCAGTTCGGTCGGCTAGACGTCCTCAT
CAACAACGCCGGAGTGATCTCCGAGGGACGCTCACCCGAAGGCACCTCCC
TCCGCCATACCTGGCAGACTGGCTTCGACATCAACATCACGGCCCACGTC
ATCACTCCAGAAGCCTTTGTGCCGCTCTTGGAGAAGGCCGCTCTGCCGCT
AGTGGTCTTTGTGTCCTCAGCTCTAGGATCATGTCCTGGCCGGTTGGACC
CCAACGACCAATTTGCTGCCTTCCGATTCCCCGCCTACCGCAGCACCAAG
GTGGCGCTCAACATGGTCGCCTGTCACTATGCCAATCTATAGATGGCTTC
TCTCAATAGCACAATCGTCCCTATTACCGGCGCCAACCAGGGTCTAGGCT
TTGCGGTCGCCAAAAAGCTAGCCACCGATCACCCGGGATACCATGTGCTC
ATGGGCTACCGCGATGCTACTAAGGGCGAAGAGGCCATTGCCAAGCTAAA
AAGCCGAGGACTGACCGTCGAGGGAGTGATGATCGACAGGGCCGCCGAAC
AGGCTTCAGCCCAGTTCGGTCGGCTAGACGTCCTCATCAACAACGCCGGA
GTGATCTCCGAGGGACGCTCACCCGAAGGCACCTCCCTCCGCCATACCTG
GCAGACTGGCTTCGACATCAACATCACGGCCCACGTCATCACTCCAGAAG
CCTTTGTGCCGCTCTTGGAGAAGGCCGCTCTGCCGCTAGTGGTCTTTGTG
TCCTCAGCTCTAGGATCATGTCCTGGCCGGTTGGACCCCAACGACCAATT
TGCTGCCTTCCGATTCCCCGCCTACCGCAGCACCAAGGTGGCGCTCAACA
TGGTCGCCTGTCACTATGCCAATCTATAGATGGCTTCTCTCAATAGCACA
ATCGTCCCTATTACCGGCGCCAACCAGGGTCTAGGCTTTGCGGTCGCCAA
AAAGCTAGCCACCGATCACCCGGGATACCATGTGCTCATGGGCTACCGCG
ATGCTACTAAGGGCGAAGAGGCCATTGCCAAGCTAAAAAGCCGAGGACTG
ACCGTCGAGGGAGTGATGATCGAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135973ASPNIDRAFT_135973Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135973-T1ASPNIDRAFT_135973-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135973-T1.cdsASPNIDRAFT_135973-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_135973-T1.exon2ASPNIDRAFT_135973-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_135973-T1.exon1ASPNIDRAFT_135973-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:532337..532897 -
Powered by Drupal